Items where Subject is "DNA replication"

A

Alcorta, D. A., Xiong, Y., Phelps, D., Hannon, G., Beach, D., Barrett, J. C. (November 1996) Involvement of the cyclin-dependent kinase inhibitor p16 (INK4a) in replicative senescence of normal human fibroblasts. Proceedings of the National Academy of Sciences of the United States of America, 93 (24). pp. 13742-13747. ISSN 00278424 (ISSN)

Alexandre, C., Gilman, M. (January 1993) Interaction of Mcm1 with Members of the Kappa-B/Rel Family. Journal of Cellular Biochemistry, 53 (Supple). p. 142. ISSN 0730-2312

Allsopp, R. C., Vaziri, H., Patterson, C., Goldstein, S., Younglai, E. V., Futcher, A. B., Greider, C. W., Harley, C. B. (November 1992) Telomere length predicts replicative capacity of human fibroblasts. Proc Natl Acad Sci U S A, 89 (21). pp. 10114-8. ISSN 0027-8424 (Print)0027-8424 (Linking)

Arrand, J. R., Roberts, R. J. (1979) The nucleotide sequences at the termini of adenovirus-2 DNA. Journal of Molecular Biology, 128 (4). pp. 577-594. ISSN 0022-2836

Auster, A. S., Joshua-Tor, L. (January 2004) The DNA-binding domain of human papillomavirus type 18 E1. Crystal structure, dimerization, and DNA binding. J Biol Chem, 279 (5). pp. 3733-42. ISSN 0021-9258 (Print) (Public Dataset)

Autexier, C., Greider, C. W. (September 1995) Boundary elements of the Tetrahymena telomerase RNA template and alignment domains. Genes Dev, 9 (18). pp. 2227-39. ISSN 0890-9369 (Print)

B

Bazarov, A. V., Jae Lee, W., Bazarov, I., Bosire, M., Hines, W. C., Stankovich, B., Chicas, A., Lowe, S. W., Yaswen, P. (March 2012) The specific role of pRb in p16(INK4A)-mediated arrest of normal and malignant human breast cell. Cell Cycle, 11 (5). ISSN 1551-4005 (Electronic)1551-4005 (Linking)

Bell, S. P., Stillman, B. (May 1992) ATP-dependent recognition of eukaryotic origins of DNA replication by a multiprotein complex. Nature, 357 (6374). pp. 128-34. ISSN 0028-0836 (Print)0028-0836 (Linking)

Bell, S., Li, J., Walter, J. (September 2011) EUKARYOTIC DNA REPLICATION & GENOME MAINTENANCE. In: 2011 meeting on EUKARYOTIC DNA REPLICATION & GENOME MAINTENANCE, September 6–September 10, 2011.

Bell, S. P., Kobayashi, R., Stillman, B. (December 1993) Yeast origin recognition complex functions in transcription silencing and DNA replication. Science, 262 (5141). pp. 1844-9. ISSN 0036-8075 (Print)

Bell, S. P., Marahrens, Y., Rao, H., Stillman, B. (1993) The replicon model and eukaryotic chromosomes. Cold Spring Harbor Symposia on Quantitative Biology, 58. pp. 435-442. ISSN 00917451 (ISSN)

Bell, S. P., Mitchell, J., Leber, J., Kobayashi, R., Stillman, B. (November 1995) The multidomain structure of Orc1p reveals similarity to regulators of DNA replication and transcriptional silencing. Cell, 83 (4). pp. 563-8. ISSN 0092-8674 (Print)

Benoit, M. (April 2020) Glyphosate Resistance Decoded: The Reference Sequence of the Extrachromosomal DNA Replicon in Amaranth. Plant Cell, 32 (7). pp. 2059-2060. ISSN 1040-4651

Berenstein, D., Olesen, K., Speck, C., Skovgaard, O. (May 2002) Genetic organization of the Vibrio harveyi dnaA gene region and analysis of the function of the V-harveyi DnaA protein in Escherichia coli. Journal of Bacteriology, 184 (9). 2533-+. ISSN 0021-9193

Berg, L., Lusky, M., Stenlund, A., Botchan, M. R. (August 1986) Repression of bovine papilloma virus replication is mediated by a virally encoded trans-acting factor. Cell, 46 (5). pp. 753-62. ISSN 0092-8674 (Print)0092-8674 (Linking)

Berg, M., Stenlund, A. (May 1997) Functional interactions between papillomavirus E1 and E2 proteins. J Virol, 71 (5). pp. 3853-63. ISSN 0022-538X (Print)

Bourguignon, G. J., Sweeney, T. K., Delius, H. (1976) Multiple Origins and Circular Structures in Replicating T5-Bacteriophage DNA. Journal of Virology, 18 (1). pp. 245-259.

Brenner, M., Münch, J., Schindler, M., Wildum, S., Stolte, N., Stahl-Hennig, C., Fuchs, D., Mätz-Rensing, K., Franz, M., Heeney, J. L., Ten Haaft, P., Swigut, T., Hrecka, K., Skowronski, J., Kirchhoff, F. (May 2006) Importance of the N-distal AP-2 binding element in Nef for simian immunodeficiency virus replication and pathogenicity in rhesus macaques. Journal of Virology, 80 (9). pp. 4469-4481. ISSN 0022538X

Brill, S. J., Stillman, B. (January 1992) DNA-Replication in Human and Yeast-Cells. Faseb Journal, 6 (1). A538-A538. ISSN 0892-6638

Brill, S. J., Stillman, B. (September 1991) Replication factor-A from Saccharomyces cerevisiae is encoded by three essential genes coordinately expressed at S phase. Genes and Development, 5 (9). pp. 1589-600. ISSN 08909369 (ISSN)

Brill, S. J., Stillman, B. (November 1989) Yeast replication factor-A functions in the unwinding of the SV40 origin of DNA replication. Nature, 342 (6245). pp. 92-5. ISSN 0028-0836

Broach, J. R., Hicks, J. B. (1980) Replication and recombination functions associated with the yeast plasmid, 2μ circle. Cell, 21 (2). pp. 501-508.

Broach, J. R., Li, Y. Y., Feldman, J., Jayaram, M., Abraham, J., Nasmyth, K. A., Hicks, J. B. (1982) Localization and sequence analysis of yeast origins of DNA replication. Cold Spring Harbor Symposia on Quantitative Biology, 47 (2). pp. 1165-1173. ISSN 00917451 (ISSN)

Brown, G. W., Melendy, T., Ray, D. S. (June 1993) Replication Protein-a from the Trypanosomatid Crithidia-Fasciculata Is Inactive in the Primosome Assembly Step of Sv40 DNA-Replication. Molecular and Biochemical Parasitology, 59 (2). pp. 323-325. ISSN 0166-6851

Brown, G. W., Melendy, T. E., Ray, D. S. (November 1992) Conservation of structure and function of DNA replication protein A in the trypanosomatid Crithidia fasciculata. Proc Natl Acad Sci U S A, 89 (21). pp. 10227-31. ISSN 0027-8424 (Print)0027-8424 (Linking)

Brush, G. S., Kelly, T. J., Stillman, B. (1995) Identification of eukaryotic DNA replication proteins using simian virus 40 in vitro replication system. Methods in Enzymology, 262. pp. 522-548. ISSN 00766879 (ISSN)

Buchkovich, K., Duffy, L. A., Harlow, E. (September 1989) The retinoblastoma protein is phosphorylated during specific phases of the cell cycle. Cell, 58 (6). pp. 1097-105. ISSN 1097-4172

Bukhari, A. I., Dubow, M. S., Khatoon, H., Ambrosio, L., Debruijn, F., Ljungquist, E. (1979) Integration of bacteriophage mu DNA. Cold Spring Harb Symp Quant Biol, 43. pp. 1151-8.

Bunz, F., Kobayashi, R., Stillman, B. (December 1993) cDNAs encoding the large subunit of human replication factor C. Proc Natl Acad Sci U S A, 90 (23). pp. 11014-8. ISSN 0027-8424 (Print)

C

Cairns, J. (1973) DNA-Synthesis. British Medical Bulletin, 29 (3). pp. 188-191.

Castel, S. E. (September 2014) Transcriptional regulation in the context of DNA replication by RNA interference in fission yeast. PhD thesis, Cold Spring Harbor Laboratory.

Chen, G., Stenlund, A. (April 1998) Characterization of the DNA-binding domain of the bovine papillomavirus replication initiator E1. J Virol, 72 (4). pp. 2567-76. ISSN 0022-538X (Print)

Chen, G., Stenlund, A. (January 2001) The E1 initiator recognizes multiple overlapping sites in the papillomavirus origin of DNA replication. Journal of Virology, 75 (1). pp. 292-302. ISSN 0022-538X

Chen, G., Stenlund, A. (November 2002) Sequential and ordered assembly of E1 initiator complexes on the papillomavirus origin of DNA replication generates progressive structural changes related to melting. Molecular and Cellular Biology, 22 (21). pp. 7712-7720. ISSN 0270-7306

Chen, G., Stenlund, A. (February 2000) Two patches of amino acids on the E2 DNA binding domain define the surface for interaction with E1. Journal of Virology, 74 (3). pp. 1506-1512. ISSN 0022-538X

Chen, Z. Q., Speck, C., Wendel, P., Tang, C. Y., Stillman, B., Lill, H. L. (July 2008) The architecture of the DNA replication origin recognition complex in Saccharomyces cerevisiae. Proceedings of the National Academy of Sciences of the United States of America, 105 (30). pp. 10326-10331. ISSN 0027-8424

Chiang, C. M., Ustav, M., Stenlund, A., Ho, T. F., Broker, T. R., Chow, L. T. (July 1992) Viral-E1 and Viral-E2 Proteins Support Replication of Homologous and Heterologous Papillomaviral Origins. Proceedings of the National Academy of Sciences of the United States of America, 89 (13). pp. 5799-5803. ISSN 0027-8424

Chong, J. P. J., Hayashi, M. K., Simon, M. N., Xu, R. M., Stillman, B. (February 2000) A double-hexamer archaeal minichromosome maintenance protein is an ATP-dependent DNA helicase. Proceedings of the National Academy of Sciences of the United States of America, 97 (4). pp. 1530-1535. ISSN 0027-8424

Chou, Hsiang-Chen (July 2021) The role of human ORC2 in DNA replication, mitosis and organization of the nucleus. PhD thesis, Cold Spring Harbor Laboratory.

