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Lyon, G. J. (April 2015) Variants in TAF1 are associated with a new syndrome with severe intellectual disability and characteristic dysmorphic features. In: 10th International Meeting on Copy Variants and Genes in Intellectual Disability and Autism, Troina, Italy. (Unpublished)
Lyon, Gholson J. (November 2013) Advancing Precision Medicine through clinical grade whole genome sequencing, return of results and deep brain stimulation. In: Precision Medicine: Personal Genomes & Pharmacogenomics, Nov 13th - Nov 16th 2103, Cold Spring Harbor, NY . (Unpublished)
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Lyon, Gholson J. (2013) Genetic and Biochemical Analysis of Childhood-Onset Idiopathic Neuropsychiatric Disorders. In: Institute for Computational Biomedicine and Department of Physiology and Biophysics Seminar Series, Feb 13th 2013, Weill Cornell Medical College, New York, NY. (Unpublished)
Lyon, Gholson J. (2012) Genetics and Genome Sequencing of Childhood-Onset Neuropsychiatric Disorders. In: Department of Psychiatry and Behavioral Science Grand Rounds, Dec 18th 2012, Stony Brook University . (Unpublished)
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Lyon, Gholson J. (November 2014) Human Genetic Variation and the Genotype-Phenotype Problem. In: Lecture to Stony Brook University Psychology Students on "Molecular Psychology", Stony Brook University, Stony Brook, NY . (Unpublished)
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Lyon, Gholson J. (January 2016) A rare genetic “transcriptomopathy” syndrome leading to insights into more common neurologic disorders. In: New York City Wide Human Genetics Meeting 2016, Rockefeller University, New York City, NY. (Unpublished)
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O'Rawe, Jason, Lyon, Gholson J. (October 2014) Large pedigrees in human sequencing studies: toward a more resolved and accurate picture of genetic disease. In: 64th Annual Meeting of the American Society of Human Genetics (ASHG), October 2014, San Diego, California. (Unpublished)
O'Rawe, Jason, Lyon, Gholson J. (November 2014) Large pedigrees in human sequencing studies: toward a more resolved and accurate picture of genetic disease. In: Cold Spring Harbor Laboratory Personal Genomes Meeting, November 2014, Cold Spring Harbor, NY. (Unpublished)
O'Rawe, Jason, Wu, Yiyang, Mittelman, David, Fang, Han, Lyon, Gholson J. (November 2013) Uncovering genetic components of a previously un-described syndrome. In: Cold Spring Harbor Laboratory: Precision Medicine Meeting, November 2013, Cold Spring Harbor, New York. (Unpublished)
Robine, Nicolas, Froeling, Fieke, Hubert, Benjamin, Chu, Timothy, Chandler, Ashlea, Zody, Michael C, Oschwald, Dayna M, Varmus, Harold E, Sawyers, Charles, Tuveson, David (August 2020) Polyethnic-1000: Advancing cancer genomics by studying ethnically diverse, underserved patient populations in New York. In: AACR Annual Meeting.
Rogers, J., Rubin, E., Stewart, D., Stillman, B. (2003) The Genome of Homo Sapiens. In: Cold Spring Harbor Symposia on Quantitative Biology LXVIII: The Genome of Homo Sapiens, Cold Spring Harbor.
Spruck, C. H., Smith, A. P. L., Reed, S. E., Sangfelt, O., Keck, J., Strohmaier, H., Mendez, J., Widschwendter, M., Stillman, B., Zetterberg, A., Reed, S. I. (2005) Deregulation of cyclin E and genomic instability. In: International Symposium on Hormonal Carcinogenesis IV, Valencia, Spain.
Paddison, P. J., Vogt, P. K., eds. (2008) RNA Interference. Curr Top Microbiol Immunol, 320 . Springer Verlag, Berlin; New York. ISBN 978-3-540-75156-4
Klar, A. J., Strathern, J. N., Hicks, J. B. (1984) Developmental Pathways in Yeast. 1984 . CSHL Press.
