Items where Year is 2017

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Number of items: 288.

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Abeshouse, A., Adebamowo, C., Adebamowo, S. N., Akbani, R., Akeredolu, T., Ally, A., Anderson, M. L., Anur, P., Appelbaum, E. L., Armenia, J., Auman, J. T., Bailey, M. H., Baker, L., Balasundaram, M., Balu, S., Barthel, F. P., Bartlett, J., Baylin, S. B., Behera, M., Belyaev, D., Bennett, J., Benz, C., Beroukhim, R., Birrer, M., Bocklage, T., Bodenheimer, T., Boice, L., Bootwalla, M. S., Bowen, J., Bowlby, R., Boyd, J., Brohl, A. S., Brooks, D., Byers, L., Carlsen, R., Castro, P., Chen, H. W., Cherniack, A. D., Chibon, F., Chin, L., Cho, J., Chuah, E., Chudamani, S., Cibulskis, C., Cooper, L. A. D., Cope, L., Cordes, M. G., Crain, D., Curley, E., Danilova, L., Dao, F., Davis, I. J., Davis, L. E., Defreitas, T., Delman, K., Demchok, J. A., Demetri, G. D., Demicco, E. G., Dhalla, N., Diao, L., Ding, L., DiSaia, P., Dottino, P., Doyle, L. A., Drill, E., Dubina, M., Eschbacher, J., Fedosenko, K., Felau, I., Ferguson, M. L., Frazer, S., Fronick, C. C., Fulidou, V., Fulton, L. A., Fulton, R. S., Gabriel, S. B., Gao, J., Gao, Q., Gardner, J., Gastier-Foster, J. M., Gay, C. M., Gehlenborg, N., Gerken, M., Getz, G., Godwin, A. K., Godwin, E. M., Gordienko, E., Grilley-Olson, J. E., Gutman, D. A., Gutmann, D. H., Hayes, D. N., Hegde, A. M., Heiman, D. I., Heins, Z., Helsel, C., Hepperla, A. J., Higgins, K., Hoadley, K. A., Hobensack, S., Holt, R. A., Hoon, D. B., Hornick, J. L., Hoyle, A. P., Hu, X., Huang, M., Hutter, C. M., Iacocca, M., Ingram, D. R., Ittmann, M., Iype, L., Jefferys, S. R., Jones, K. B., Jones, C. D., Jones, S. J. M., Kalir, T., Karlan, B. Y., Karseladze, A., Kasaian, K., Kim, J., Kundra, R., Kuo, H., Ladanyi, M., Lai, P. H., Laird, P. W., Larsson, E., Lawrence, M. S., Lazar, A. J., Lee, S., Lee, D., Lehmann, K. V., Leraas, K. M., Lester, J., Levine, D. A., Li, I., Lichtenberg, T. M., Lin, P., Liu, J., Liu, W., Liu, E. M., Lolla, L., Lu, Y., Ma, Y., Madan, R., Maglinte, D. T., Magliocco, A., Maki, R. G., Mallery, D., Manikhas, G., Mardis, E. R., Mariamidze, A., Marra, M. A., Martignetti, J. A., Martinez, C., Mayo, M., McLellan, M. D., Meier, S., Meng, S., Meyerson, M., Mieczkowski, P. A., Miller, C. A., Mills, G. B., Moore, R. A., Morris, S., Mose, L. E., Mozgovoy, E., Mungall, A. J., Mungall, K., Nalisnik, M., Naresh, R., Newton, Y., Noble, M. S., Novak, J. E., Ochoa, A., Olvera, N., Owonikoko, T. K., Paklina, O., Parfitt, J., Parker, J. S., Pastore, A., Paulauskis, J., Penny, R., Pereira, E., Perou, C. M., Perou, A. H., Pihl, T., Pollock, R. E., Potapova, O., Radenbaugh, A. J., Ramalingam, S. S., Ramirez, N. C., Rathmell, W. K., Raut, C. P., Riedel, R. F., Reilly, C., Reynolds, S. M., Roach, J., Robertson, A. G., Roszik, J., Rubin, B. P., Sadeghi, S., Saksena, G., Salner, A., Sanchez-Vega, F., Sander, C., Schein, J. E., Schmidt, H. K., Schultz, N., Schumacher, S. E., Sekhon, H., Senbabaoglu, Y., Setdikova, G., Shelton, C., Shelton, T., Shen, R., Shi, Y., Shih, J., Shmulevich, I., Sica, G. L., Simons, J. V., Singer, S., Sipahimalani, P., Skelly, T., Socci, N., Sofia, H. J., Soloway, M. G., Spellman, P., Sun, Q., Swanson, P., Tam, A., Tan, D., Tarnuzzer, R., Thiessen, N., Thompson, E., Thorne, L. B., Tong, P., Torres, K. E., van de Rijn, M., Van Den Berg, D. J., Van Tine, B. A., Veluvolu, U., Verhaak, R., Voet, D., Voronina, O., Wan, Y., Wang, Z., Wang, J., Weinstein, J. N., Weisenberger, D. J., Wilkerson, M. D., Wilson, R. K., Wise, L., Wong, T., Wong, W., Wrangle, J., Wu, Y., Wyczalkowski, M., Yang, L., Yau, C., Yellapantula, V., Zenklusen, J. C., Zhang, J. J., Zhang, H., Zhang, H., Zmuda, E., The Cancer Genome Atlas Research, Network (2017) Comprehensive and Integrated Genomic Characterization of Adult Soft Tissue Sarcomas. Cell, 171 (4). 950-965.e28. (Public Dataset)

Albrengues, J., Wysocki, R. W., Maiorino, L., Egeblad, M. (November 2017) Re-cyclin' Cell-Cycle Components to Make NETs. Dev Cell, 43 (4). pp. 379-380. ISSN 1534-5807

Amin, J. B., Salussolia, C. L., Chan, K., Regan, M. C., Dai, J., Zhou, H. X., Furukawa, H., Bowen, M. E., Wollmuth, L. P. (June 2017) Divergent roles of a peripheral transmembrane segment in AMPA and NMDA receptors. J Gen Physiol, 149 (6). pp. 661-680. ISSN 0022-1295

Ariazi, E. A., Taylor, J. C., Black, M. A., Nicolas, E., Slifker, M. J., Azzam, D. J., Boyd, J. (2017) A new role for ERα: Silencing via DNA methylation of basal, stem cell, and EMT genes. Molecular Cancer Research, 15 (2). pp. 152-164. ISSN 1541-7786

Balachandran, V. P., Luksza, M., Zhao, J. N., Makarov, V., Moral, J. A., Remark, R., Herbst, B., Askan, G., Bhanot, U., Senbabaoglu, Y., Wells, D. K., Cary, C. I. O., Grbovic-Huezo, O., Attiyeh, M., Medina, B., Zhang, J., Loo, J., Saglimbeni, J., Abu-Akeel, M., Zappasodi, R., Riaz, N., Smoragiewicz, M., Kelley, Z. L., Basturk, O., Gonen, M., Levine, A. J., Allen, P. J., Fearon, D. T., Merad, M., Gnjatic, S., Iacobuzio-Donahue, C. A., Wolchok, J. D., DeMatteo, R. P., Chan, T. A., Greenbaum, B. D., Merghoub, T., Leach, S. D. (November 2017) Identification of unique neoantigen qualities in long-term survivors of pancreatic cancer. Nature, 551 (7681). pp. 512-516. ISSN 0028-0836

Balasooriya, G., Goschorska, M., Piddini, E., Rawlins, E. L. (May 2017) FGFR2 is required for airway basal cell self-renewal and terminal differentiation. Development, 144 (9). pp. 1600-1606. ISSN 0950-1991