Chou, Hsiang-Chen, Bhalla, Kuhulika, Demerdesh, Osama El, Klingbeil, Olaf, Hanington, Kaarina, Aganezov, Sergey, Andrews, Peter, Alsudani, Habeeb, Chang, Kenneth, Vakoc, Christopher R, Schatz, Michael C, McCombie, W Richard, Stillman, Bruce (February 2021) The human Origin Recognition Complex is essential for pre-RC assembly, mitosis and maintenance of nuclear structure. eLife, 10. ISSN 2050-084X

Concia, L., Brooks, A. M., Wheeler, E., Zynda, G. J., Wear, E. E., LeBlanc, C., Song, J., Lee, T. J., Pascuzzi, P. E., Martienssen, R. A., Vaughn, M. W., Thompson, W. F., Hanley-Bowdoin, L. (March 2018) Genome-Wide Analysis of the Arabidopsis Replication Timing Program. Plant Physiol, 176 (3). pp. 2166-2185. ISSN 0032-0889

Cullmann, G., Fien, K., Kobayashi, R., Stillman, B. (September 1995) Characterization of the five replication factor C genes of Saccharomyces cerevisiae. Molecular and Cellular Biology, 15 (9). pp. 4661-71. ISSN 0270-7306

Cuvier, O., Hirano, T. (March 2003) A role of topoisomerase II in linking DNA replication to chromosome condensation. Journal of Cell Biology, 160 (5). pp. 645-655. ISSN 0021-9525

D

D'Urso, G., Marraccino, R. L., Marshak, D. R., Roberts, J. M. (November 1990) Cell cycle control of DNA replication by a homologue from human cells of the p34cdc2 protein kinase. Science, 250 (4982). pp. 786-91. ISSN 0036-8075 (Print)0036-8075 (Linking)

Diffley, J. F., Stillman, B. (May 1986) Purification of a cellular, double-stranded DNA-binding protein required for initiation of adenovirus DNA replication by using a rapid filter-binding assay. Molecular and Cellular Biology, 6 (5). pp. 1363-73. ISSN 0270-7306

Diffley, J. F., Stillman, B. (April 1988) Purification of a yeast protein that binds to origins of DNA replication and a transcriptional silencer. Proceedings of the National Academy of Sciences of the United States of America, 85 (7). pp. 2120-4. ISSN 0027-8424

Diffley, J. F., Stillman, B. (November 1989) Similarity between the transcriptional silencer binding proteins ABF1 and RAP1. Science, 246 (4933). pp. 1034-8. ISSN 0036-8075

Diffley, J. F., Stillman, B. (September 1991) A close relative of the nuclear, chromosomal high-mobility group protein HMG1 in yeast mitochondria. Proceedings of the National Academy of Sciences of the United States of America, 88 (17). pp. 7864-8. ISSN 0027-8424

Diffley, J. F. X., Stillman, B. (1992) ARS binding factors from Saccharomyces cerevisiae. In: DNA replication : the regulatory mechanisms. Springer-Verlag, Berlin, pp. 215-227. ISBN 0387546332

Diffley, J. F. X., Stillman, B. (1990) Ars Binding Factors in DNA Replication and Transcriptional Silencing. Yeast, 6 (SPEC. ). S12.

Diffley, J. F. X., Stillman, B. (December 1990) The Initiation of Chromosomal DNA Replication in Eukaryotes. Trends in Genetics, 6 (12). pp. 427-432. ISSN 0168-9525

Diffley, J. F. X., Stillman, B. (1988) Interactions between Purified Cellular Proteins and Yeast Origins of DNA Replication. In: Eukaryotic DNA replication. Cancer cells, 6 . Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, pp. 235-244. ISBN 0879693088

Diffley, J. F. X., Stillman, B. W. (1986) Characterization of Protein Which Binds Specifically to a Putative Origin of Cellular DNA-Replication. Journal of Cellular Biochemistry, 32 (S10B). p. 229. ISSN 0730-2312

Din, S., Brill, S. J., Fairman, M. P., Stillman, B. (June 1990) Cell-cycle-regulated phosphorylation of DNA replication factor A from human and yeast cells. Genes Dev, 4 (6). pp. 968-77. ISSN 0890-9369

Dokshin, G. A., Davis, G. M., Sawle, A. D., Eldridge, M. D., Nicholls, P. K., Gourley, T. E., Romer, K. A., Molesworth, L. W., Tatnell, H. R., Ozturk, A. R., de Rooij, D. G., Hannon, G. J., Page, D. C., Mello, C. C., Carmell, M. A. (December 2019) GCNA Interacts with Spartan and Topoisomerase II to Regulate Genome Stability. Dev Cell. ISSN 1534-5807 (Public Dataset)

Du, Y. C. N., Stillman, B. (June 2002) Yph1p, an ORC-interacting protein: Potential links between cell proliferation control, DNA replication, and ribosome biogenesis. Cell, 109 (7). pp. 835-848. ISSN 0092-8674

Dutta, A., Stillman, B. (June 1992) cdc2 family kinases phosphorylate a human cell DNA replication factor, RPA, and activate DNA replication. Embo J, 11 (6). pp. 2189-99. ISSN 0261-4189 (Print)

E

Ekholm-Reed, S., Mendez, J., Tedesco, D., Zetterberg, A., Stillman, B., Reed, S. I. (June 2004) Deregulation of cyclin E in human cells interferes with prereplication complex assembly. Journal of Cell Biology, 165 (6). pp. 789-800. ISSN 0021-9525

Ellison, V., Stillman, B. (November 2003) Biochemical characterization of DNA damage checkpoint complexes: Clamp loader and clamp complexes with specificity for 5' recessed DNA. Plos Biology, 1 (2). pp. 231-243. ISSN 1544-9173

Ellison, V., Stillman, B. (September 2001) Opening of the clamp: An intimate view of an ATP-driven biological machine. Cell, 106 (6). pp. 655-660. ISSN 0092-8674

Ellison, V., Stillman, B. (March 1998) Reconstitution of recombinant human replication factor C (RFC) and identification of an RFC subcomplex possessing DNA-dependent ATPase activity. Journal of Biological Chemistry, 273 (10). pp. 5979-87. ISSN 0021-9258

Enemark, E. J., Chen, G., Vaughn, D. E., Stenlund, A., Joshua-Tor, L. (July 2000) Crystal structure of the DNA binding domain of the replication initiation protein E1 from papillomavirus. Molecular Cell, 6 (1). pp. 149-158. ISSN 1097-2765 (Public Dataset)

Enemark, E. J., Stenlund, A., Joshua-Tor, L. (March 2002) Crystal structures of two intermediates in the assembly of the papillomavirus replication initiation complex. Embo Journal, 21 (6). pp. 1487-1496. ISSN 0261-4189 (Public Dataset)

Evrin, C., Clarke, P., Zech, J., Lurz, R., Sun, J. C., Uhle, S., Li, H. L., Stillman, B., Speck, C. (December 2009) A double-hexameric MCM2-7 complex is loaded onto origin DNA during licensing of eukaryotic DNA replication. Proceedings of the National Academy of Sciences of the United States of America, 106 (48). pp. 20240-20245. ISSN 0027-8424

F

Fahy, E., Barringer, K. J., Kwoh, D. Y., Prodanovich, P., Gingeras, T. R. (1996) The self-sustained sequence replication (3SR) reaction and its application to the detection of mutations associated with Zidovudine resistance in HIV-1. In: PCR Protocols and Applications: Laboratory Manual. Academic Press, New York. ISBN 9780080886718

Fairman, M., Prelich, G., Tsurimoto, T., Stillman, B. (December 1988) Identification of cellular components required for SV40 DNA replication in vitro. Biochim Biophys Acta, 951 (2-3). pp. 382-7. ISSN 0006-3002

Fairman, M. P., Prelich, G., Stillman, B. (December 1987) Identification of multiple cellular factors required for SV40 replication in vitro. Philos Trans R Soc Lond B Biol Sci, 317 (1187). pp. 495-505. ISSN 0962-8436

Fairman, M. P., Prelich, G., Tsurimoto, T., Stillman, B. (1988) Characterization of Cellular Proteins Required for Sv40 DNA Replication in-Vitro. In: Eukaryotic DNA replication. Cancer Cells, 6 . Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, pp. 143-152. ISBN 0879693088

Fairman, M. P., Prelich, G., Tsurimoto, T., Stillman, B. (1989) Replication of SV40 in vitro using proteins derived from a human cell extract. J Cell Sci Suppl, 12. pp. 161-9. ISSN 0269-3518

Fairman, M. P., Stillman, B. (April 1988) Cellular factors required for multiple stages of SV40 DNA replication in vitro. Embo Journal, 7 (4). pp. 1211-8. ISSN 0261-4189

Feng, Xiang, Noguchi, Yasunori, Barbon, Marta, Stillman, Bruce, Speck, Christian, Li, Huilin (June 2021) The structure of ORC–Cdc6 on an origin DNA reveals the mechanism of ORC activation by the replication initiator Cdc6. Nature Communications, 12 (1). ISSN 2041-1723

Fien, K., Stillman, B. (January 1992) Identification of replication factor C from Saccharomyces cerevisiae: a component of the leading-strand DNA replication complex. Molecular and Cellular Biology, 12 (1). pp. 155-63. ISSN 0270-7306

Funk, J. O., Waga, S., Harry, J. B., Espling, E., Stillman, B., Galloway, D. A. (August 1997) Inhibition of CDK activity and PCNA-dependent DNA replication by p21 is blocked by interaction with the HPV-16 E7 oncoprotein. Genes and Development, 11 (16). pp. 2090-2100. ISSN 08909369 (ISSN)

G

Gavin, K. A., Hidaka, M., Stillman, B. (December 1995) Conserved initiator proteins in eukaryotes. Science, 270 (5242). pp. 1667-71. ISSN 0036-8075 (Print) (Public Dataset)

Ghosh, S. S., Fahy, E., Gingeras, T. R. (1995) 13 - The Self-Sustained Sequence Replication Reaction and Its Application in Clinical Diagnostics and Molecular Biology. In: Molecular Methods for Virus Detection. Academic Press, San Diego, pp. 287-314. ISBN 978-0-12-748920-9

Ghosh, S. S., Fahy, E., Gingeras, T. R. (1995) The self-sustained sequence replication (3SR) reaction: Its practice and applications. In: Molecular Methods for Virus Detection. Academic Press, San Diego, pp. 287-313. ISBN 9780080536897

Gillitzer, E., Chen, G., Stenlund, A. (June 2000) Separate domains in E1 and E2 proteins serve architectural and productive roles for cooperative DNA binding. Embo Journal, 19 (12). pp. 3069-3079. ISSN 0261-4189

Gingeras, T. R., Biery, M., Goulden, M., Ghosh, S. S., Fahy, E. (1995) Optimization and Characterization of 3SR-based Assays. In: PCR primer: a laboratory manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, pp. 653-666. ISBN 9780879694487

Gingeras, T. R., Whitfield, K. M., Kwoh, D. Y. (1990) Unique features of the self-sustained sequence replication (3SR) reaction in the in vitro amplification of nucleic acids. Annales de Biologie Clinique, 48 (7). pp. 498-501. ISSN 00033898 (ISSN)

Gluzman, Y., Sambrook, J. F., Frisque, R. J. (1980) Expression of Early Genes of Origin-Defective Mutants of Simian-Virus-40. Proceedings of the National Academy of Sciences of the United States of America-Biological Sciences, 77 (7). pp. 3898-3902.