Wang, D., Pan, E., Fang, G., Kumari, S., He, F., Ware, D., Maslov, S., Gerstein, M. (September 2013) Comparative network analysis of gene co-expression networks reveals the conserved and species-specific functions of cell-wall related genes between arabidopsis and poplar. 2013 4th ACM Conference on Bioinformatics, Computational Biology and Biomedical Informatics, ACM-BCB 2013 . ACM, pp. 689-690. ISBN 9781450324342 (ISBN)
Watson, J. D., Caudy, A. A., Myers, R. M., Witkowski, J. (2006) Recombinant DNA: Genes and Genomes -- a short course. W. H. Freeman & Co., New York. ISBN 9780716728665
Aboukhalil, Robert (March 2016) Elucidating Cancer Evolution using Single-Cell Sequencing and Comparative Genomics. PhD thesis, Cold Spring Harbor Laboratory.
Bekritsky, M. (August 2014) Detecting de novo microsatellite mutations in a population of families with sporadic autism. PhD thesis, Cold Spring Harbor Laboratory.
Calarco, Joseph P. (2013) Chromatin Dynamics during Germline Development. PhD thesis, Cold Spring Harbor Laboratory.
Fregoso, O. I. (February 2010) Elucidating the Functions of Splicing Regulatory Proteins Through the Use of High-Throughput Proteomics. PhD thesis, Cold Spring Harbor Laboratory.
Guzzardo, Paloma M. (April 2013) Identification and characterization of novel components of the Drosophila piRNA pathway. PhD thesis, Cold Spring Harbor Laboratory.
Harris, Benjamin D (October 2021) Atlas level scRNAseq analysis reveals the functional landscape of cell types. PhD thesis, Cold Spring Harbor Laboratory.
Thomas, E. E. (April 2004) Exploring Repetitive Sequences in the Human Genome. PhD thesis, Cold Spring Harbor Laboratory.
Atwal, G. S. (November 2012) Talk from Mickey Atwal at the Cold Spring Harbor Laboratory In-House Symposium (2012). [Video] (Unpublished)
Gillis, J. (November 2012) Talk from Jessie Gillis at the Cold Spring Harbor Laboratory In-House Symposium (2012). [Video] (Unpublished)
Hammell, M. (November 2011) Talk from Molly Hammell at the Cold Spring Harbor Laboratory In-House Symposium (2011). [Video] (Unpublished)
Hannon, G. J. (November 2012) Talk from Greg Hannon at the Cold Spring Harbor Laboratory In-House Symposium (2012). [Video] (Unpublished)
Hicks, J. B. (November 2012) Talk from Jim Hicks at the Cold Spring Harbor Laboratory In-House Symposium (2012). [Video] (Unpublished)
Kinney, J. B. (November 2011) Talk from Justin Kinney at the Cold Spring Harbor Laboratory In-House Symposium (2011). [Video] (Unpublished)
Krainer, A. R. (November 2011) Talk from Adrian Krainer at the Cold Spring Harbor Laboratory In-House Symposium (2011). [Video] (Unpublished)
Krasnitz, A. (November 2012) Talk from Alex Krasnitz at the Cold Spring Harbor Laboratory In-House Symposium (2012). [Video] (Unpublished)
Lyon, Gholson J. (November 2013) Advancing Precision Medicine through clinical grade whole genome sequencing, return of results and deep brain stimulation. [Video] (Unpublished)
Lyon, Gholson J. (November 2012) Talk from Gholson Lyon at the Cold Spring Harbor Laboratory In-House Symposium (2012). [Video] (Unpublished)
McCombie, W. R. (November 2012) Talk from Dick McCombie at the Cold Spring Harbor Laboratory In-House Symposium (2012). [Video] (Unpublished)
O'Rawe, Jason, Fang, Han, Rynearson, Shawn, Robison, Reid J., Kiruluta, Edward S., Higgins, Gerald, Eilbeck, Karen, Reese, Martin G., Lyon, Gholson J. (2013) Supplementary video of subject M.A for Integrating precision medicine in the study and clinical treatment of a severely mentally ill person. PeerJ 1:e177. [Video]
Pappin, D. J. (November 2012) Talk from Darryl Pappin at the Cold Spring Harbor Laboratory In-House Symposium (2012). [Video] (Unpublished)
Schatz, M. C. (November 2012) Talk from Mike Schatz at the Cold Spring Harbor Laboratory In-House Symposium (2012). [Video] (Unpublished)