Balkunde, R., Kitagawa, M., Xu, X. M., Wang, J., Jackson, D. (April 2017) SHOOT MERISTEMLESS trafficking controls axillary meristem formation, meristem size and organ boundaries in Arabidopsis. Plant J, 90 (3). pp. 435-446. ISSN 0960-7412

Ballouz, S., Gillis, J. (October 2017) DISTINGUISHING BIOLOGICAL FROM TECHNOLOGICAL SIGNALS IN THE FUNCTIONAL INTERPRETATION OF NEUROPSYCHIATRIC DISEASE GENES. European Neuropsychopharmacology, 27 (Supple). Abstract 31; S223-S224. ISSN 0924-977X

Ballouz, S., Gillis, J. (July 2017) Strength of functional signature correlates with effect size in autism. Genome Med, 9 (1). p. 64. ISSN 1756-994x

Ballouz, S., Weber, M., Pavlidis, P., Gillis, J. (February 2017) EGAD: ultra-fast functional analysis of gene networks. Bioinformatics, 33 (4). pp. 612-614. ISSN 1367-4803

Banerjee, Arkarup, Long, Michael A (May 2017) Ready, Steady, Go! Imaging Cortical Activity during Movement Planning and Executio. Neuron, 94 (4). pp. 698-700. ISSN 0896-6273

Banerjee, Arkarup, Marbach, F., Anselmi, Francesca, Koh, Matthew S, Davis, Martin B, Garcia da Silva, P., Delevich, K., Oyibo, Hassana K., Gupta, Priyanka, Li, Bo, Albeanu, Dinu F (July 2017) Long-range interactions between short axon cells and external tufted cells gate glomerular output in the mouse olfactory bulb. Neuron, 87 (1). pp. 193-207. ISSN 0896-6273

Barbieri, I., Tzelepis, K., Pandolfini, L., Shi, J., Millan-Zambrano, G., Robson, S. C., Aspris, D., Migliori, V., Bannister, A. J., Han, N., De Braekeleer, E., Ponstingl, H., Hendrick, A., Vakoc, C. R., Vassiliou, G. S., Kouzarides, T. (December 2017) Promoter-bound METTL3 maintains myeloid leukaemia by m(6)A-dependent translation control. Nature, 552 (7683). pp. 126-131. ISSN 0028-0836

Barone, L., Williams, J., Micklos, D. (October 2017) Unmet needs for analyzing biological big data: A survey of 704 NSF principal investigators. PLoS Comput Biol, 13 (10). e1005755. ISSN 1553-734x

Barone, Lindsay, Williams, Jason, Micklos, David (February 2017) Unmet Needs for Analyzing Biological Big Data: A Survey of 704 NSF Principal Investigators. BioRxiv. (Unpublished)

Baslan, T., Hicks, J. (August 2017) Unravelling biology and shifting paradigms in cancer with single-cell sequencing. Nat Rev Cancer, 17 (9). pp. 557-569. ISSN 1474-175x

Batut, P. J., Gingeras, T. R. (December 2017) Conserved noncoding transcription and core promoter regulatory code in early Drosophila development. Elife, 6. ISSN 2050-084x

Berstein, Y., McCarthy, S., Kramer, M., Zandi, P., Goes, F., Potash, J., McCombie, R. (October 2017) RARE VARIANT DETECTION IN COMPLEX DISORDERS USING THE BIRTHDAY MODEL. European Neuropsychopharmacology, 27 (Supple). S367-S368, Meeting Abstract 2. ISSN 0924-977X

Beshel, J., Dubnau, J., Zhong, Y. (January 2017) A Leptin Analog Locally Produced in the Brain Acts via a Conserved Neural Circuit to Modulate Obesity-Linked Behaviors in Drosophila. Cell Metab, 25 (1). pp. 208-217. ISSN 1932-7420 (Electronic)1550-4131 (Linking)

Beyaz, S., Kim, J. H., Pinello, L., Xifaras, M. E., Hu, Y., Huang, J., Kerenyi, M. A., Das, P. P., Barnitz, R. A., Herault, A., Dogum, R., Haining, W. N., Yilmaz, O. H., Passegue, E., Yuan, G. C., Orkin, S. H., Winau, F. (February 2017) The histone demethylase UTX regulates the lineage-specific epigenetic program of invariant natural killer T cells. Nat Immunol, 18 (2). pp. 184-195. ISSN 1529-2916 (Electronic)1529-2908 (Linking)

Bhattacharjee, S., Nandi, S. (October 2017) DNA damage response and cancer therapeutics through the lens of the Fanconi Anemia DNA repair pathway. Cell Commun Signal, 15 (1). p. 41. ISSN 1478-811x

Bhattacharjee, S., Nandi, S. (December 2017) Synthetic lethality in DNA repair network: A novel avenue in targeted cancer therapy and combination therapeutics. IUBMB Life, 69 (12). pp. 929-937. ISSN 1521-6543

Bienvenu, François, Akcay, Erol, Legendre, Stéphane, McCandlish, David (June 2017) The genealogical decomposition of a matrix population model with applications to the aggregation of stages. Theoretical Population Biology, 115. pp. 69-80.

Biffi, G., Tuveson, D. A. (February 2017) Cancer: Double trouble for tumours. Nature, 542 (7639). pp. 34-35. ISSN 1476-4687 (Electronic)0028-0836 (Linking)

Borniger, J. C., Don, R. F., Zhang, N., Boyd, R. T., Nelson, R. J. (September 2017) Enduring effects of perinatal nicotine exposure on murine sleep in adulthood. Am J Physiol Regul Integr Comp Physiol, 313 (3). R280-R289. ISSN 1522-1490 (Electronic)0363-6119 (Linking)

Borniger, J. C., Nelson, R. J. (January 2017) Photoperiodic regulation of behavior: Peromyscus as a model system. Semin Cell Dev Biol, 61. pp. 82-91. ISSN 1096-3634 (Electronic)1084-9521 (Linking)

Borniger, J. C., Walker Ii, W. H., Gaudier-Diaz, M. M., Stegman, C. J., Zhang, N., Hollyfield, J. L., Nelson, R. J., DeVries, A. C. (January 2017) Time-of-Day Dictates Transcriptional Inflammatory Responses to Cytotoxic Chemotherapy. Sci Rep, 7. p. 41220. ISSN 2045-2322 (Electronic)2045-2322 (Linking)

Borniger, Jeremy C., Cisse, Yasmine-Marie, Surbhi, Nelson, R. J. (June 2017) Reciprocal Regulation of Circadian Rhythms and Immune Function. Current Sleep Medicine Reports, 3 (2). pp. 93-103.

Bowman, J. L., Kohchi, T., Yamato, K. T., Jenkins, J., Shu, S., Ishizaki, K., Yamaoka, S., Nishihama, R., Nakamura, Y., Berger, F., Adam, C., Aki, S. S., Althoff, F., Araki, T., Arteaga-Vazquez, M. A., Balasubrmanian, S., Barry, K., Bauer, D., Boehm, C. R., Briginshaw, L., Caballero-Perez, J., Catarino, B., Chen, F., Chiyoda, S., Chovatia, M., Davies, K. M., Delmans, M., Demura, T., Dierschke, T., Dolan, L., Dorantes-Acosta, A. E., Eklund, D. M., Florent, S. N., Flores-Sandoval, E., Fujiyama, A., Fukuzawa, H., Galik, B., Grimanelli, D., Grimwood, J., Grossniklaus, U., Hamada, T., Haseloff, J., Hetherington, A. J., Higo, A., Hirakawa, Y., Hundley, H. N., Ikeda, Y., Inoue, K., Inoue, S. I., Ishida, S., Jia, Q., Kakita, M., Kanazawa, T., Kawai, Y., Kawashima, T., Kennedy, M., Kinose, K., Kinoshita, T., Kohara, Y., Koide, E., Komatsu, K., Kopischke, S., Kubo, M., Kyozuka, J., Lagercrantz, U., Lin, S. S., Lindquist, E., Lipzen, A. M., Lu, C. W., De Luna, E., Martienssen, R. A., Minamino, N., Mizutani, M., Mizutani, M., Mochizuki, N., Monte, I., Mosher, R., Nagasaki, H., Nakagami, H., Naramoto, S., Nishitani, K., Ohtani, M., Okamoto, T., Okumura, M., Phillips, J., Pollak, B., Reinders, A., Rovekamp, M., Sano, R., Sawa, S., Schmid, M. W., Shirakawa, M., Solano, R., Spunde, A., Suetsugu, N., Sugano, S., Sugiyama, A., Sun, R., Suzuki, Y., Takenaka, M. (October 2017) Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome. Cell, 171 (2). 287-304.e15. ISSN 0092-8674