Grand, R. S., Martienssen, R., O'Sullivan, J. M. (May 2014) Potential roles for interactions between the mitochondrial and nuclear DNA throughout the cell cycle of Schizosaccharomyces pombe. Mitochondrion, 17. pp. 141-9. ISSN 1567-7249

Grodzicker, T., Spector, D. L., Stewart, D., Stillman, B. (June 2010) Nuclear Organization & Function. In: Cold Spring Harbor Symposia on Quantitative Biology LXXV: Nuclear Organization and Function, June 2–June 7, 2010.

Guggenheimer, R. A., Stillman, B. W., Nagata, K., Tamanoi, F., Hurwitz, J. (1984) DNA-Sequences Required for the Invitro Replication of Adenovirus DNA. Proceedings of the National Academy of Sciences of the United States of America-Biological Sciences, 81 (10). pp. 3069-3073. ISSN 0027-8424

H

Heintz, N. H., Stillman, B. W. (May 1988) Nuclear-DNA Synthesis Invitro Is Mediated Via Stable Replication Forks Assembled in a Temporally Specific Fashion In vivo. Molecular and Cellular Biology, 8 (5). pp. 1923-1931. ISSN 0270-7306

Henderson, S., Allsopp, R., Spector, D., Wang, S. S., Harley, C. (July 1996) In situ analysis of changes in telomere size during replicative aging and cell transformation. Journal of Cell Biology, 134 (1). pp. 1-12. ISSN 0021-9525 (Print)0021-9525

Hirano, T. (February 2005) Cell biology - Holding sisters for repair. Nature, 433 (7025). pp. 467-468. ISSN 0028-0836

Hoek, M., Myers, M. P., Stillman, B. (January 2011) An analysis of CAF-1 interacting proteins reveals dynamic and direct interactions with the ku complex and 14-3-3 proteins. Journal of Biological Chemistry, 286 (12). pp. 10876-10887. ISSN 0021-9258

Hofmann, J. F., Beach, D. (January 1994) cdt1 is an essential target of the Cdc10/Sct1 transcription factor: requirement for DNA replication and inhibition of mitosis. Embo J, 13 (2). pp. 425-34. ISSN 0261-4189 (Print)

Holmes, A., Roseaulin, L., Schurra, C., Waxin, H., Lambert, S., Zaratiegui, M., Martienssen, R. A., Arcangioli, B. (December 2012) Lsd1 and Lsd2 Control Programmed Replication Fork Pauses and Imprinting in Fission Yeast. Cell Reports, 2 (6). pp. 1513-1520. ISSN 2211-1247

Hossain, M., Stillman, B. (July 2016) Opposing roles for DNA replication initiator proteins ORC1 and CDC6 in control of Cyclin E gene transcription. Elife, 5. ISSN 2050-084X (Electronic)2050-084X (Linking) (Public Dataset)

Hossain, Manzar, Bhalla, Kuhulika, Stillman, Bruce (June 2019) Cyclin binding Cy motifs have multiple activities in the initiation of DNA replication. bioRxiv. (Unpublished)

Hossain, Manzar, Bhalla, Kuhulika, Stillman, Bruce (March 2021) Multiple, short protein binding motifs in ORC1 and CDC6 control the initiation of DNA replication. Molecular Cell. ISSN 1097-2765

Hu, J., Levin, P., Winkler, M. (August 2010) MOLECULAR GENETICS OF BACTERIA & PHAGES. In: 2010 meeting of MOLECULAR GENETICS OF BACTERIA & PHAGES, August 24–August 28, 2010, Cold Spring Harbor Laboratory.

Hu, Y, Tareen, A, Sheu, Y-J, Ireland, WT, Speck, C, Li, H, Joshua-Tor, L, Kinney, JB, Stillman, B (July 2020) Evolution of DNA Replication Origin Specification and Gene Silencing Mechanisms. BioRxiv. (Unpublished)

Hu, Y, Tareen, A., Sheu, Y. J., Ireland, W. T., Speck, C., Li, H., Joshua-Tor, L., Kinney, J. B., Stillman, B. (October 2020) Evolution of DNA replication origin specification and gene silencing mechanisms. Nature Communications, 11 (1). p. 5175. ISSN 2041-1723

Hu, Yixin, Stillman, Bruce (January 2023) Origins of DNA replication in eukaryotes. Molecular Cell. S1097-2765(22)01203. ISSN 1097-2765

J

Jacob, Y., Bergamin, E., Donoghue, M. T., Mongeon, V., LeBlanc, C., Voigt, P., Underwood, C. J., Brunzelle, J. S., Michaels, S. D., Reinberg, D., Couture, J. F., Martienssen, R. A. (March 2014) Selective methylation of histone H3 variant H3.1 regulates heterochromatin replication. Science, 343 (6176). pp. 1249-53. ISSN 0036-8075

Jaremko, M. J., On, K. F., Thomas, D. R., Stillman, B., Joshua-Tor, L. (August 2020) The dynamic nature of the human origin recognition complex revealed through five cryoEM structures. Elife, 9. e58622. ISSN 2050-084x

Jeon, Y., Bekiranov, S., Karnani, N., Kapranov, P., Ghosh, S., MacAlpine, D., Lee, C., Deog, S. H., Gingeras, T. R., Dutta, A. (2005) Temporal profile of replication of human chromosomes. Proceedings of the National Academy of Sciences of the United States of America, 102 (18). pp. 6419-6424. ISSN 00278424 (ISSN)

K

Kamakaka, R. T., Bulger, M., Kaufman, P. D., Stillman, B., Kadonaga, J. T. (March 1996) Postreplicative chromatin assembly by Drosophila and human chromatin assembly factor 1. Molecular and Cellular Biology, 16 (3). pp. 810-817. ISSN 0270-7306

Kamakaka, R. T., Kaufman, P. D., Stillman, B., Mitsis, P. G., Kadonaga, J. T. (August 1994) Simian virus 40 origin- and T-antigen-dependent DNA replication with Drosophila factors in vitro. Molecular and Cellular Biology, 14 (8). pp. 5114-22. ISSN 0270-7306

Kapranov, P., Sementchenko, V. I., Gingeras, T. R. (April 2003) Beyond expression profiling: next generation uses of high density oligonucleotide arrays. Briefings in Functional Genomics & Proteomics, 2 (1). pp. 47-56. ISSN 1473-9550 (Print)1473-9550

Kara, N., Hossain, M., Prasanth, S. G., Stillman, B. (May 2015) Orc1 Binding to Mitotic Chromosomes Precedes Spatial Patterning During G1 Phase and Assembly of the Origin Recognition Complex in Human Cells. J Biol Chem, 290 (19). pp. 12355-12369. ISSN 0021-9258

Kaufman, P. D., Botchan, M. R. (April 1994) Assembly of nucleosomes: do multiple assembly factors mean multiple mechanisms? Curr Opin Genet Dev, 4 (2). pp. 229-35. ISSN 0959-437X (Print)

Kaufman, P. D., Kobayashi, R., Kessler, N., Stillman, B. (June 1995) The p150 and p60 subunits of chromatin assembly factor I: a molecular link between newly synthesized histones and DNA replication. Cell, 81 (7). pp. 1105-14. ISSN 0092-8674 (Print)

Kessler, M., Mathews, M. B. (November 1991) Tat transactivation of the human immunodeficiency virus type 1 promoter is influenced by basal promoter activity and the simian virus 40 origin of DNA replication. Proc Natl Acad Sci U S A, 88 (22). pp. 10018-22. ISSN 0027-8424 (Print)0027-8424 (Linking)

Klar, A. J. S., Bonaduce, M. J., Cafferkey, R. (March 1991) The mechanism of fission yeast mating type interconversion: seal/replicate/cleave model of replication across the double-stranded break site at mat1. Genetics, 127 (3). pp. 489-496. ISSN 0016-6731

Klar, A. J. S. (March 1980) Mating-Type Functions for Meiosis and Sporulation in Yeast Act through Cytoplasm. Genetics, 94 (3). pp. 597-605.

Klessig, D. F., Quinlan, M. P., Grodzicker, T. (1982) Proteins Containing Only Half of the Coding Information of Early Region 1b of Adenovirus Are Functional in Human-Cells Transformed with the Herpes-Simplex Virus Type-1 Thymidine Kinase Gene and Adenovirus Type-2 DNA. Journal of Virology, 41 (2). pp. 423-434.

Kneissig, M., Keuper, K., de Pagter, M. S., van Roosmalen, M. J., Martin, J., Otto, H., Passerini, V., Campos Sparr, A., Renkens, I., Kropveld, F., Vasudevan, A., Sheltzer, J. M., Kloosterman, W. P., Storchova, Z. (November 2019) Micronuclei-based model system reveals functional consequences of chromothripsis in human cells. Elife, 8. e50292. ISSN 2050-084x (Public Dataset)

Knott, S. R., Viggiani, C. J., Aparicio, O. M. (August 2009) To promote and protect: coordinating DNA replication and transcription for genome stability. Epigenetics, 4 (6). pp. 362-5. ISSN 1559-2294

Knott, S. R., Viggiani, C. J., Tavare, S., Aparicio, O. M. (May 2009) Genome-wide replication profiles indicate an expansive role for Rpd3L in regulating replication initiation timing or efficiency, and reveal genomic loci of Rpd3 function in Saccharomyces cerevisiae. Genes Dev, 23 (9). pp. 1077-90. ISSN 0890-9369

Koh, S. B., Mascalchi, P., Rodriguez, E., Lin, Y., Jodrell, D. I., Richards, F. M., Lyons, S. K. (January 2017) A quantitative FastFUCCI assay defines cell cycle dynamics at a single-cell level. J Cell Sci, 130 (2). pp. 512-520. ISSN 0021-9533

L

Laipis, P. J., Sen, A., Levine, A. J., Mulder, C. (1975) DNA-Replication in Sv40 Infected-Cells .10. Structure of 16 S Gap Circle Intermediate in Sv40 DNA-Synthesis. Virology, 68 (1). pp. 115-123.