Sordella, R. (November 2012) Talk from Raffaella Sordella at the Cold Spring Harbor Laboratory In-House Symposium (2012). [Video] (Unpublished)
Stillman, B. (November 2011) Talk from Bruce Stillman at the Cold Spring Harbor Laboratory In-House Symposium (2011). [Video] (Unpublished)
Vakoc, C. R. (November 2012) Talk from Chris Vakoc at the Cold Spring Harbor Laboratory In-House Symposium (2012). [Video] (Unpublished)
Ware, D. H. (November 2011) Talk from Doreen Ware at the Cold Spring Harbor Laboratory In-House Symposium (2011). [Video] (Unpublished)
Wigler, M. H. (November 2011) Talk from Mike Wigler at the Cold Spring Harbor Laboratory In-House Symposium (2011). [Video] (Unpublished)
Gramza, Joyce, Lyon, Gholson J. (2012) Humane Treatment for Patients: How to Handle Genetic Information. [Audio]
Lyon, Gholson J. (December 2013) FDA Crackdown on 23andMe Delays a Revolution in Medicine. [Audio] (Unpublished)
Lyon, Gholson J. (December 2013) "FDA Crackdown on 23ndMe Delays a Revolution in Medicine, says Medical Geneticist, Gholson Lyon". [Audio]
Lyon, Gholson J. (July 2014) "Genetic Research, and its Application in Today's Health Care System". [Audio]
Lyon, Gholson J. (2012) A New Tool for Personal Genomics. [Audio]
Gillis, J., Pavlidis, P. (2013) Cross-validation calculation from "Guilt by Association" Is the Exception Rather Than the Rule in Gene Networks Gillis, J. and Pavlidis, P. (2012) PLoS Computational Biology, 8 (3). [Dataset]
Gillis, J., Pavlidis, P. (2013) Data from "Assessing identity, redundancy and confounds in Gene Ontology annotations over time". [Dataset]
Gillis, J., Pavlidis, P. (2012) Exceptional Edges matrices from "Guilt by Association" Is the Exception Rather Than the Rule in Gene Networks Gillis, J. and Pavlidis, P. (2012) PLoS Computational Biology, 8 (3). [Dataset]
Gillis, J., Pavlidis, P. (2011) Figure data from "The role of indirect connections in gene networks in predicting function" Gillis, J. and Pavlidis, P. (2011) Bioinformatics, 27 (13). pp. 1860-1866. [Dataset]
Gillis, J., Pavlidis, P. (2012) Gene Ontology matrices (with descriptions, IDs, etc) from "Guilt by Association" Is the Exception Rather Than the Rule in Gene Networks. Gillis, J. and Pavlidis, P. (2012) PLoS Computational Biology, 8 (3). [Dataset]
Gillis, J., Pavlidis, P. (2011) Gene Ontology matrices from The role of indirect connections in gene networks in predicting function Gillis, J. and Pavlidis, P. (2011) Bioinformatics, 27 (13). pp. 1860-1866. [Dataset]
Gillis, J., Pavlidis, P. (2012) Gene lists from Gillis, J. and Pavlidis, P. (2012) PLoS Computational Biology, 8 (3). [Dataset]
Gillis, J., Pavlidis, P. (2011) Gene lists from The role of indirect connections in gene networks in predicting function Gillis, J. and Pavlidis, P. (2011) Bioinformatics, 27 (13). pp. 1860-1866. [Dataset]
Gillis, J., Pavlidis, P. (2011) Network data from The role of indirect connections in gene networks in predicting function Gillis, J. and Pavlidis, P. (2011)Bioinformatics, 27 (13). pp. 1860-1866. [Dataset]
Gillis, J., Pavlidis, P. (2013) Use case: The postsynaptic proteome, from "Assessing identity, redundancy and confounds in Gene Ontology annotations over time". [Dataset]
Mistry, M., Gillis, J., Pavlidis, P. (2013) Data and design files for 6 public datasets used in "Genome-wide expression profiling of schizophrenia using a large combined cohort" Mistry, M. and Gillis, J. and Pavlidis, P. (2013) Molecular Psychiatry, 18 (2). pp. 215-225. [Dataset]
Fang, Han, Lyon, Gholson J. (September 2014) Genetic influences on translation in yeast. [Teaching Resource] (Unpublished)
Lyon, Gholson J. (April 2013) Exome and Genome Sequencing. [Teaching Resource] (Unpublished)