Breschi, A., Gingeras, T. R., Guigo, R. (July 2017) Comparative transcriptomics in human and mouse. Nat Rev Genet, 18 (7). pp. 425-440. ISSN 1471-0056

Bronstein, R., Kyle, J., Abraham, A. B., Tsirka, S. E. (May 2017) Neurogenic to Gliogenic Fate Transition Perturbed by Loss of HMGB2. Front Mol Neurosci, 10. p. 153. ISSN 1662-5099

Brown, Fiona C, Cifani, Paolo, Drill, Esther, He, Jie, Still, Eric, Zhong, Shan, Balasubramanian, Sohail, Pavlick, Dean, Yilmazel, Bahar, Knapp, Kristina M, Alonzo, Todd A, Meshinchi, Soheil, Stone, Richard M, Kornblau, Steven M, Marcucci, Guido, Gamis, Alan S, Byrd, John C, Gonen, Mithat, Levine, Ross L, Kentsis, Alex (January 2017) Genomics of primary chemoresistance and remission induction failure in paediatric and adult acute myeloid leukaemia. British Journal of Haematology, 176 (1). pp. 86-91. ISSN 0007-1048

Buscaglia, Jonathan M., Bucobo, Juan Carlos, Tiriac, Herve, Tzimas, Demetrios, Grewal, Suman, LaComb, Joseph, Rowehl, Leahana, Nagula, Satish, Wu, Maoxin, Kim, Joseph, Sasson, Aaron, Li, Ellen, Young, Candice M., Tuveson, David A. (May 2017) 111 Successful Creation of Pancreatic Cancer Organoids By Means of Eus-Guided Fine-Needle Biopsy (EUS-FNB) for Personalized Cancer Treatment. Gastrointestinal Endoscopy, 85 (5, Sup). AB50-AB51. ISSN 0016-5107

Calvert, A. E., Chalastanis, A., Wu, Y., Hurley, L. A., Kouri, F. M., Bi, Y., Kachman, M., May, J. L., Bartom, E., Hua, Y., Mishra, R. K., Schiltz, G. E., Dubrovskyi, O., Mazar, A. P., Peter, M. E., Zheng, H., James, C. D., Burant, C. F., Chandel, N. S., Davuluri, R. V., Horbinski, C., Stegh, A. H. (May 2017) Cancer-Associated IDH1 Promotes Growth and Resistance to Targeted Therapies in the Absence of Mutation. Cell Rep, 19 (9). pp. 1858-1873.

Cancer Genome Atlas ResearchNetwork, (November 2017) Comprehensive and Integrated Genomic Characterization of Adult Soft Tissue Sarcomas. Cell, 171 (4). 950-965.e28. ISSN 0092-8674

Cassidy, Michael R, Gholami, Sepideh, Strong, Vivian E (April 2017) Minimally Invasive Surgery: The Emerging Role in Gastric Cancer. Surgical Oncology Clinics of North America, 26 (2). pp. 193-212. ISSN 1055-3207

Chalk, M., Masset, P., Gutkin, B., Deneve, S. (June 2017) Sensory noise predicts divisive reshaping of receptive fields. PLoS Comput Biol, 13 (6). e1005582. ISSN 1553-734x

Chang, An-Yun, Castel, Stephane E., Ernst, Evan, Kim, Hyun Soo, Martienssen, Robert A. (June 2017) The Conserved RNA Binding Cyclophilin, Rct1, Regulates Small RNA Biogenesis and Splicing Independent of Heterochromatin Assembly. Cell Reports, 19 (12). pp. 2477-2489. ISSN 2211-1247

Chen, Yuncong, McElvain, Lauren, Tolpygo, Alex, Ferrante, Daniel, Karten, Harvey, Mitra, Partha, Kleinfeld, David, Freund, Yoav (February 2017) The Active Atlas: Combining 3D Anatomical Models with Texture Detectors. arXiv. (Submitted)

Chen, M., Nowak, D. G., Narula, N., Robinson, B., Watrud, K., Ambrico, A., Herzka, T. M., Zeeman, M. E., Minderer, M., Zheng, W., Ebbesen, S. H., Plafker, K. S., Stahlhut, C., Wang, V. M., Wills, L., Nasar, A., Castillo-Martin, M., Cordon-Cardo, C., Wilkinson, J. E., Powers, S., Sordella, R., Altorki, N. K., Mittal, V., Stiles, B. M., Plafker, S. M., Trotman, L. C. (March 2017) The nuclear transport receptor Importin-11 is a tumor suppressor that maintains PTEN protein. J Cell Biol, 216 (3). pp. 641-656. ISSN 0021-9525

Chen, Y., McElvain, L., Tolpygo, A., Ferrante, D., Karten, H., Mitra, P., Kleinfeld, D., Freund, Y. (2017) The active atlas: Combining 3D anatomical models with texture detectors. Lecture Notes in Computer Science, 10433. pp. 3-11. ISSN 978-331966181-0

Cheng, Y., Xu, J., Arnone, D., Nie, B., Yu, H., Jiang, H., Bai, Y., Luo, C., Campbell, R. A., Shan, B., Xu, L., Xu, X. (February 2017) Resting-state brain alteration after a single dose of SSRI administration predicts 8-week remission of patients with major depressive disorder. Psychol Med, 47 (3). pp. 438-450. ISSN 1469-8978 (Electronic)0033-2917 (Linking)

Chio, I. I. C., Jafarnejad, S. M., Ponz-Sarvise, M., Park, Y., Rivera, K., Palm, W., Ohlund, D., Hammell, M., Crawford, H., Schmidt, E., Thompson, C., Pappin, D., Sonenberg, N., Tuveson, D. (March 2017) NRF2 promotes tumor maintenance by modulating mRNA translation in pancreatic cancer. Cancer Research, 77 (Supple). ISSN 0008-54721538-7445

Chio, II, Tuveson, D. A. (January 2017) ROS in translation: Chink in the armor. Cell Cycle, 16 (4). pp. 297-298. ISSN 1551-4005

Chio, Iok In Christine, Tuveson, David A. (May 2017) ROS in Cancer: The Burning Question. Trends in Molecular Medicine, 23 (5). pp. 411-429. ISSN 1471-4914

Chomet, Paul, Martienssen, Rob (September 2017) Barbara McClintock’s Final Years as Nobelist and Mentor: A Memoir. Cell, 170 (6). pp. 1049-1054. ISSN 0092-8674

Cifani, Paolo, Kentsis, Alex (November 2017) High Sensitivity Quantitative Proteomics Using Automated Multidimensional Nano-flow Chromatography and Accumulated Ion Monitoring on Quadrupole-Orbitrap-Linear Ion Trap Mass Spectrometer. Molecular and Cellular Proteomics, 16 (11). pp. 2006-2016. ISSN 1535-9476

Cifani, Paolo, Kentsis, Alex (January 2017) Towards comprehensive and quantitative proteomics for diagnosis and therapy of human disease. Proteomics, 17 (1-2). p. 1600079. ISSN 1615-9853