Lee, S. J., Syed, S., Enemark, E. J., Schuck, S., Stenlund, A., Ha, T., Joshua-Tor, L. (March 2014) Dynamic look at DNA unwinding by a replicative helicase. Proceedings of the National Academy of Sciences of the United States of America, 111 (9). E827-35. ISSN 0027-8424

Lee, T. J., Pascuzzi, P. E., Settlage, S. B., Shultz, R. W., Tanurdzic, M., Rabinowicz, P. D., Menges, M., Zheng, P., Main, D., Murray, J. A. H., Sosinski, B., Allen, G. C., Martienssen, R. A., Hanley-Bowdoin, L., Vaughn, M. W., Thompson, W. F. (June 2010) Arabidopsis thaliana chromosome 4 replicates in two phases that correlate with chromatin state. Plos Genetics, 6 (6). pp. 1-18.

Levy, M. Z., Allsopp, R. C., Futcher, A. B., Greider, C. W., Harley, C. B. (June 1992) Telomere end-replication problem and cell aging. J Mol Biol, 225 (4). pp. 951-60. ISSN 0022-2836 (Print)0022-2836 (Linking)

Li, F., Martienssen, R. A., Cande, W. Z. (July 2011) Coordination of DNA replication and histone modification by the Rik1-Dos2 complex. Nature, 475 (7355). 244-U2562. ISSN 0028-0836 (Public Dataset)

Li, Q., Fazly, A. M., Zhou, H., Huang, S., Zhang, Z., Stillman, B. (October 2009) The elongator complex interacts with PCNA and modulates transcriptional silencing and sensitivity to DNA damage agents. Plos Genetics, 5 (10). e1000684. ISSN 1553-7390

Li, R., Waga, S., Hannon, G. J., Beach, D., Stillman, B. (1994) Differential effects by the p21 CDK inhibitor on PCNA-dependent DNA replication and repair. Nature, 371 (6497). pp. 534-537. ISSN 00280836 (ISSN)

Li, R., Yu, D. S., Tanaka, M., Zheng, L., Berger, S. L., Stillman, B. (March 1998) Activation of Chromosomal DNA Replication in Saccharomyces cerevisiae by Acidic Transcriptional Activation Domains. Molecular and Cellular Biology, 18 (3). pp. 1296-1302. ISSN 0270-7306

Li, Rong, Hannon, G. J., Beach, D., Stillman, B. (1996) Subcellular distribution of p21 and PCNA in normal and repair-deficient cells following DNA damage. Current Biology, 6 (2). pp. 189-199. ISSN 09609822 (ISSN)

Liang, C., Stillman, B. (December 1997) Persistent initiation of DNA replication and chromatin-bound MCM proteins during the cell cycle in cdc6 mutants. Genes and Development, 11 (24). pp. 3375-86. ISSN 08909369 (ISSN)

Liang, C., Weinreich, M., Stillman, B. (June 1995) ORC and Cdc6p interact and determine the frequency of initiation of DNA replication in the genome. Cell, 81 (5). pp. 667-76. ISSN 0092-8674 (Print)

Liu, X., Stenlund, A. (February 2010) Mutations in Sensor 1 and Walker B in the bovine papillomavirus E1 initiator protein mimic the nucleotide bound state. Journal of Virology, 84 (4). pp. 1912-1919. ISSN 0022-538X

Ljungquist, E., Bukhari, A. I. (1979) Behavior of bacteriophage Mu DNA upon infecton of Escherichia coli cells. Journal of Molecular Biology, 133 (3). pp. 339-357. ISSN 0022-2836

Luckow, B., Bunz, F., Stillman, B., Lichter, P., Schutz, G. (March 1994) Cloning, Expression, and Chromosomal Localization of the 140-Kilodalton Subunit of Replication Factor-C from Mice and Humans. Molecular and Cellular Biology, 14 (3). pp. 1626-1634. ISSN 0270-7306

Lydeard, J. R., Lipkin-Moore, Z., Sheu, Y. J., Stillman, B., Burgers, P. M., Haber, J. E. (2010) Break-induced replication requires all essential DNA replication factors except those specific for pre-RC assembly. Genes and Development, 24 (11). pp. 1133-1144.

M

Marahrens, Y., Stillman, B. (July 1994) Replicator dominance in a eukaryotic chromosome. Embo Journal, 13 (14). pp. 3395-400. ISSN 0261-4189

Marahrens, Y., Stillman, B. (1996) The initiation of DNA replication in the yeast Saccharomyces cerevisiae. In: Eukaryotic DNA replication. Frontiers in molecular biology, 15 . Oxford University Press, Cambridge, UK, pp. 66-95. ISBN 978-0-19-963585-6

Marahrens, Y., Stillman, B. (February 1992) A yeast chromosomal origin of DNA replication defined by multiple functional elements. Science, 255 (5046). pp. 817-23. ISSN 0036-8075 (Print)

Matsukawa, Toshihiro, Yin, Mianmian, Baslan, Timour, Chung, Yang Jo, Cao, Dengchao, Bertoli, Ryan, Zhu, Yuelin J, Walker, Robert L, Freeland, Amy, Knudsen, Erik, Lowe, Scott W, Meltzer, Paul S, Aplan, Peter D (September 2022) Mcm2 hypomorph leads to acute leukemia or hematopoietic stem cell failure, dependent on genetic context. The FASEB Journal, 36 (9). e22430. ISSN 0892-6638

Matsumoto, T., Beach, D. (July 1991) Premature initiation of mitosis in yeast lacking RCC1 or an interacting GTPase. Cell, 66 (2). pp. 347-60. ISSN 0092-8674 (Print)0092-8674 (Linking)

Maulbecker, C., Mohr, I., Gluzman, Y., Bartholomew, J., Botchan, M. (April 1992) A deletion in the simian virus 40 large T antigen impairs lytic replication in monkey cells in vivo but enhances DNA replication in vitro: new complementation function of T antigen. J Virol, 66 (4). pp. 2195-207. ISSN 0022-538X (Print)0022-538X (Linking)

Mazurek, A., Luo, W., Krasnitz, A., Hicks, J., Powers, R. S., Stillman, B. (2012) DDX5 regulates DNA replication and is required for cell proliferation in a subset of breast cancer cells. Cancer Discovery, 2 (9). pp. 812-825. ISSN 21598274 (ISSN)

McJunkin, K., Mazurek, A., Premsrirut, P. K., Zuber, J., Dow, L. E., Simon, J., Stillman, B., Lowe, S. W. (April 2011) Reversible suppression of an essential gene in adult mice using transgenic RNA interference. Proceedings of the National Academy of Sciences of the United States of America, 108 (17). pp. 7113-7118. ISSN 0027-8424

McVey, D., Brizuela, L., Mohr, I., Marshak, D. R., Gluzman, Y., Beach, D. (October 1989) Phosphorylation of large tumour antigen by cdc2 stimulates SV40 DNA replication. Nature, 341 (6242). pp. 503-7. ISSN 1476-4687

Melendy, T., Sedman, J., Stenlund, A. (December 1995) Cellular factors required for papillomavirus DNA replication. J Virol, 69 (12). pp. 7857-67. ISSN 0022-538X (Print)

Melendy, T., Stillman, B. (January 1991) Purification of DNA polymerase delta as an essential simian virus 40 DNA replication factor. Journal of Biological Chemistry, 266 (3). pp. 1942-9. ISSN 0021-9258

Melendy, T., Stillman, B. (1992) SV40 DNA Replication. In: Nucleic Acids Research. Oxford Academic, pp. 129-158.

Melendy, T., Stillman, B. (February 1993) An interaction between replication protein A and SV40 T antigen appears essential for primosome assembly during SV40 DNA replication. J Biol Chem, 268 (5). pp. 3389-95. ISSN 0021-9258 (Print)

Mendez, J., Stillman, B. (December 2003) Perpetuating the double helix: molecular machines at eukaryotic DNA replication origins. Bioessays, 25 (12). pp. 1158-1167. ISSN 0265-9247

Mendez, J., Zou-Yang, X. H., Kim, S. Y., Hidaka, M., Tansey, W. P., Stillman, B. (March 2002) Human origin recognition complex large subunit is degraded by ubiquitin-mediated proteolysis after initiation of DNA replication. Molecular Cell, 9 (3). pp. 481-491. ISSN 1097-2765

Merkle, T., Haizel, T., Matsumoto, T., Harter, K., Dallmann, G., Nagy, F. (October 1994) Phenotype of the Fission Yeast-Cell Cycle Regulatory Mutant Pim1-46 Is Suppressed by a Tobacco Cdna-Encoding a Small, Ran-Like Gtp-Binding Protein. Plant Journal, 6 (4). pp. 555-565. ISSN 0960-7412

Mizushima, T., Takahashi, N., Stillman, B. (July 2000) Cdc6p modulates the structure and DNA binding activity of the origin recognition complex in vitro. Genes & Development, 14 (13). pp. 1631-1641. ISSN 0890-9369

Mohr, I. J., Fairman, M. P., Stillman, B., Gluzman, Y. (October 1989) Large T-antigen mutants define multiple steps in the initiation of simian virus 40 DNA replication. Journal of Virology, 63 (10). pp. 4181-8. ISSN 0022-538X

Mohr, I. J., Gluzman, Y., Fairman, M. P., Strauss, M., McVey, D., Stillman, B., Gerard, R. D. (September 1989) Production of simian virus 40 large tumor antigen in bacteria: altered DNA-binding specificity and dna-replication activity of underphosphorylated large tumor antigen. Proceedings of the National Academy of Sciences of the United States of America, 86 (17). pp. 6479-83. ISSN 0027-8424

Moore, J. E., Purcaro, M. J., Pratt, H. E., Epstein, C. B., Shoresh, N., Adrian, J., Kawli, T., Davis, C. A., Dobin, A., Kaul, R., Halow, J., Van Nostrand, E. L., Freese, P., Gorkin, D. U., Shen, Y., He, Y., Mackiewicz, M., Pauli-Behn, F., Williams, B. A., Mortazavi, A., Keller, C. A., Zhang, X. O., Elhajjajy, S. I., Huey, J., Dickel, D. E., Snetkova, V., Wei, X., Wang, X., Rivera-Mulia, J. C., Rozowsky, J., Zhang, J., Chhetri, S. B., Zhang, J., Victorsen, A., White, K. P., Visel, A., Yeo, G. W., Burge, C. B., Lécuyer, E., Gilbert, D. M., Dekker, J., Rinn, J., Mendenhall, E. M., Ecker, J. R., Kellis, M., Klein, R. J., Noble, W. S., Kundaje, A., Guigó, R., Farnham, P. J., Cherry, J. M., Myers, R. M., Ren, B., Graveley, B. R., Gerstein, M. B., Pennacchio, L. A., Snyder, M. P., Bernstein, B. E., Wold, B., Hardison, R. C., Gingeras, T. R., Stamatoyannopoulos, J. A., Weng, Z. (July 2020) Expanded encyclopaedias of DNA elements in the human and mouse genomes. Nature, 583 (7818). pp. 699-710. ISSN 0028-0836 (Print)0028-0836

Murzina, N., Verreault, A., Laue, E., Stillman, B. (1999) Heterochromatin Dynamics in Mouse Cells: Interaction between Chromatin Assembly Factor 1 and HP1 Proteins. Molecular Cell, 4 (4). pp. 529-540.