Lyon, Gholson J. (May 2013) Exome and Genome Sequencing. [Teaching Resource] (Unpublished)
Lyon, Gholson J. (2016) Human Genetic Variation and the Genotype-Phenotype Problem. [Teaching Resource] (Unpublished)
Lyon, Gholson J. (October 2011) The 2011 William Allan Award of the American Society of Human Genetics to the Right Person "J.M. Opitz"? [Teaching Resource] (Unpublished)
Lyon, Gholson J. (2016) N-terminal acetyltransferases and Translation. [Teaching Resource] (Unpublished)
Fang, Han (January 2014) "Chromosome-scale scaffolding of de novo genome assemblies based on chromatin interactions". Journal Club. (Unpublished)
Fang, Han (August 2013) Finding the sources of missing heritability in a yeast cross. Journal Club. (Unpublished)
Fang, Han (April 2014) "Towards Better Understanding of Artifacts in Variant Calling from High-Coverage Samples". Journal Club. (Unpublished)
Fang, Han, Lyon, Gholson J. (February 2015) Causal signals between codon bias, mRNA structure, and the efficiency of translation and elongation. Journal Club . (Unpublished)
Fang, Han, Lyon, Gholson J. (January 2014) Chromosome-scale scaffolding of de novo genome assemblies based on chromatin interactions. Journal Club. (Unpublished)
Jimenez-Barron, Laura (May 2014) "Quantifying Absolute Protein Synthesis Rates Reveals Principles Underlying Allocation of Cellular Resources". Journal Club. (Unpublished)
Kota, Prashant, Lyon, Gholson J. (January 2014) "The N-Terminal Methionine of Cellular Proteins as a Degradation Signal". Journal Club. (Unpublished)
Levine, Jesse (September 2013) Pluripotent Stem Cells Induced from Mouse Somatic Cells by Small- Molecule Compounds. Journal Club. (Unpublished)
Lyon, Gholson J. (June 2014) "The ARD1 Gene of Yeast Functions in the Switch between the Mitotic Cell Cycle and Alternative Developmental Pathways". Journal Club. (Unpublished)
Lyon, Gholson J. (June 2014) "ARD1 and NAT1 proteins from a complex that has N-terminal acetyltransferase activity". Journal Club. (Unpublished)
Lyon, Gholson J. (April 2015) Association of Protein Biogenesis Factors at the Yeast Ribosomal Tunnel Exit Is Affected by the Translational Status and Nascent Polypeptide Sequence. Journal Club. (Unpublished)
Lyon, Gholson J. (February 2015) Autoacetylation regulates differentially the roles of ARD1 variants in tumorigenesis. Journal Club. (Unpublished)
Lyon, Gholson J. (October 2013) "Control of protein quality and stoichiometries by N-terminal acetylation and the N-end rule pathway". Journal Club. (Unpublished)
Lyon, Gholson J. (February 2015) Different subcellular localizations and functions of human ARD1 variants. Journal Club . (Unpublished)
Lyon, Gholson J. (December 2013) "Epidemiology, epigenetics and the ‘Gloomy Prospect’: embracing randomness in population health research and practice". Journal Club. (Unpublished)
Lyon, Gholson J. (April 2013) Genome Engineering Using CRISPR. Journal Club. (Unpublished)
Lyon, Gholson J. (June 2014) "Genome sequencing identifies major causes of severe intellectual disability". Journal Club. (Unpublished)
Lyon, Gholson J. (June 2015) (Hyper)tension release by N-terminal acetylation / Control of mammalian G protein signaling by N-terminal acetylation and the N-end rule pathway. Journal Club . (Unpublished)
Lyon, Gholson J. (June 2014) "Identification and characterization of genes and mutants for an N-terminal acetyltransferase from yeast". Journal Club. (Unpublished)
Lyon, Gholson J. (June 2014) "Identification of Methionine Na-Acetyltransferase from Saccharomyces cerevisiae". Journal Club. (Unpublished)
Lyon, Gholson J. (February 2015) Massively parallel single-amino-acid mutagenesis. Journal Club. (Unpublished)
Lyon, Gholson J. (June 2014) "Model Peptides Reveal Specificity of Na-Acetyltransferase from Saccharomyces cerevisiae". Journal Club. (Unpublished)