Cifani, Paolo, Shakiba, Mojdeh, Chhangawala, Sagar, Kentsis, Alex (December 2017) ProteoModlR for functional proteomic analysis. BMC Bioinformatics, 18 (1). ISSN 1471-2105

Cluntun, A. A., Lukey, M. J., Cerione, R. A., Locasale, J. W. (March 2017) Glutamine Metabolism in Cancer: Understanding the Heterogeneity. Trends Cancer, 3 (3). pp. 169-180. ISSN 2405-8033

Conn, A., Pedmale, U. V., Chory, J., Navlakha, S. (July 2017) High-Resolution Laser Scanning Reveals Plant Architectures that Reflect Universal Network Design Principles. Cell Syst, 5 (1). 53-62.e3. ISSN 2405-4712 (Print)2405-4712

Connell, C. M., Raby, S., Beh, I., Flint, T., Williams, E., Fearon, D. T., Jodrell, D. I., Janowitz, T. (July 2017) Cancer immunotherapy trial registrations increase exponentially but chronic immunosuppressive glucocorticoid therapy may compromise outcomes. Ann Oncol, 28 (7). pp. 1678-1679. ISSN 0923-7534

Corrie, P., Qian, W., Gopinathan, A., Williams, M., Brais, R., Valle, J. W., Basu, B., Falk, S., Iwuji, C., Wasan, H., Palmer, D., Scott-Brown, M., Wadsley, J., Arif, S., Bax, L., Bundi, P., Skells, R., Neesse, A., Tuveson, D., Jodrell, D. (September 2017) Strong tumour cytidine deaminase (CDA) staining predicts for improved survival associated with sequential nab-Paclitaxel (nabP) and gemcitabine (GEM) chemotherapy as first line treatment of patients (pts) with metastatic pancreatic adenocarcinoma (mPDAC). Annals of Oncology, 28 (Supple). 73P. ISSN 0923-7534

Crow, M., Paul, A., Huang, J., Gillis, J. (October 2017) USING SINGLE CELL RNA-SEQ TO EXPLORE CELL-TYPE SPECIFIC CO-EXPRESSION OF NEUROPSYCHIATRIC DISEASE GENES. European Neuropsychopharmacology, 27. abstract S350-S350. ISSN 0924-977X

Daneshjou, R., Wang, Y., Bromberg, Y., Bovo, S., Martelli, P. L., Babbi, G., Lena, P. D., Casadio, R., Edwards, M., Gifford, D., Jones, D. T., Sundaram, L., Bhat, R., Li, X., Pal, L. R., Kundu, K., Yin, Y., Moult, J., Jiang, Y., Pejaver, V., Pagel, K. A., Li, B., Mooney, S. D., Radivojac, P., Shah, S., Carraro, M., Gasparini, A., Leonardi, E., Giollo, M., Ferrari, C., Tosatto, S. C. E., Bachar, E., Azaria, J. R., Ofran, Y., Unger, R., Niroula, A., Vihinen, M., Chang, B., Wang, M. H., Franke, A., Petersen, B. S., Pirooznia, M., Zandi, P., McCombie, R., Potash, J. B., Altman, R., Klein, T. E., Hoskins, R., Repo, S., Brenner, S. E., Morgan, A. A. (September 2017) Working towards precision medicine: predicting phenotypes from exomes in the Critical Assessment of Genome Interpretation (CAGI) challenges. Hum Mutat, 38 (9). pp. 1182-1192. ISSN 1059-7794

Darrow, S. M., Hirschtritt, M. E., Davis, L. K., Illmann, C., Osiecki, L., Grados, M., Sandor, P., Dion, Y., King, R., Pauls, D., Budman, C. L., Cath, D. C., Greenberg, E., Lyon, G. J., Yu, D., McGrath, L. M., McMahon, W. M., Lee, P. C., Delucchi, K. L., Scharf, J. M., Mathews, C. A. (April 2017) Identification of Two Heritable Cross-Disorder Endophenotypes for Tourette Syndrome. Am J Psychiatry, 174 (4). pp. 387-396. ISSN 1535-7228 (Electronic)0002-953X (Linking)

Darrow, Sabrina M., Grados, Marco, Sandor, Paul, Hirschtritt, Matthew E., Illmann, Cornelia, Osiecki, Lisa, Dion, Yves, King, Robert, Pauls, David, Budman, Cathy L., Cath, Danielle C., Greenberg, Erica, Lyon, Gholson J., McMahon, William M., Lee, Paul C., Delucchi, Kevin L., Scharf, Jeremiah M., Mathews, Carol A. (July 2017) Autism Spectrum Symptoms in a Tourette Syndrome Sample. Journal of the American Academy of Child & Adolescent Psychiatry, 56 (7). pp. 610-617. ISSN 0890-8567

Dasgupta, S., Stevens, C. F., Navlakha, S. (November 2017) A neural algorithm for a fundamental computing problem. Science, 358 (6364). pp. 793-796. ISSN 0036-8075 (Public Dataset)

Deagle, Rebecca C, Wee, Tse-Luen Erika, Brown, Claire M (August 2017) Reproducibility in light microscopy: Maintenance, standards and SOPs. International Journal of Biochemistry and Cell Biology, 89. pp. 120-124. ISSN 1357-2725

Delas, M. J., Hannon, G. J. (July 2017) lncRNAs in development and disease: from functions to mechanisms. Open Biol, 7 (7). ISSN 2046-2441

Delas, M. J., Sabin, L. R., Dolzhenko, E., Knott, S. R., Munera Maravilla, E., Jackson, B. T., Wild, S. A., Kovacevic, T., Stork, E. M., Zhou, M., Erard, N., Lee, E., Kelley, D. R., Roth, M., Barbosa, I. S. A., Zuber, J., Rinn, J. L., Smith, A. D., Hannon, G. J. (September 2017) lncRNA requirements for mouse acute myeloid leukemia and normal differentiation. Elife, 6. e25607. ISSN 2050-084x

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Sheridan, M. A., Yunusov, D., Balaraman, V., Alexenko, A. P., Yabe, S., Verjovski-Almeida, S., Schust, D. J., Franz, A. W., Sadovsky, Y., Ezashi, T., Roberts, R. M. (February 2017) Vulnerability of primitive human placental trophoblast to Zika virus. Proc Natl Acad Sci U S A, 114 (9). E1587-e1596. ISSN 0027-8424

Shuvaev, Sergey, Giaffar, Hamza, Koulakov, Alexei A (December 2017) Representations of Sound in Deep Learning of Audio Features from Music. arXiv. (Submitted)

Shuvaev, S. A., Lazutkin, A. A., Kedrov, A. V., Anokhin, K. V., Enikolopov, G. N., Koulakov, A. A. (2017) DALMATIAN: An Algorithm for Automatic Cell Detection and Counting in 3D. Front Neuroanat, 11. p. 117. ISSN 1662-5129 (Print)1662-5129

Silverman, S. M., Moses, J. E., Sharpless, K. B. (January 2017) Reengineering Antibiotics to Combat Bacterial Resistance: Click Chemistry [1,2,3]-Triazole Vancomycin Dimers with Potent Activity against MRSA and VRE. Chemistry, 23 (1). pp. 79-83. ISSN 0947-6539

Singh, D. K., Kollipara, R. K., Vemireddy, V., Yang, X. L., Sun, Y., Regmi, N., Klingler, S., Hatanpaa, K. J., Raisanen, J., Cho, S. K., Sirasanagandla, S., Nannepaga, S., Piccirillo, S., Mashimo, T., Wang, S., Humphries, C. G., Mickey, B., Maher, E. A., Zheng, H., Kim, R. S., Kittler, R., Bachoo, R. M. (January 2017) Oncogenes Activate an Autonomous Transcriptional Regulatory Circuit That Drives Glioblastoma. Cell Rep, 18 (4). pp. 961-976. ISSN 2211-1247 (Electronic)