N

Nahreini, P., Mathews, M. B. (February 1995) Effects of the simian virus 40 origin of replication on transcription from the human immunodeficiency virus type 1 promoter. J Virol, 69 (2). pp. 1296-301. ISSN 0022-538X (Print)

Nakano, S., Stillman, B., Horvitz, H. R. (2011) Replication-coupled chromatin assembly generates a neuronal bilateral asymmetry in C. elegans. Cell, 147 (7). pp. 1525-1536. ISSN 00928674 (ISSN)

Neuwald, Andrew F. (2005) Evolutionary clues to eukaryotic DNA clamp-loading mechanisms: analysis of the functional constraints imposed on replication factor C AAA+ ATPases. Nucleic Acids Res, 33 (11). pp. 3614-28. ISSN 1362-4962 (Electronic)

Neuwald, A. F. (July 2006) Hypothesis: bacterial clamp loader ATPase activation through DNA-dependent repositioning of the catalytic base and of a trans-acting catalytic threonine. Nucleic Acids Res, 34 (18). pp. 5280-90. ISSN 1362-4962 (Electronic)

Ni, T. H., McDonald, W. F., Zolotukhin, I., Melendy, T., Waga, S., Stillman, B., Muzyczka, N. (April 1998) Cellular proteins required for adeno-associated virus DNA replication in the absence of adenovirus coinfection. Journal of Virology, 72 (4). pp. 2777-87. ISSN 0022-538X

Noguchi, Y., Yuan, Z., Bai, L., Schneider, S., Zhao, G., Stillman, B., Speck, C., Li, H. (November 2017) Cryo-EM structure of Mcm2-7 double hexamer on DNA suggests a lagging-strand DNA extrusion model. Proc Natl Acad Sci U S A, 114 (45). E9529-9538. ISSN 0027-8424

O

O'Donnell, M., Langston, L., Stillman, B. (July 2013) Principles and concepts of DNA replication in bacteria, archaea, and eukarya. Cold Spring Harbor Perspectives in Biology, 5 (7). ISSN 19430264

O'Keefe, R. T., Henderson, S. C., Spector, D. L. (1992) Dynamic organization of DNA replication in mammalian cell nuclei: spatially and temporally defined replication of chromosome-specific alpha-satellite DNA sequences. Journal of Cell Biology, 116 (5). pp. 1095-1110. ISSN 0021-9525

Ola, A., Waga, S., Ellison, V., Stillman, B., McGurk, M., Leigh, I. M., Waseem, N. H., Waseem, A. (March 2001) Human-Saccharomyces cerevisiae proliferating cell nuclear antigen hybrids - Oligomeric structure and functional characterization using in vitro DNA replication. Journal of Biological Chemistry, 276 (13). pp. 10168-10177. ISSN 0021-9258

On, Kin Fan, Jaremko, Matt, Stillman, Bruce, Joshua-Tor, Leemor (December 2018) A structural view of the initiators for chromosome replication. Current Opinion in Structural Biology, 53. pp. 131-139. ISSN 0959-440X

Ozaki, S., Kawakami, H., Nakamura, K., Fujikawa, N., Kagawa, W., Yokoyama, S., Kurumizaka, H., Katayama, T. (December 2007) Analysis on a novel functional structure in DnaA for regulating the duplex unwinding of chromosomal replication origin. Genes & Genetic Systems, 82 (6). p. 545. ISSN 1341-7568

P

Paxton, W. A., Kang, S., Liu, R., Landau, N. R., Gingeras, T. R., Wu, L., Mackay, C. R., Koup, R. A. (1999) HIV-1 infectability of CD4+ lymphocytes with relation to β-chemokines and the CCR5 coreceptor. Immunology Letters, 66 (1-3). pp. 71-75. ISSN 01652478 (ISSN)

Pegoraro, G., Marcello, A., Myers, M. P., Giacca, M. (July 2006) Regulation of adeno-associated virus DNA replication by the cellular TAF-I/set complex. Journal of Virology, 80 (14). pp. 6855-6864. ISSN 0022538X

Persson, H., Pettersson, U., Mathews, M. B. (October 1978) Synthesis of a structural adenovirus polypeptide in the absence of viral DNA replication. Virology, 90 (1). pp. 67-79. ISSN 0042-6822 (Print)0042-6822 (Linking)

Pichugina, T., Sugawara, T., Kaykov, A., Schierding, W., Masuda, K., Uewaki, J., Grand, R. S., Allison, J. R., Martienssen, R. A., Nurse, P., Ueno, M., O'Sullivan, J. M. (January 2016) A diffusion model for the coordination of DNA replication in Schizosaccharomyces pombe. Sci Rep, 6. p. 18757. ISSN 2045-2322 (Electronic)2045-2322 (Linking)

Piirsoo, M., Ustav, E., Mandel, T., Stenlund, A., Ustav, M. (January 1996) Cis and trans requirements for stable episomal maintenance of the BPV-1 replicator. EMBO J, 15 (1). pp. 1-11. ISSN 0261-4189 (Print)0261-4189 (Linking)

Prasanth, S. G., Mendez, J., Prasanth, K. V. , Stillman, B. (January 2004) Dynamics of pre-replication complex proteins during the cell division cycle. Philos Trans R Soc Lond B Biol Sci, 359 (1441). pp. 7-16. ISSN 0962-8436 (Print)

Prasanth, S. G., Prasanth, K. V. , Stillman, B. (November 2002) ORC, a replication initiator protein required for multiple aspects of cell division cycle. Molecular Biology of the Cell, 13. 282A-282A. ISSN 1059-1524

Prasanth, S. G., Prasanth, K. V. , Stillman, B. (August 2002) Orc6 involved in DNA replication, chromosome segregation, and cytokinesis. Science, 297 (5583). pp. 1026-31. ISSN 1095-9203 (Electronic)

Prasanth, S. G., Shen, Z., Prasanth, K. V. , Stillman, B. (August 2010) Human origin recognition complex is essential for HP1 binding to chromatin and heterochromatin organization. Proceedings of the National Academy of Sciences of the United States of America, 107 (34). pp. 15093-8. ISSN 0027-8424

Prelich, G., Kostura, M., Marshak, D. R., Mathews, M. B., Stillman, B. (April 1987) The cell-cycle regulated proliferating cell nuclear antigen is required for SV40 DNA replication in vitro. Nature, 326 (6112). pp. 471-475. ISSN 0028-0836 (Print)

Prelich, G., Stillman, B. (April 1988) Coordinated leading and lagging strand synthesis during SV40 DNA replication in vitro requires PCNA. Cell, 53 (1). pp. 117-26. ISSN 0092-8674

Prelich, G., Stillman, B. W. (March 1986) Functional-Characterization of Thermolabile DNA-Binding Proteins That Affect Adenovirus DNA-Replication. Journal of Virology, 57 (3). pp. 883-892. ISSN 0022-538X

Q

Quelle, D. E., Ashmun, R. A., Shurtleff, S. A., Kato, J. Y., Barsagi, D., Roussel, M. F., Sherr, C. J. (August 1993) Overexpression of Mouse D-Type Cyclins Accelerates G(1) Phase in Rodent Fibroblasts. Genes Dev, 7 (8). pp. 1559-1571. ISSN 0890-9369

R

Rao, H., Marahrens, Y., Stillman, B. (November 1994) Functional conservation of multiple elements in yeast chromosomal replicators. Molecular and Cellular Biology, 14 (11). pp. 7643-51. ISSN 0270-7306

Rao, H., Stillman, B. (March 1995) The origin recognition complex interacts with a bipartite DNA binding site within yeast replicators. Proceedings of the National Academy of Sciences of the United States of America, 92 (6). pp. 2224-8. ISSN 0027-8424

Reed, S. H., Akiyama, M., Stillman, B., Friedberg, E. C. (December 1999) Yeast autonomously replicating sequence binding factor is involved in nucleotide excision repair. Genes and Development, 13 (23). pp. 3052-3058. ISSN 08909369 (ISSN)

Ren, J., Castel, S. E., Martienssen, R. A. (July 2015) Dicer in action at replication-transcription collisions. Mol Cell Oncol, 2 (3). e991224. ISSN 2372-3556 (Electronic)2372-3556 (Linking)

Revyakin, A., Liu, C., Ebright, R. H., Strick, T. R. (November 2006) Abortive initiation and productive initiation by RNA polymerase involve DNA scrunching. Science, 314 (5802). pp. 1139-1143. ISSN 00368075

S

Sanders, C. M., Stenlund, A. (June 2001) Mechanism and requirements for bovine papillomavirus, type 1, E1 initiator complex assembly promoted by the E2 transcription factor bound to distal sites. Journal of Biological Chemistry, 276 (26). pp. 23689-23699. ISSN 0021-9258

Sanders, C. M., Stenlund, A. (December 1998) Recruitment and loading of the E1 initiator protein: an ATP-dependent process catalysed by a transcription factor. Embo J, 17 (23). pp. 7044-55. ISSN 0261-4189 (Print)

Sanders, C. M., Stenlund, A. (February 2000) Transcription factor-dependent loading of the E1 initiator reveals modular assembly of the papillomavirus origin melting complex. Journal of Biological Chemistry, 275 (5). pp. 3522-3534. ISSN 0021-9258

Schneider, B. L., Yang, Q. H., Futcher, A. B. (April 1996) Linkage of replication to start by the Cdk inhibitor Sic1. Science, 272 (5261). pp. 560-2. ISSN 0036-8075 (Print)