Lyon, Gholson J. (February 2015) The Molecular Basis for Histone H4- and H2A Specific Amino-Terminal Acetylation by NatD. Journal Club . (Unpublished)
Lyon, Gholson J. (June 2014) "Molecular Cloning and Sequencing of a cDNA Encoding Na-Acetyltransferase from Saccharomyces cerevisiae". Journal Club. (Unpublished)
Lyon, Gholson J. (August 2013) Molecular basis for N-terminal acetylation by the heterodimeric NatA complex. Journal Club. (Unpublished)
Lyon, Gholson J. (January 2014) "N(α)-Acetylation of yeast ribosomal proteins and its effect on protein synthesis". Journal Club. (Unpublished)
Lyon, Gholson J. (March 2014) "N-Terminal Acetylation Inhibits Protein Targeting to the Endoplasmic Reticulum". Journal Club. (Unpublished)
Lyon, Gholson J. (February 2015) NAA10 controls osteoblast differentiation and bone formation as a feedback regulator of Runx2. Journal Club . (Unpublished)
Lyon, Gholson J. (June 2014) "NAT2, an Essential Gene Encoding Methionine Na-Acetyltransferase in the Yeast Saccharomyces cerevisiae". Journal Club. (Unpublished)
Lyon, Gholson J. (June 2014) "Na Acetylation Is Required for Normal Growth and Mating of Saccharomyces cerevisiae". Journal Club. (Unpublished)
Lyon, Gholson J. (March 2015) An Organellar Na-Acetyltransferase, Naa60, Acetylates Cytosolic N Termini of Transmembrane Proteins and Maintains Goli Integrity. Journal Club. (Unpublished)
Lyon, Gholson J. (June 2014) "Purification and Characterization of an Na-Acetyltransferase from Saccharomyces cerevisiae". Journal Club. (Unpublished)
Lyon, Gholson J. (January 2015) A Ribosome-Bound Quality Control Complex Triggers Degradation of Nascent Peptides and Signals Translation Stress. Journal Club. (Unpublished)
Lyon, Gholson J. (January 2015) Rqc2p and 60S ribosomal subunits mediate mRNA-independent elongation of nascent chains. Journal Club. (Unpublished)
Lyon, Gholson J. (June 2015) Sporulation in the Budding Yeast Saccharomyces cerevisiae. Journal Club . (Unpublished)
Lyon, Gholson J. (February 2015) Translation inhibitors cause abnormalities in ribosome profiling experiments. Journal Club. (Unpublished)
Lyon, Gholson J. (January 2014) "Whole-genome haplotype reconstruction using proximity-ligation and shotgun sequencing". Journal Club. (Unpublished)
Lyon, Gholson J. (June 2014) "The Yeast ARD1 Gene Product Is Required for Repression of Cryptic Mating-Type Information at the HML Locus". Journal Club. (Unpublished)
Lyon, Gholson J. (April 2015) The principle of antagonism ensures protein targeting specificity at the endoplasmic reticulum. Journal Club. (Unpublished)
Lyon, Gholson J. (November 2013) "The ubiquitin reference technique and tandem fluorescence timers". Journal Club. (Unpublished)
Lyon, Gholson J., Doerfel, Max, O'Rawe, Jason, Wu, Yiyang, Kota, Prashant (2012) Human Genetics and Genomic Medicine. Cold Spring Harbor Laboratory.
Lyon, Gholson J., Doerfel, Max, O'Rawe, Jason, Fang, Han, Jimenez Barron, Laura (2014) Human Genetics and Genomic Medicine. Cold Spring Harbor Laboratory.
Lyon, Gholson J., Doerfel, Max, O'Rawe, Jason, Wu, Yiyang, Fang, Han, Kota, Prashant, Jimenez Barron, Laura (2013) Human Genetics and Genomic Medicine. Cold Spring Harbor Laboratory.
Wu, Yiyang (March 2013) The evolution of MIP technology. Journal Club. (Unpublished)
Wu, Yiyang (January 2014) "A splice donor mutation in NAA10 results in the dysregulation of the retinoic acid signalling pathway and causes Lenz microphthalmia syndrome". Journal Club. (Unpublished)
Wu, Yiyang, Lyon, Gholson J. (January 2014) A splice donor mutation in NAA10 results in the dysregulation of the retinoic acid signalling pathway and causes Lenz microphthalmia syndrome. Journal Club. (Unpublished)