Singh, Dinesh K., Kollipara, Rahul K., Vemireddy, Vamsidara, Yang, Xiao-Li, Sun, Yuxiao, Regmi, Nanda, Klingler, Stefan, Hatanpaa, Kimmo J., Raisanen, Jack, Cho, Steve K., Sirasanagandla, Shyam, Nannepaga, Suraj, Piccirillo, Sara, Mashimo, Tomoyuki, Wang, Shan, Humphries, Caroline G., Mickey, Bruce, Maher, Elizabeth A., Zheng, Hongwu, Kim, Ryung S., Kittler, Ralf, Bachoo, Robert M. (January 2017) Oncogenes Activate an Autonomous Transcriptional Regulatory Circuit That Drives Glioblastoma. Cell Reports, 18 (4). pp. 961-976. ISSN 2211-1247

Sinha, S., Fu, Y. Y., Grimont, A., Ketcham, M., Lafaro, K. J., Saglimbeni, J. A., Askan, G., Bailey, J. M., Melchor, J. P., Zhong, Y., Joo, M. G., Grbovic-Huezo, O., Yang, I. H., Basturk, O., Baker, L., Park, Y., Kurtz, R. C., Tuveson, D. A., Leach, S. D., Pasricha, P. (April 2017) PanIN neuroendocrine cells promote tumorigenesis via neuronal crosstalk. Cancer Res, 77 (8). pp. 1868-1879. ISSN 1538-7445 (Electronic)0008-5472 (Linking)

Sivaramakrishnan, M., McCarthy, K. D., Campagne, S., Huber, S., Meier, S., Augustin, A., Heckel, T., Meistermann, H., Hug, M. N., Birrer, P., Moursy, A., Khawaja, S., Schmucki, R., Berntenis, N., Giroud, N., Golling, S., Tzouros, M., Banfai, B., Duran-Pacheco, G., Lamerz, J., Hsiu Liu, Y., Luebbers, T., Ratni, H., Ebeling, M., Clery, A., Paushkin, S., Krainer, A. R., Allain, F. H., Metzger, F. (November 2017) Binding to SMN2 pre-mRNA-protein complex elicits specificity for small molecule splicing modifiers. Nat Commun, 8 (1). p. 1476. ISSN 2041-1723

Skopelitis, Damianos S., Benkovics, Anna H., Husbands, Aman Y., Timmermans, Marja C. P. (November 2017) Boundary Formation through a Direct Threshold-Based Readout of Mobile Small RNA Gradients. Developmental Cell, 43 (3). pp. 265-273. ISSN 1534-5807

Smedley, C. J., Barrow, A. S., Spiteri, C., Giel, M. C., Sharma, P., Moses, J. E. (July 2017) Sulfur-Fluoride Exchange (SuFEx)-Mediated Synthesis of Sterically Hindered and Electron-Deficient Secondary and Tertiary Amides via Acyl Fluoride Intermediates. Chemistry, 23 (42). pp. 9990-9995. ISSN 0947-6539

Soyk, S., Muller, N. A., Park, S. J., Schmalenbach, I., Jiang, K., Hayama, R., Zhang, L., Van Eck, J., Jimenez-Gomez, J. M., Lippman, Z. B. (January 2017) Variation in the flowering gene SELF PRUNING 5G promotes day-neutrality and early yield in tomato. Nat Genet, 49 (1). pp. 162-168. ISSN 1546-1718 (Electronic)1061-4036 (Linking) (Public Dataset)

Soyk, Sebastian, Lemmon, Zachary H., Oved, Matan, Fisher, Josef, Liberatore, Katie L., Park, Soon Ju, Goren, Anna, Jiang, Ke, Ramos, Alexis, van der Knaap, Esther, Van Eck, Joyce, Zamir, Dani, Eshed, Yuval, Lippman, Zachary B. (June 2017) Bypassing Negative Epistasis on Yield in Tomato Imposed by a Domestication Gene. Cell, 169 (6). pp. 1142-1155. ISSN 0092-8674

Spector, D. L. (April 2017) The Role of Long Non-Coding RNAs in Nuclear Organization and Disease. Faseb Journal, 31 (Supple). Meeting Abstract 255.2. ISSN 0892-66381530-6860

Stacchiotti, S., Mir, O., Le Cesne, A., Vincenzi, B., Fedenko, A., Maki, R. G., Somaiah, N., Patel, S., Brahmi, M., Blay, J. Y., Boye, K., Sundby Hall, K., Gelderblom, H., Hindi, N., Martin-Broto, J., Kosela, H., Rutkowski, P., Italiano, A., Duffaud, F., Kobayashi, E., Casali, P. G., Provenzano, S., Kawai, A. (July 2017) Activity of Pazopanib and Trabectedin in Advanced Alveolar Soft Part Sarcoma. Oncologist. ISSN 1083-7159

Stanley, Robert, Martin, Pierre-Marie, Ross, Adam, Freitas, Andiara, Iafrati, Jillian, Moyer, Caitlin, Brumback, Audrey, Pirooznia, Mehdi, McCombie, W. Richard, Potash, James, Zandi, Peter, Purcell, Shaun, Sanders, Stephan, Zuo, Yi, Sohal, Vikaas, Cheyette, Benjamin (May 2017) Wnt/β-Catenin Pathway Contributions to Dendritic Spine and Glutamatergic Synapse Formation Responsive to Lithium-Mediated GSK3 Inhibition. Biological Psychiatry, 81 (10, Su). S286. ISSN 0006-3223

Starosta, Sarah, Bartetzko, Isabelle, Stüttgen, Maik C., Güntürkün, Onur (October 2017) Integration of contextual cues into memory depends on “prefrontal” N-methyl-D-aspartate receptors. Neurobiology of Learning and Memory, 144 (Supple). pp. 19-26. ISSN 1074-7427

Stoltzfus, A., McCandlish, D. M. (September 2017) Mutational biases influence parallel adaptation. Mol Biol Evol, 34 (9). pp. 2163-2172. ISSN 0737-4038

Strong, Vivian E, Gholami, Sepideh, Shah, Manish A, Tang, Laura H, Janjigian, Yelena Y, Schattner, Mark, Selby, Luke V, Yoon, Sam S, Salo-Mullen, Erin, Stadler, Zsofia K, Kelsen, David, Brennan, Murray F, Coit, Daniel G (December 2017) Total Gastrectomy for Hereditary Diffuse Gastric Cancer at a Single Center: Postsurgical Outcomes in 41 Patients. Annals of Surgery, 266 (6). pp. 1006-1012. ISSN 0003-4932

TCW, J., Carvalho, C. M. B., Yuan, B., Gu, S., Altheimer, A. N., McCarthy, S., Malhotra, D., Sebat, J., Siegel, A. J., Rudolph, U., Lupski, J. R., Levy, D. L., Brennand, K. J. (March 2017) Divergent Levels of Marker Chromosomes in an hiPSC-Based Model of Psychosis. Stem Cell Reports, 8 (3). pp. 519-528.