Schorn, A. J., Martienssen, R. (May 2019) Getting in LINE with Replication. Molecular Cell, 74 (3). pp. 415-417. ISSN 10972765 (ISSN)

Schuck, S., Stenlund, A. (April 2007) ATP-dependent minor groove recognition of TA base pairs is required for template melting by the E1 initiator protein. J Virol, 81 (7). pp. 3293-3302. ISSN 0022-538X (Print)

Schuck, S., Stenlund, A. (November 2005) Assembly of a double hexameric helicase. Mol Cell, 20 (3). pp. 377-89. ISSN 1097-2765 (Print)

Schuck, S., Stenlund, A. (September 2011) Mechanistic analysis of local ori melting and helicase assembly by the papillomavirus e1 protein. Mol Cell, 43 (5). pp. 776-787. ISSN 1097-4164 (Electronic) 1097-2765 (Linking)

Schuck, S., Stenlund, A. (July 2005) Role of papillomavirus E1 initiator dimerization in DNA replication. J Virol, 79 (13). pp. 8661-4. ISSN 0022-538X (Print)

Schuck, S., Stenlund, A. (August 2006) Surface mutagenesis of the bovine papillomavirus E1 DNA binding domain reveals residues required for multiple functions related to DNA replication. J Virol, 80 (15). pp. 7491-9. ISSN 0022-538X (Print)

Sedman, J., Stenlund, A. (December 1995) Co-operative interaction between the initiator E1 and the transcriptional activator E2 is required for replicator specific DNA replication of bovine papillomavirus in vivo and in vitro. Embo J, 14 (24). pp. 6218-28. ISSN 0261-4189 (Print)

Sedman, J., Stenlund, A. (September 1996) The initiator protein E1 binds to the bovine papillomavirus origin of replication as a trimeric ring-like structure. Embo J, 15 (18). pp. 5085-92. ISSN 0261-4189 (Print)

Sedman, J., Ustav, M., Stenlund, A. (February 1994) DNA-Replication of Papillomaviruses. Journal of Cellular Biochemistry. p. 211. ISSN 0730-2312

Sedman, T., Sedman, J., Stenlund, A. (April 1997) Binding of the E1 and E2 proteins to the origin of replication of bovine papillomavirus. J Virol, 71 (4). pp. 2887-96. ISSN 0022-538X (Print)

Sheltzer, J. M., Blank, H. M., Pfau, S. J., Tange, Y., George, B. M., Humpton, T. J., Brito, I. L., Hiraoka, Y., Niwa, O., Amon, A. (August 2011) Aneuploidy drives genomic instability in yeast. Science, 333 (6045). pp. 1026-30. ISSN 1095-9203 (Electronic)0036-8075 (Linking)

Sheu, Y. J., Kinney, J. B., Stillman, B. (March 2016) Concerted activities of Mcm4, Sld3 and Dbf4 in control of origin activation and DNA replication fork progression. Genome Res, 26 (3). pp. 315-330. ISSN 1549-5469 (Electronic)1088-9051 (Linking) (Public Dataset)

Sheu, Y. J., Kinney, J. B., Lengronne, A., Pasero, P., Stillman, B. (April 2014) Domain within the helicase subunit Mcm4 integrates multiple kinase signals to control DNA replication initiation and fork progression. Proceedings of the National Academy of Sciences of the United States of America, 111 (18). E1899-1908. ISSN 0027-8424

Sheu, Y. J., Stillman, B. (October 2006) Cdc7-Dbf4 phosphorylates MCM proteins via a docking site-mediated mechanism to promote S phase progression. Mol Cell, 24 (1). pp. 101-13. ISSN 1097-2765 (Print)

Sheu, Y. J., Stillman, B. (January 2010) The Dbf4-Cdc7 kinase promotes S phase by alleviating an inhibitory activity in Mcm4. Nature, 463 (7277). pp. 113-117.

Sheu, Yi-Jun, Kawaguchi, Risa Karakida, Gillis, Jesse, Stillman, Bruce (December 2022) Prevalent and dynamic binding of the cell cycle checkpoint kinase Rad53 to gene promoters. eLife, 11. e84320. ISSN 2050-084X (Public Dataset)

Shibahara, K., Stillman, B. (February 1999) Replication-dependent marking of DNA by PCNA facilitates CAF-1-coupled inheritance of chromatin. Cell, 96 (4). pp. 575-85. ISSN 0092-8674 (Print)

Shibahara, K., Verreault, A., Stillman, B. (July 2000) The N-terminal domains of histones H3 and H4 are not necessary for chromatin assembly factor-1-mediated nucleosome assembly onto replicated DNA in vitro. Proceedings of the National Academy of Sciences of the United States of America, 97 (14). pp. 7766-7771. ISSN 0027-8424

Small, M. B., Gluzman, Y., Ozer, H. L. (1982) Enhanced Transformation of Human-Fibroblasts by Origin-Defective Simian Virus-40. Nature, 296 (5858). pp. 671-672.

Smith, Mervyn G. (1966) A replicating form of lambda phage DNA. In: IX International Congress for Microbiology; Symposia, Moscow.

Smith, S., Stillman, B. (June 1991) Immunological characterization of chromatin assembly factor I, a human cell factor required for chromatin assembly during DNA replication in vitro. Journal of Biological Chemistry, 266 (18). pp. 12041-12047. ISSN 0021-9258

Smith, S., Stillman, B. (1989) Purification and Characterization of a Replication-Dependent Chromatin Assembly Factor Isolated from Human Cells. Journal of Cellular Biochemistry - Supplement.(13 PART D). p. 173.

Smith, S., Stillman, B. (July 1989) Purification and characterization of CAF-I, a human cell factor required for chromatin assembly during DNA replication in vitro. Cell, 58 (1). pp. 15-25. ISSN 0092-8674

Smith, S., Stillman, B. (April 1991) Stepwise assembly of chromatin during DNA replication in vitro. Embo J, 10 (4). pp. 971-80. ISSN 0261-4189

Speck, C., Chen, Z., Li, H., Stillman, B. (November 2005) ATPase-dependent cooperative binding of ORC and Cdc6 to origin DNA. Nat Struct Mol Biol, 12 (11). pp. 965-71. ISSN 1545-9993 (Print)

Speck, C., Stillman, B. (April 2007) Cdc6 ATPase activity regulates ORC center dot Cdc6 stability and the selection of specific DNA sequences as origins of DNA replication. Journal of Biological Chemistry, 282 (16). pp. 11705-11714. ISSN 0021-9258

Speck, C., Stillman, B. (July 2007) Initiation of DNA replication - Assembly of a molecular machine depends on origin DNA. Febs Journal, 274 (S1). p. 72. ISSN 1742-464X

Spector, D. L., Vasconcelos, A. C., Triemer, R. E. (1981) DNA duplication and chromosome structure in the dinoflagellates. Protoplasm, 105 (3-4). pp. 185-194. ISSN 0033-183X

Springer, P. S., McCombie, W. R., Sundaresan, V., Martienssen, R. A. (May 1995) Gene trap tagging of PROLIFERA, an essential MCM2-3-5-like gene in Arabidopsis. Science, 268 (5212). pp. 877-880. ISSN 0036-8075

Stein, R. W., Corrigan, M., Yaciuk, P., Whelan, J., Moran, E. (September 1990) Analysis of E1A-mediated growth regulation functions: binding of the 300-kilodalton cellular product correlates with E1A enhancer repression function and DNA synthesis-inducing activity. J Virol, 64 (9). pp. 4421-7. ISSN 0022-538X (Print)0022-538X (Linking)

Stenlund, A. (February 2003) E1 initiator DNA binding specificity is unmasked by selective inhibition of non-specific DNA binding. Embo Journal, 22 (4). pp. 954-963. ISSN 0261-4189

Stenlund, A. (October 2003) Initiation of DNA replication: Lessons from viral initiator proteins. Nature Reviews Molecular Cell Biology, 4 (10). pp. 777-785. ISSN 1471-0072

Stenlund, A., Ustav, M. (1991) Cis and Trans Requirements for Bpv DNA Replication. Journal of Cellular Biochemistry - Supplement, 15 (PART E). p. 76.

Stillman, Bruce (June 2024) Establishing a biochemical understanding of the initiation of chromosome replication in bacteria. Proceedings of the National Academy of Sciences of the United States of America, 121 (23). e2400667121. ISSN 0027-8424

Stillman, Bruce, Ouyang, Meng, Zali, Narges, Hane, Kimberly, Hossain, Manzar (March 2024) Biochemical Investigation and Evolutionary Comparison of the Mechanism of the Initiation of DNA Replication in Eukaryotic Cells. In: UNSPECIFIED.

Stillman, B., Speck, C., Li, H. L. (April 2014) Biochemical studies on replication of the genome in eukaryotes. Faseb Journal, 28 (1). ISSN 0892-6638

Stillman, B. (December 1996) Cell cycle control of DNA replication. Science, 274 (5293). pp. 1659-64. ISSN 0036-8075 (Print)

Stillman, B. (May 1986) Chromatin assembly during SV40 DNA replication in vitro. Cell, 45 (4). pp. 555-65. ISSN 0092-8674 (Print)

Stillman, B. (1996) Comparison of DNA replication in cells from prokarya and eukarya. In: DNA replication in eukaryotic cells. Cold Spring Harbor monograph series, 31 . Cold Spring Harbor Laboratory Press, Plainview, NY, pp. 435-460. ISBN 0879694599

Stillman, B. (December 2001) DNA replication - Genomic views of genome duplication. Science, 294 (5550). pp. 2301-2304. ISSN 0036-8075

Stillman, B. (1993) DNA replication: Replicator renaissance. Nature, 366 (6455). pp. 506-507. ISSN 00280836 (ISSN)

Stillman, B. (August 2013) Deoxynucleoside triphosphate (dNTP) synthesis and destruction regulate the replication of both cell and virus genomes. Proceedings of the National Academy of Sciences of the United States of America, 110 (35). pp. 14120-14121. ISSN 0027-8424

Stillman, B. (2009) Initiation of DNA replication. In: The Cell Division Cycle: Controlling when and where cells divide and differentiate, The Biomedical & Life Sciences Collection. Henry Stewart Talks Ltd, London.