Tai, Y., Jia, Y. (May 2017) TRPC Channels and Neuron Development, Plasticity, and Activities. Adv Exp Med Biol, 976. pp. 95-110. ISSN 0065-2598 (Print)0065-2598

Tai, Y., Yang, S., Liu, Y., Shao, W. (May 2017) TRPC Channels in Health and Disease. Adv Exp Med Biol, 976. pp. 35-45. ISSN 0065-2598 (Print)0065-2598

Takikawa, M., Tarumoto, Y., Ishikawa, F. (February 2017) Fission yeast Stn1 is crucial for semi-conservative replication at telomeres and subtelomeres. Nucleic Acids Res, 45 (3). pp. 1255-1269. ISSN 0305-1048

Taniguchi, Y., Kawata, M., Ho Chang, S., Mori, D., Okada, K., Kobayashi, H., Sugita, S., Hosaka, Y., Inui, H., Taketomi, S., Yano, F., Ikeda, T., Akiyama, H., Mills, A. A., Chung, U. I., Tanaka, S., Kawaguchi, H., Saito, T. (March 2017) Regulation of Chondrocyte Survival in Mouse Articular Cartilage by p63. Arthritis and Rheumatology, 69 (3). pp. 598-609. ISSN 2326-5205

Tawbi, H. A., Burgess, M., Bolejack, V., Van Tine, B. A., Schuetze, S. M., Hu, J., D'Angelo, S., Attia, S., Riedel, R. F., Priebat, D. A., Movva, S., Davis, L. E., Okuno, S. H., Reed, D. R., Crowley, J., Butterfield, L. H., Salazar, R., Rodriguez-Canales, J., Lazar, A. J., Wistuba, II, Baker, L. H., Maki, R. G., Reinke, D., Patel, S. (November 2017) Pembrolizumab in advanced soft-tissue sarcoma and bone sarcoma (SARC028): a multicentre, two-cohort, single-arm, open-label, phase 2 trial. Lancet Oncol, 18 (11). pp. 1493-1501. ISSN 1470-2045

Thompson, D., Morrice, N., Grant, L., Le Sommer, S., Lees, E. K., Tonks, N. K., Mody, N., Wilson, H. M., Delibegovic, M. (March 2017) Genetic deletion and pharmacological inhibition of macrophage protein tyrosine phosphatase 1B (PTP1B) improves global glucose and lipid homeostasis and protects against atherosclerotic plaque formation in mouse models of atherosclerosis. Diabetic Medicine, 34 (Supple). pp. 26-27. ISSN 0742-3071

Thomson, P., Duff, B., McCarthy, S., Ryan, N. M., Whalley, H. C., de la Bastide, M., Morris, S. W., McIntosh, A. M., Evans, K. L., Lawrie, S. M., Blackwood, D. H. R., McCombie, W. R., Porteous, D. J. (October 2017) CLINICAL AND GENETIC RE-EVALUATION OF THE SCOTTISH DISCI TRANSLOCATION FAMILY. European Neuropsychopharmacology, 27 (Supple). Meeting Abstract 37; S276-S277. ISSN 0924-977X

Tocilj, A., On, K. F., Yuan, Z., Sun, J., Elkayam, E., Li, H., Stillman, B., Joshua-Tor, L. (January 2017) Structure of the active form of human Origin Recognition Complex and its ATPase motor module. Elife, 6. ISSN 2050-084X (Electronic)2050-084X (Linking) (Public Dataset)

Tonelli, C., Chio, I. I. C., Tuveson, D. A. (September 2017) Transcriptional regulation by Nrf2. Antioxid Redox Signal. ISSN 1523-0864

Turco, G. M., Kajala, K., Kunde-Ramamoorthy, G., Ngan, C. Y., Olson, A., Deshphande, S., Tolkunov, D., Waring, B., Stelpflug, S., Klein, P., Schmutz, J., Kaeppler, S., Ware, D., Wei, C. L., Etchells, J. P., Brady, S. M. (May 2017) DNA methylation and gene expression regulation associated with vascularization in Sorghum bicolor. New Phytol, 214 (3). pp. 1213-1229. ISSN 0028-646x (Public Dataset)

Tuveson, D. (April 2017) Waging war against pancreatic cancer: an interview with David Tuveson. Dis Model Mech, 10 (4). pp. 353-357. ISSN 1754-8403

Tzelepis, K., Barbieri, I., Pandolfini, L., Shi, J., Robson, S. C., Migliori, V., Bannister, A. J., Han, N., De Braekeleer, E., Ponstingl, H., Vakoc, C. R., Vassiliou, G. S., Kouzarides, T. (June 2017) Mettl3 controls translation of target mRNAs by n6 methylation of adenosine residues in their coding sequence and constitutes a novel therapeutic vulnerability of acute myeloid leukaemia. Haematologica, 102 (Supple). pp. 154-155. ISSN 0390-6078

Underwood, Charles J., Henderson, Ian R., Martienssen, Robert A. (April 2017) Genetic and epigenetic variation of transposable elements in Arabidopsis. Current Opinion in Plant Biology, 36. pp. 135-141. ISSN 1369-5266

Vakoc, C. R., Tuveson, D. A. (October 2017) Soils and Seeds That Initiate Pancreatic Cancer Metastasis. Cancer Discov, 7 (10). pp. 1067-1068. ISSN 2159-8274

Vakoc, C. R., Tuveson, D. A. (February 2017) Untangling the genetics from the epigenetics in pancreatic cancer metastasis. Nat Genet, 49 (3). pp. 323-324. ISSN 1061-4036

Valentino, Rita J, Guyenet, Patrice, Hou, Xun Helen, Herman, Melissa (November 2017) Central Network Dynamics Regulating Visceral and Humoral Functions. The Journal of Neuroscience, 37 (45). pp. 10848-10854. ISSN 0270-6474

Van Eck, J., Swartwood, K., Lemmon, Z. H., Dalrymple, J., Lippman, Z. B. (June 2017) Development of Agrobacterium-mediated Transformation of Physalis peruviana and Application of CRISPR/Cas9 Genome Editing. In Vitro Cellular & Developmental Biology-Animal, 53 (Supple). S34-S35. ISSN 1071-2690

Vogt, D., Cho, K. K. A., Shelton, S. M., Paul, A., Huang, Z. J., Sohal, V. S., Rubenstein, J. L. R. (September 2017) Mouse Cntnap2 and Human CNTNAP2 ASD Alleles Cell Autonomously Regulate PV+ Cortical Interneurons. Cereb Cortex, 28 (11). pp. 3868-3879. ISSN 1047-3211

Vurture, G. W., Sedlazeck, F. J., Nattestad, M., Underwood, C. J., Fang, H., Gurtowski, J., Schatz, M. C. (July 2017) GenomeScope: Fast reference-free genome profiling from short reads. Bioinformatics, 33 (14). pp. 2202-2204. ISSN 1367-4803

Walker II, W. H., Borniger, J. C., Surbhi, . , Zalenski, A. A., Muscarella, S. L., Fitzgerald, J. A., Zhang, N., Gaudier-Diaz, M. M., DeVries, A. C. (August 2017) Mammary Tumors Induce Central Pro-inflammatory Cytokine Expression, but Not Behavioral Deficits in Balb/C Mice. Sci Rep, 7 (1). p. 8152. ISSN 2045-2322 (Electronic)2045-2322 (Linking)

Wear, E. E., Song, J., Zynda, G., LeBlanc, C., Lee, T. J., Mickelson-Young, L., Concia, L., Mulvaney, P., Szymanski, E. S., Allen, G. C., Martienssen, R., Vaughn, M. W., Hanley-Bowdoin, L., Thompson, W. (September 2017) Genomic analysis of the DNA replication timing program during mitotic S phase in maize (Zea mays L.) root tips. Plant Cell, 29 (9). pp. 2126-49. ISSN 1040-4651

Wenda, J. M., Homolka, D., Yang, Z., Spinelli, P., Sachidanandam, R., Pandey, R. R., Pillai, R. S. (June 2017) Distinct Roles of RNA Helicases MVH and TDRD9 in PIWI Slicing-Triggered Mammalian piRNA Biogenesis and Function. Dev Cell, 41 (6). 623-637.e9. ISSN 1534-5807

Williams, J. J., Teal, T. K. (January 2017) A vision for collaborative training infrastructure for bioinformatics. Ann N Y Acad Sci, 1387 (1). pp. 54-60. ISSN 1749-6632 (Electronic)0077-8923 (Linking)

Williams, Jason J, Drew, Jennifer C, Galindo-Gonzalez, Sebastian, Robic, Srebrenka, Dinsdale, Elizabeth, Morgan, William, Triplett, Eric W, Burnette, James, Donovan, Samuel, Elgin, Sarah, Fowlks, Edison R, Goodman, Anya L, Grandgenett, Nealy F, Goller, Carlos, Hauser, Charles, Jungck, John R, Newman, Jeffrey D, Pearson, William, Ryder, Elizabeth, Wilson Sayres, Melissa A, Sierk, Michael, Smith, Todd, Tosado-Acevedo, Rafael, Tapprich, William, Tobin, Tammy C, Toro, Arlín, Welch, Lonnie, Wright, Robin, Ebenbach, David, McWilliams, Mindy, Rosenwald, Anne G, Pauley, Mark A (October 2017) Barriers to Integration of Bioinformatics into Undergraduate Life Sciences Education. BioRxiv. (Unpublished)

Willsey, A. J., Fernandez, T. V., Yu, D., King, R. A., Dietrich, A., Xing, J., Sanders, S. J., Mandell, J. D., Huang, A. Y., Richer, P., Smith, L., Dong, S., Samocha, K. E., Neale, B. M., Coppola, G., Mathews, C. A., Tischfield, J. A., Scharf, J. M., State, M. W., Heiman, G. A. (May 2017) De Novo Coding Variants Are Strongly Associated with Tourette Disorder. Neuron, 94 (3). 486-499.e9. ISSN 0896-6273

Wilson, C. D., Serrano, G. O., Koulakov, A. A., Rinberg, D. (November 2017) A primacy code for odor identity. Nat Commun, 8 (1). p. 1477. ISSN 2041-1723

Wilson, J., Turna, N. S., Banks, R., Pappin, D. J. C., Zougman, A. (August 2017) Clinical applications of universal S-Trap sample processing. Molecular & Cellular Proteomics, 16 (8; Sup). S56-S56. ISSN 1535-9476

Wilson Sayres, Melissa A, Hauser, Charles, Sierk, Michael, Robic, Srebrenka, Rosenwald, Anne G, Smith, Todd M, Triplett, Eric W, Williams, Jason J, Dinsdale, Elizabeth, Morgan, William, Burnette, James M, Donovan, Samuel S, Drew, Jennifer C, Elgin, Sarah CR, Fowlks, Edison R, Galindo-Gonzalez, Sebastian, Goodman, Anya L, Grandgenett, Neal F, Goller, Carlos C, Jungck, John, Newman, Jeffrey D, Pearson, William, Ryder, Elizabeth, Tosado-Acevedo, Rafael, Tapprich, William, Tobin, Tammy C, Toro-Martínez, Arlín, Welch, Lonnie R, Wright, Robin, Ebenbach, David, Olney, Kimberly C, McWilliams, Mindy, Pauley, Mark A (August 2017) Bioinformatics Core Competencies for Undergraduate Life Sciences Education. BioRxiv. (Unpublished)

Witkowski, J. A. (2017) Introduction to The Therapeutic Implications of Muscular Dystrophy Genomics. Wellcome Witnesses to Contemporary Medicine, 62. xv-xx.

Wu, Melody V., Tollkuhn, Jessica (July 2017) Estrogen receptor alpha is required in GABAergic, but not glutamatergic, neurons to masculinize behavior. Hormones and Behavior, 95. pp. 3-12. ISSN 0018-506X

Wu, Q., Hu, Y., Sprague, S. A., Kakeshpour, T., Park, J., Nakata, P. A., Cheng, N., Hirschi, K. D., White, F. F., Park, S. (September 2017) Expression of a monothiol glutaredoxin, AtGRXS17, in tomato (Solanum lycopersicum) enhances drought tolerance. Biochem Biophys Res Commun, 491 (4). pp. 1034-1039. ISSN 0006-291x

Wu, X., Wang, S. H., Sun, J., Krainer, A. R., Hua, Y., Prior, T. W. (April 2017) A-44G transition in SMN2 intron 6 protects patients with spinal muscular atrophy. Hum Mol Genet. ISSN 0964-6906

Wu, Melody, Tollkuhn, Jessica (March 2017) Estrogen receptor alpha is required in GABAergic, but not glutamatergic, neurons to masculinize the brain. BioRxiv. (Unpublished)

Xu, Y., Vakoc, C. R. (July 2017) Targeting Cancer Cells with BET Bromodomain Inhibitors. Cold Spring Harb Perspect Med, 7 (7). ISSN 2157-1422

Yang, N., Xu, X. W., Wang, R. R., Peng, W. L., Cai, L., Song, J. M., Li, W., Luo, X., Niu, L., Wang, Y., Jin, M., Chen, L., Luo, J., Deng, M., Wang, L., Pan, Q., Liu, F., Jackson, D., Yang, X., Chen, L. L., Yan, J. (November 2017) Contributions of Zea mays subspecies mexicana haplotypes to modern maize. Nat Commun, 8 (1). p. 1874. ISSN 2041-1723

Ye, K., Iossifov, I., Levy, D., Yamrom, B., Buja, A., Krieger, A. M., Wigler, M. (July 2017) Measuring shared variants in cohorts of discordant siblings with applications to autism. Proc Natl Acad Sci U S A, 114 (27). pp. 7073-7076. ISSN 0027-8424

Yu, K., Ahrens, S., Zhang, X., Schiff, H., Ramakrishnan, C., Fenno, L., Deisseroth, K., Zhao, F., Luo, M. H., Gong, L., He, M., Zhou, P., Paninski, L., Li, B. (December 2017) The central amygdala controls learning in the lateral amygdala. Nat Neurosci, 20 (12). pp. 1680-1685. ISSN 1097-6256

Yuan, Z., Riera, A., Bai, L., Sun, J., Nandi, S., Spanos, C., Chen, Z. A., Barbon, M., Rappsilber, J., Stillman, B., Speck, C., Li, H. (March 2017) Structural basis of Mcm2-7 replicative helicase loading by ORC-Cdc6 and Cdt1. Nat Struct Mol Biol, 24 (3). pp. 316-324. ISSN 1545-9985 (Public Dataset)

Zhang, Bin, Mao, Yuntao S., Diermeier, Sarah D., Novikova, Irina V., Nawrocki, Eric P., Jones, Tom A., Lazar, Zsolt, Tung, Chang-Shung, Luo, Weijun, Eddy, Sean R., Sanbonmatsu, Karissa Y., Spector, David L. (2017) Identification and Characterization of a Class of MALAT1-like Genomic Loci. Cell Reports, 19 (8). pp. 1723-1738. ISSN 2211-1247 (Public Dataset)

Zhang, S., Fan, G., Hao, Y., Hammell, M., Wilkinson, J. E., Tonks, N. K. (October 2017) Suppression of protein tyrosine phosphatase N23 predisposes to breast tumorigenesis via activation of FYN kinase. Genes Dev, 31 (19). pp. 1939-57. ISSN 0890-9369

Zhao, X., Powers, S. (August 2017) New Views into the Genetic Landscape of Metastatic Breast Cancer. Cancer Cell, 32 (2). pp. 131-133. ISSN 15356108

Zhu, K., Liu, M., Fu, Z., Zhou, Z., Kong, Y., Liang, H., Lin, Z., Luo, J., Zheng, H., Wan, P., Zhang, J., Zen, K., Chen, J., Hu, F., Zhang, C. Y., Ren, J., Chen, X. (August 2017) Plant microRNAs in larval food regulate honeybee caste development. PLoS Genet, 13 (8). e1006946. ISSN 1553-7390

Ziolkowski, P. A., Underwood, C. J., Lambing, C., Martinez-Garcia, M., Lawrence, E. J., Ziolkowska, L., Griffin, C., Choi, K., Franklin, F. C., Martienssen, R. A., Henderson, I. R. (February 2017) Natural variation and dosage of the HEI10 meiotic E3 ligase control Arabidopsis crossover recombination. Genes Dev, 31 (3). pp. 306-317. ISSN 0890-9369

Book Section

Borniger, J. C., Cisse, Y. M., Nelson, R. J., Martin, L.B. (2017) Seasonal Variation in Stress Responses. In: Stress: Neuroendocrinology and Neurobiology. Chapter 41, 2 . Academic Press, pp. 411-419. ISBN 978-0-12-802175-0

Cumming, G. P., French, T., Hogg, J., McKendrick, D., Gilstad, H., Molik, D., Luciano, J. S. (2017) Trust and provenance in communication to ehealth consumers. In: The Digitization of Healthcare: New Challenges and Opportunities. UNSPECIFIED, pp. 189-203. ISBN 9781349951734 (ISBN); 9781349951727 (ISBN)

Wigler, MH (January 2017) The ras system in yeasts. In: The ras Superfamily of GTPases. CRC Press, pp. 155-172. ISBN 9781138105126

Monograph

Stillman, Bruce (2017) Annual Report. Project Report. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.