Stillman, B. (April 1994) Initiation of Eukaryotic DNA-Replication. Faseb Journal, 8 (7). A1323-A1323. ISSN 0892-6638

Stillman, B. (March 1994) Initiation of chromosomal DNA replication in eukaryotes. Lessons from lambda. Journal of Biological Chemistry, 269 (10). pp. 7047-50. ISSN 0021-9258

Stillman, B. (1993) Initiation of chromosome replication in eukaryotic cells. The Harvey Lectures, 88. pp. 115-140. ISSN 0073-0874

Stillman, B. (August 1988) Initiation of eukaryotic DNA replication in vitro. Bioessays, 9 (2-3). pp. 56-60. ISSN 0265-9247 (Print)

Stillman, B. (1989) Initiation of eukaryotic DNA replication in vitro. Annual Review of Cell Biology, 5. pp. 197-245. ISSN 0743-4634 (Print)0743-4634

Stillman, B. (1991) Mechanism and regulation of eukaryotic DNA replication. In: Origins of human cancer : a comprehensive review. Cold Spring Harbor Laboratory Press, Plainview, NY, pp. 77-89. ISBN 0879694041

Stillman, B. (1992) Mechanisms and control of cellular DNA replication. In: DNA replication and the cell cycle. Colloquium der Gesellschaft für Biologische Chemie, 43 . Springer-Verlag, Berlin, pp. 127-143. ISBN 978-3-642-77042-5

Stillman, B. (February 2005) Origin recognition and the chromosome cycle. FEBS Letters, 579 (4). pp. 877-84. ISSN 00145793 (ISSN)

Stillman, B. (July 2015) Reconsidering DNA Polymerases at the Replication Fork in Eukaryotes. Molecular Cell, 59 (2). pp. 139-141. ISSN 1097-2765

Stillman, B. (September 1994) Smart machines at the DNA replication fork. Cell, 78 (5). pp. 725-8. ISSN 0092-8674 (Print)

Stillman, B. (November 2011) Talk from Bruce Stillman at the Cold Spring Harbor Laboratory In-House Symposium (2011). [Video] (Unpublished)

Stillman, B., Bell, S., Fien, K., Marahrens, Y., Melendy, T., Rao, H., Ruppert, J. M., Waga, S. (March 1993) Initiation of Virus and Cell-DNA Replication. Journal of Cellular Biochemistry, 53 (17D). p. 6. ISSN 0730-2312

Stillman, B., Bell, S. P., Dutta, A., Marahrens, Y. (1992) DNA replication and the cell cycle. Regulation of the eukaryotic cell cycle. Ciba Foundation symposium, 170. 147-156; discussion 156. ISSN 03005208 (ISSN)

Stillman, B., Dutta, A., Melendy, T., Tsurimoto, T. (1991) Mechanism and Regulation of DNA Replication Lessons from Sv-40. Journal of Cellular Biochemistry - Supplement, 47 (S15E). p. 46.

Stillman, B., Fairman, M. P., Din, S. U., Tsurimoto, T. (1989) DNA Replication in-Vitro from the Sv-40 Origin. Journal of Cellular Biochemistry - Supplement.(13 PART D), 41 (S13D). p. 73.

Stillman, B., Fairman, M. P., Prelich, G., Smith, S., Tsurimoto, T. (1988) Cellular Proteins Required for Multiple Stages of Sv40 DNA Replication in-Vitro. In: Cell Cycle Control in Eukaryotes. Current Communications in Molecular Biology (ED.). Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, pp. 84-89.

Stillman, B., Gerard, R. D., Guggenheimer, R. A., Gluzman, Y. (1985) T antigen and template requirements for SV40 DNA replication in vitro. EMBO Journal, 4 (11). pp. 2933-2939. ISSN 0261-4189

Stillman, B. W. (1981) Adenovirus DNA-Replication Invitro - a Protein Linked to the 5' End of Nascent DNA Strands. Journal of Virology, 37 (1). pp. 139-147. ISSN 0022-538X

Stillman, B. W. (1985) Biochemical and genetic analysis of adenovirus DNA replication in vitro. In: Genetic engineering : principles and methods. Plenum Publishing, New York, pp. 1-27. ISBN 030642004X

Stillman, B. W. (November 1983) The replication of adenovirus DNA with purified proteins. Cell, 35 (1). pp. 7-9. ISSN 0092-8674 (Print)

Stillman, B. W. (1983) The replication of adenovirus DNA. In: UCLA symposia on molecular and cellular biology, April 3rd-9th 1983, Keystone, CO.

Stillman, B. W., Bellett, A. J., Robinson, A. J. (October 1977) Replication of linear adenovirus DNA is not hairpin-primed. Nature, 269 (5630). pp. 723-5. ISSN 0028-0836 (Print)

Stillman, B. W., Bellett, A. J. D. (1979) Replication of DNA in adenovirus-infected cells. Cold Spring Harbor Symposia on Quantitative Biology, 43 (2). pp. 729-739. ISSN 00917451 (ISSN)

Stillman, B. W., Bellett, A. J. D. (February 1979) An adenovirus protein associated with the ends of replicating DNA molecules. Virology, 93 (1). pp. 69-79.

Stillman, B. W., Diffley, J. F. X., Prelich, G., Guggenheimer, R. A. (1986) DNA-Protein Interactions at the Replication Origins of Adenovirus and Sv-40. In: DNA Tumor Viruses: Control of gene expression and replication. Cancer Cells, 4 . Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, pp. 453-464. ISBN 0879691921

Stillman, B. W., Gluzman, Y. (1985) Replication and Supercoiling of Sv-40 DNA in Cell Extracts from Human Cells. Molecular & Cellular Biology, 5 (8). pp. 2051-2060.

Stillman, B. W., Tamanoi, F. (1983) Adenoviral DNA replication: DNA sequences and enzymes required for initiation in vitro. Cold Spring Harbor Symposia on Quantitative Biology, 47 (2). pp. 741-750. ISSN 00917451 (ISSN)

Stillman, B. W., Tamanoi, F. (1983) The Interaction of Proteins and DNA Sequences Required for Adenovirus DNA Replication in-Vitro. Journal of Cellular Biochemistry, 21 (S7A). p. 130.

Stillman, B. W., Tamanoi, F., Mathews, M. B. (December 1982) Purification of an adenovirus-coded DNA polymerase that is required for initiation of DNA replication. Cell, 31 (3 Pt 2). pp. 613-23. ISSN 0092-8674 (Print)

Stillman, B. W., Topp, W. C., Engler, J. A. (November 1982) Conserved sequences at the origin of adenovirus DNA replication. Journal of Virology, 44 (2). pp. 530-7. ISSN 0022-538X

Stillman, B. W., White, E., Grodzicker, T. (1984) Independent Mutations in Adenovirus Type 2 Ts-111 Cause Degradation of Cellular DNA and Defective Viral DNA Replication. Journal of Virology, 50 (2). pp. 598-605.

Stillman, Bruce (February 2022) The remarkable gymnastics of ORC. eLife, 11. ISSN 2050-084X

Sun, J., Yuan, Z., Stillman, B., Speck, C., Li, H. (2016) Structure and function studies of replication initiation factors. In: The Initiation of DNA Replication in Eukaryotes. Springer, pp. 427-441. ISBN 978-331924696-3978-331924694-9

Sun, J., Fernandez-Cid, A., Riera, A., Tognetti, S., Yuan, Z., Stillman, B., Speck, C., Li, H. (October 2014) Structural and mechanistic insights into Mcm2-7 double-hexamer assembly and function. Genes & Development, 28 (20). pp. 2291-303. ISSN 0890-9369

Szyjka, S. J., Aparicio, J. G., Viggiani, C. J., Knott, S., Xu, W., Tavare, S., Aparicio, O. M. (July 2008) Rad53 regulates replication fork restart after DNA damage in Saccharomyces cerevisiae. Genes Dev, 22 (14). pp. 1906-20. ISSN 0890-9369 (Print)0890-9369

Szymanski, P., Stenlund, A. (November 1991) Regulation of early gene expression from the bovine papillomavirus genome in transiently transfected C127 cells. J Virol, 65 (11). pp. 5710-20. ISSN 0022-538x

T

Tamanoi, F., Stillman, B. W. (April 1982) Function of Adenovirus Terminal Protein in the Initiation of DNA Replication. Proceedings of the National Academy of Sciences of the United States of America, 79 (7). pp. 2221-2225. ISSN 0027-8424

Tamanoi, F., Stillman, B. W. (November 1983) Initiation of adenovirus DNA replication in vitro requires a specific DNA sequence. Proceedings of the National Academy of Sciences of the United States of America, 80 (21). pp. 6446-50. ISSN 0027-8424

Tamanoi, F., Stillman, B. W. (1983) The Origin of Adenovirus DNA-Replication. In: The Molecular biology of adenoviruses : 30 years of adenovirus research, 1953-1983. Current Topics in Microbiology and Immunology, 109 . Springer-Verlag, Berlin; New York, pp. 75-87. ISBN 0387130349

Tjian, R. (1979) Protein-DNA Interactions at the Origin of Simian Virus 40 DNA Replication. Cold Spring Harb Symp Quant Biol, 43. pp. 655-662. ISSN 0091-7451

Tjian, R. (1979) Protein-DNA interactions at the origin of simian virus 40 DNA replication. Cold Spring Harbor Symposia on Quantitative Biology, 43 (2). pp. 655-61.

Tjian, R., Robbins, A. (February 1979) Enzymatic activities associated with a purified simian virus 40 T antigen-related protein. Proc Natl Acad Sci U S A, 76 (2). pp. 610-4. ISSN 0027-8424 (Print)0027-8424 (Linking)

Tsaniras, S. C., Delinasios, G. J., Petropoulos, M., Panagopoulos, A., Anagnostopoulos, A. K., Villiou, M., Vlachakis, D., Bravou, V., Stathopoulos, G. T., Taraviras, S. (November 2019) DNA Replication Inhibitor Geminin and Retinoic Acid Signaling Participate in Complex Interactions Associated With Pluripotency. Cancer Genomics Proteomics, 16 (6). pp. 593-601. ISSN 1109-6535

Tsurimoto, T., Fairman, M. P., Stillman, B. (September 1989) Simian virus 40 DNA replication in vitro: identification of multiple stages of initiation. Molecular & Cellular Biology, 9 (9). pp. 3839-49. ISSN 0270-7306

Tsurimoto, T., Melendy, T., Stillman, B. (August 1990) Sequential initiation of lagging and leading strand synthesis by two different polymerase complexes at the SV40 DNA replication origin. Nature, 346 (6284). pp. 534-9. ISSN 0028-0836

Tsurimoto, T., Stillman, B. (February 1990) Functions of replication factor C and proliferating-cell nuclear antigen: functional similarity of DNA polymerase accessory proteins from human cells and bacteriophage T4. Proceedings of the National Academy of Sciences of the United States of America, 87 (3). pp. 1023-7. ISSN 0027-8424

Tsurimoto, T., Stillman, B. (February 1989) Purification of a cellular replication factor, RF-C, that is required for coordinated synthesis of leading and lagging strands during simian virus 40 DNA replication in vitro. Molecular & Cellular Biology, 9 (2). pp. 609-19. ISSN 0270-7306

Tsurimoto, T., Stillman, B. (January 1991) Replication factors required for SV40 DNA replication in vitro. I. DNA structure-specific recognition of a primer-template junction by eukaryotic DNA polymerases and their accessory proteins. J Biol Chem, 266 (3). pp. 1950-60. ISSN 0021-9258

Tsurimoto, T., Stillman, B. (January 1991) Replication factors required for SV40 DNA replication in vitro. II. Switching of DNA polymerase alpha and delta during initiation of leading and lagging strand synthesis. Journal of Biological Chemistry, 266 (3). pp. 1961-8. ISSN 0021-9258

Tugal, T., Zou-Yang, X. H., Gavin, K., Pappin, D., Canas, B., Kobayashi, R., Hunt, T., Stillman, B. (December 1998) The Orc4p and Orc5p Subunits of the Xenopus and Human Origin Recognition Complex Are Related to Orc1p and Cdc6p. Journal of Biological Chemistry, 273 (49). pp. 32421-32429. ISSN 0021-9258

U

Ustav, E., Ustav, M., Szymanski, P., Stenlund, A. (February 1993) The bovine papillomavirus origin of replication requires a binding site for the E2 transcriptional activator. Proc Natl Acad Sci U S A, 90 (3). pp. 898-902. ISSN 0027-8424 (Print)

Ustav, M., Stenlund, A. (February 1991) Transient Replication of Bpv-1 Requires 2 Viral Polypeptides Encoded by the E1 and E2 Open Reading Frames. Embo Journal, 10 (2). pp. 449-457. ISSN 0261-4189

Ustav, M., Ustav, E., Szymanski, P., Stenlund, A. (December 1991) Identification of the origin of replication of bovine papillomavirus and characterization of the viral origin recognition factor E1. Embo J, 10 (13). pp. 4321-9.

V

Van Dyck, E., Foury, F., Stillman, B., Brill, S. J. (September 1992) A Single-Stranded-DNA Binding-Protein Required for Mitochondrial-DNA Replication in Saccharomyces-Cerevisiae Is Homologous to Escherichia-Coli Ssb. Embo Journal, 11 (9). pp. 3421-3430. ISSN 0261-4189

Van Scoy, S., Watakabe, I., Krainer, A. R., Hearing, J. (September 2000) Human p32: A coactivator for Epstein-Barr virus nuclear antigen-1-mediated transcriptional activation and possible role in viral latent cycle DNA replication. Virology, 275 (1). pp. 145-157. ISSN 0042-6822

W

Waga, S. (September 1995) [Eukaryotic DNA replication: analysis of reconstitution of SV40 DNA replication]. Seikagaku, 67 (9). pp. 1142-8. ISSN 0037-1017 (Print)

Waga, S., Bauer, G., Stillman, B. (April 1994) Reconstitution of complete SV40 DNA replication with purified replication factors. Journal of Biological Chemistry, 269 (14). pp. 10923-34. ISSN 0021-9258

Waga, S., Hannon, G. J., Beach, D., Stillman, B. (1994) The p21 inhibitor of cyclin-dependent kinases controls DNA replication by interaction with PCNA. Nature, 369 (6481). pp. 574-578. ISSN 00280836 (ISSN)

Waga, S., Li, R., Stillman, B. (April 1997) p53-induced p21 controls DNA replication. Leukemia, 11 Sup. pp. 321-3. ISSN 0887-6924 (Print)

Waga, S., Stillman, B. (May 1994) Anatomy of a DNA replication fork revealed by reconstitution of SV40 DNA replication in vitro. Nature, 369 (6477). pp. 207-12. ISSN 0028-0836 (Print)

Waga, S., Stillman, B. (July 1998) Cyclin-dependent kinase inhibitor p21 modulates the DNA primer-template recognition complex. Molecular and Cellular Biology, 18 (7). pp. 4177-87. ISSN 0270-7306

Waga, S., Stillman, B. (1998) The DNA replication fork in eukaryotic cells. Annual Review of Biochemistry, 67. pp. 721-51. ISSN 0066-4154

Wang, H. G., Draetta, G., Moran, E. (August 1991) E1A induces phosphorylation of the retinoblastoma protein independently of direct physical association between the E1A and retinoblastoma products. Mol Cell Biol, 11 (8). pp. 4253-65. ISSN 0270-7306 (Print)0270-7306 (Linking)

Wear, E. E., Song, J., Zynda, G., LeBlanc, C., Lee, T. J., Mickelson-Young, L., Concia, L., Mulvaney, P., Szymanski, E. S., Allen, G. C., Martienssen, R., Vaughn, M. W., Hanley-Bowdoin, L., Thompson, W. (September 2017) Genomic analysis of the DNA replication timing program during mitotic S phase in maize (Zea mays L.) root tips. Plant Cell, 29 (9). pp. 2126-49. ISSN 1040-4651

Wear, Emily E, Song, Jawon, Zynda, Gregory J, Mickelson-Young, Leigh, LeBlanc, Chantal, Lee, Tae-Jin, Deppong, David O, Allen, George C, Martienssen, Robert A, Vaughn, Matthew W, Hanley-Bowdoin, Linda, Thompson, William F (October 2020) Comparing DNA replication programs reveals large timing shifts at centromeres of endocycling cells in maize roots. PLoS Genetics, 16 (10). e1008623. ISSN 1553-7404

Weinreich, M., Liang, C., Chen, H. H., Stillman, B. (September 2001) Binding of cyclin-dependent kinases to ORC and Cdc6p regulates the chromosome replication cycle. Proceedings of the National Academy of Sciences of the United States of America, 98 (20). pp. 11211-11217. ISSN 0027-8424

Weinreich, M., Liang, C., Stillman, B. (January 1999) The Cdc6p nucleotide-binding motif is required for loading mcm proteins onto chromatin. Proceedings of the National Academy of Sciences of the United States of America, 96 (2). pp. 441-6. ISSN 0027-8424

Wheeler, E., Brooks, A.M., Concia, L., Vera, D., Wear, E. E., LeBlanc, C., Ramu, U., Vaughn, M. W., Bass, H., Martienssen, R. A., Thompson, W.F., Hanley-Bowdoin, L. (March 2020) Arabidopsis DNA Replication Initiates in Intergenic, AT-rich Open Chromatin. Plant Physiology. ISSN 0032-0889 (Public Dataset)

Wigler, M. H., Levy, D., Perucho, M. (1981) The somatic replication of DNA methylation. Cell, 24 (1). pp. 33-40.

Williams, R. S., Shohet, R. V., Stillman, B. (January 1997) A human protein related to yeast Cdc6p. Proceedings of the National Academy of Sciences of the United States of America, 94 (1). pp. 142-7. ISSN 0027-8424

X

Xiong, Y., Zhang, H., Beach, D. (October 1992) D type cyclins associate with multiple protein kinases and the DNA replication and repair factor PCNA. Cell, 71 (3). pp. 505-14. ISSN 0092-8674 (Print)0092-8674 (Linking)

Y

Yan, Z., DeGregori, J., Shohet, R., Leone, G., Stillman, B., Nevins, J. R., Williams, R. S. (March 1998) Cdc6 is regulated by E2F and is essential for DNA replication in mammalian cells. Proceedings of the National Academy of Sciences of the United States of America, 95 (7). pp. 3603-3608. ISSN 0027-8424

Yuan, Z., Riera, A., Bai, L., Sun, J., Nandi, S., Spanos, C., Chen, Z. A., Barbon, M., Rappsilber, J., Stillman, B., Speck, C., Li, H. (March 2017) Structural basis of Mcm2-7 replicative helicase loading by ORC-Cdc6 and Cdt1. Nat Struct Mol Biol, 24 (3). pp. 316-324. ISSN 1545-9985 (Public Dataset)

Yuan, Zuanning, Schneider, Sarah, Dodd, Thomas, Riera, A., Bai, Lin, Yan, Chunli, Magdalou, Indiana, Ivanov, Ivaylo, Stillman, Bruce, Li, Huilin, Speck, C. (July 2020) Structural mechanism of helicase loading onto replication origin DNA by ORC-Cdc6. Proceedings of the National Academy of Sciences of the United States of America, 117 (30). pp. 17747-17756. ISSN 0027-8424

Z

Zaratiegui, B. M., Vaughn, M. W., Irvine, D. V., Goto, D. , Watt, S., Bahler, J., Arcangioli, B., Martienssen, R. A. (January 2011) CENP-B preserves genome integrity at replication forks paused by retrotransposon LTR. Nature, 469 (7328). pp. 112-5. ISSN 1476-4687 (Electronic)0028-0836 (Linking)

Zhang, Z. G., Shibahara, K., Stillman, B. (November 2000) PCNA connects DNA replication to epigenetic inheritance in yeast. Nature, 408 (6809). pp. 221-225. ISSN 0028-0836

Zhong, Y., Nellimoottil, T., Peace, J. M., Knott, S. R., Villwock, S. K., Yee, J. M., Jancuska, J. M., Rege, S., Tecklenburg, M., Sclafani, R. A., Tavare, S., Aparicio, O. M. (April 2013) The level of origin firing inversely affects the rate of replication fork progression. J Cell Biol, 201 (3). pp. 373-83. ISSN 0021-9525

Zhu, H., Cong, J. P., Mamtora, G., Gingeras, T. R., Shenk, T. (1998) Cellular gene expression altered by human cytomegalovirus: Global monitoring with oligonucleotide arrays. Proceedings of the National Academy of Sciences of the United States of America, 95 (24). pp. 14470-14475. ISSN 00278424 (ISSN) (Public Dataset)

Zou, L., Stillman, B. (May 2000) Assembly of a complex containing Cdc45p, replication protein A, and Mcm2p at replication origins controlled by S-phase cyclin-dependent kinases and Cdc7p-Dbf4p kinase. Molecular and Cellular Biology, 20 (9). pp. 3086-3096. ISSN 0270-7306

Zou, L., Stillman, B. (April 1998) Formation of a preinitiation complex by S-phase cyclin CDK-dependent loading of Cdc45p onto chromatin. Science, 280 (5363). pp. 593-6. ISSN 0036-8075 (Print)