Conference or Workshop Item

Abdullah, Nurul Akmaryanti, Moses, John, Han, Li Chen, Storr, Sarah, Ammar, Aula, Martin, Stewart G. (July 2017) Abstract 5210: Differential cytotoxic effects of Piperlongumine analogues and their radiotherapeutic response in breast cancer. In: Proceedings of the American Association for Cancer Research Annual Meeting 2017, 2017 Apr 1-5, Washington, DC..

Balachandran, Vinod, Luksza, Marta, Zhao, Julia N, Makarov, Vladimir, Moral, John Alec, Remark, Romain, Herbst, Brian, Askan, Gokce, Bhanot, Umeshkumar, Senbabaoglu, Yasin, Wells, Danny, Cary, Charles Ian Ormsby, Grbovic-Huezo, Olivera, Attiyeh, Marc, Medina, Benjamin, Zhang, Jennifer, Loo, Jennifer, Saglimbeni, Joseph, Abu-Akeel, Mohsen, Zappasodi, Roberta, Riaz, Nadeem, Smoragiewicz, Martin, Basturk, Olca, Gonen, Mithat, Levine, Arnold J, Allen, Peter J, Fearon, Douglas T, Merad, Miriam, Gnjatic, Sacha, Iacobuzio-Donahue, Christine, Wolchok, Jedd, DeMatteo, Ronald, Greenbaum, Benjamin, Merghoub, Taha, Leach, Steven (November 2017) Identification of unique neoantigen qualities in long-term pancreatic cancer survivors. In: UNSPECIFIED.

D'Rozario, J, Suliman, M, Knoblich, K, Roberts, D, De Campos, Dias J, Astarita, J, Dutton, E, Mansell, A, Denton, A, Fearon, D, Withers, D, Barone, F, Turley, S, Boyd, R, Heng, T, Fletcher, A (May 2017) Fibroblastic reticular cells facilitate myeloid cellular crosstalk via the provision of FRC derived growth and chemotactic factors. In: UNSPECIFIED.

Furukawa, H (August 2017) Structure and pharmacology of NMDA receptors. In: ISN-ESN Meeting.

Klindt, David A, Ecker, Alexander S, Euler, Thomas, Bethge, Matthias (2017) Neural system identification for large populations separating "what" and "where". In: 31st Conference on Neural Information Processing Systems (NIPS 2017), Long Beach, CA.

Rosenfeld, Jeffrey, Goodwin, Sara, Ganesan, Shridar (2017) The use of long-read sequencing to determine the structure of the Her2 amplicon in breast cancer. In: Proceedings of the American Association for Cancer Research Annual Meeting 2017, 2017 Apr 1-5, Washington, DC..

Sivaramakrishnan, M, McCarthy, KD, Huber, S, Campagne, S, Meier, S, Augustin, A, Heckel, T, Meistermann, H, Hug, M, Birrer, P, Moursy, A, Khawaja, S, Schmucki, R, Berntenis, N, Giroud, N, Golling, S, Tzouros, M, Banfai, B, Duran-Pacheco, G, Lamerz, J, Liu, YH, Luebbers, T, Ratni, H, Clery, A, Ebeling, M, Paushkin, S, Krainer, AR, Allain, F, Metzger, F (March 2017) Binding to a novel RNA-protein complex creates specificity for small molecule splicing modifiers to treat SMA. In: 10th Neuromuscular Translational Research Conference.

Tward, DJ, Lee, B, Mitra, P, Miller, MI (July 2017) Performance of image matching in the computational anatomy gateway: CPU and GPU implementations in opencl. In: PEARC17: Proceedings of the Practice and Experience in Advanced Research Computing 2017 on Sustainability, Success and Impact.

Verleyen, Wim, Gillis, Jesse (October 2017) SAPLING: A TOOL FOR CUSTOMIZED NETWORK ANALYSIS FOCUSING ON PSYCHIATRIC GENETICS. In: 23rd Annual World Congress of Psychiatric Genetics (WCPG).

Yoshimi, Akihide, Lin, Kuan-Ting, Wiseman, Daniel, Intlekofer, Andrew M, Wang, Bo, Pastore, Alessandro, Rahman, Mohammad, Lee, Stanley Chun-Wei, Liu, Bo, Micol, Jean-Baptiste, De Botton, Stephane, Penard-Lacronique, Virginie, Shih, Alan H, Stein, Eytan M, Durham, Benjamin H, Inoue, Daichi, Zhang, Xiao Jing, Albrecht, Todd, Chung, Young Rock, Peng, Shouyong, Buonamici, Silvia, Palacino, James, Smith, Peter, Thompson, Craig B, Levine, Ross L, Wagner, Eric, Krainer, Adrian R, Abdel-Wahab, Omar (December 2017) Spliceosomal Dysfunction Is a Critical Mediator of IDH2 Mutant Leukemogenesis. In: 59th Annual Meeting of the American Society of Hematology.

Thesis

Cazakoff, B. N. (April 2017) State and Learning Dependent Changes in Olfactory Granule Cells. PhD thesis, Cold Spring Harbor Laboratory.

Delas Vives, M.J. (March 2017) Role of long noncoding RNAs in hematopoiesis. PhD thesis, Cold Spring Harbor Laboratory.

Image

adams, Tom (December 2017) Newspaper jp2000 example. [Image] (In Press)

Dataset

Krug, L., Chatterjee, N., Borges-Monroy, R., Hearn, S., Liao, W., Morrill, K., Prazak, L., Rozhkov, N., Theodorou, D., Hammell, M., Dubnau, J. (2017) Datasets from "Krug, L., Chatterjee, N., Borges-Monroy, R., Hearn, S., Liao, W. W., Morrill, K., Prazak, L., Rozhkov, N., Theodorou, D., Hammell, M., Dubnau, J. (2017) Retrotransposon activation contributes to neurodegeneration in a Drosophila TDP-43 model of ALS. PLoS Genet". [Dataset]

Zhang, B., Mao, Y. S., Diermeier, S. D., Novikova, I. V., Nawrocki, E. P., Jones, T. A., Lazar, Z., Tung, CS, Luo, W., Eddy, S. R., Sanbonmatsu, K. Y., Spector, D. L. (2017) Supplemental Dataset from Zhang, Bin, Mao, Yuntao S., Diermeier, Sarah D., Novikova, Irina V., Nawrocki, Eric P., Jones, Tom A., Lazar, Zsolt, Tung, Chang-Shung, Luo, Weijun, Eddy, Sean R., Sanbonmatsu, Karissa Y., Spector, David L. (2017) Identification and Characterization of a Class of MALAT1-like Genomic Loci. Cell Reports. [Dataset]

This list was generated on Thu Apr 18 18:14:47 2024 EDT.
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