Items where Year is 2007

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Number of items: 324.

A

Agaram, N. P., Besmer, P., Wong, G. C., Guo, T., Socci, N. D., Maki, R. G., DeSantis, D., Brennan, M. F., Singer, S., DeMatteo, R. P., Antonescu, C. R. (2007) Pathologic and molecular heterogeneity in imatinib-stable or imatinib-responsive gastrointestinal stromal tumors. Clin Cancer Res, 13 (1). pp. 170-81. ISSN 1078-0432 (Print)1078-0432 (Linking)

Aizenman, C. D., Cline, H. T. (2007) Enhanced visual activity in vivo forms nascent synapses in the developing retinotectal projection. J Neurophysiol, 97 (4). pp. 2949-57. ISSN 0022-3077 (Print)

Akerman, C. J., Cline, H. T. (2007) Refining the roles of GABAergic signaling during neural circuit formation. Trends in Neurosciences, 30 (8). pp. 382-389. ISSN 0166-2236

Allemand, E., Hastings, M. L., Murray, M. V., Myers, M. P., Krainer, A. R. (2007) Alternative splicing regulation by interaction of phosphatase PP2Cgamma with nucleic acid-binding protein YB-1. Nat Struct Mol Biol, 14 (7). pp. 630-638. ISSN 1545-9993 (Print)

Aravin, A. A., Hannon, G. J., Brennecke, J. (2007) The Piwi-piRNA Pathway Provides an Adaptive Defense in the Transposon Arms Race. Science, 318 (5851). pp. 761-764. ISSN 1095-9203 (Electronic)

Aravin, A. A., Sachidanandam, R., Girard, A., Fejes-Toth, K., Hannon, G. J. (2007) Developmentally regulated piRNA clusters implicate MILI in transposon control. Science, 316 (5825). pp. 744-7. ISSN 1095-9203 (Electronic)

Arevalo, J. C., Takahashi, T., Wu, S. H., Chao, M. V. (2007) Retention of GluR1 receptors by ARMS/Kidins220 protein results in changes in synaptic activity. Journal of Neurochemistry, 101. pp. 48-49. ISSN 0022-3042

Arnaiz, Olivier, Cain, Scott, Cohen, Jean, Sperling, Linda (2007) ParameciumDB: a community resource that integrates the Paramecium tetraurelia genome sequence with genetic data. Nucleic Acids Res, 35. D439-D444. ISSN 0305-1048

Asari, H. (2007) Auditory System Characterization. PhD thesis, Cold Spring Harbor Laboratory.

Asztalos, Z., Arora, N., Tully, T. (2007) Olfactory jump reflex habituation in Drosophila and effects of classical conditioning mutations. J Neurogenet, 21 (1). pp. 1-18. ISSN 0167-7063 (Print)

Asztalos, Z., Baba, K., Yamamoto, D., Tully, T. (2007) The Fickle mutatation of a cytoplasmic tyrosine kinase effects sensitization but not dishabituation in Drosophila melanogaster. J Neurogenet, 21 (1). pp. 59-71. ISSN 0167-7063 (Print)

Atwal, G. S., Bond, G. L., Metsuyanim, S., Papa, M., Friedman, E., Distelman-Menachem, T., Ben Asher, E., Lancet, D., Ross, D. A., Sninsky, J., White, T. J., Levine, A. J., Yarden, R. (2007) Haplotype structure and selection of the MDM2 oncogene in humans. Proc Natl Acad Sci U S A, 104 (11). pp. 4524-9. ISSN 0027-8424 (Print) 0027-8424 (Linking)

Atwal, G. S. (2007) Correlations in Complex Disease Association Studies. UNSPECIFIED.

B

Bagchi, A., Papazoglu, C., Wu, Y., Capurso, D., Brodt, M., Francis, D., Bredel, M., Vogel, H., Mills, A. A. (2007) CHD5 Is a Tumor Suppressor at Human 1p36. Cell, 128 (3). pp. 459-475.

Bannigan, A., Scheible, W. R., Lukowitz, W., Fagerstrom, C., Wadsworth, P., Somerville, C., Baskin, T. I. (2007) A conserved role for kinesin-5 in plant mitosis. Journal of Cell Science, 120 (16). pp. 2819-2827. ISSN 0021-9533

Bassuner, B. M., Lam, R., Lukowitz, W., Yeung, E. C. (2007) Auxin and root initiation in somatic embryos of Arabidopsis. Plant Cell Reports, 26 (1). pp. 1-11. ISSN 0721-7714

Bieri, T., Blasiar, D., Ozersky, P., Antoshechkin, I., Bastiani, C., Canaran, P., Chan, J., Chen, N., Chen, W. J., Davis, P., Fiedler, T. J., Girard, L. R., Han, M., Harris, T. W., Kishore, R., Lee, R., McKay, S. J., Müller, H- M., Nakamura, C., Petcherski, A., Rangarajan, A., Rogers, A., Schindelman, G., Schwarz, E. M., Spooner, W., Tuli, M. A., Van Auken, K., Wang, D., Wang, X., Williams, G., Durbin, R., Stein, L. D., Sternberg, P. W., Spieth, J. (2007) WormBase: new content and better access. Nucleic Acids Res, 35 (Databa). D506-D510. ISSN 0305-1048

Bihani, Teeru, Chicas, Agustin, Lo, Crystal Pui-Kwan, Lin, Athena W. (2007) Dissecting the senescence-like program in tumor cells activated by Ras signaling. Journal of Biological Chemistry, 282 (4). pp. 2666-2675. ISSN 0021-9258

Birney, E., Stamatoyannopoulos, J. A., Dutta, A., Guigó, R., Gingeras, T. R., Margulies, E. H., Weng, Z., Snyder, M., Dermitzakis, E. T., Thurman, R. E., Kuehn, M. S., Taylor, C. M., Neph, S., Koch, C. M., Asthana, S., Malhotra, A., Adzhubei, I., Greenbaum, J. A., Andrews, R. M., Flicek, P., Boyle, P. J., Cao, H., Carter, N. P., Clelland, G. K., Davis, S., Day, N., Dhami, P., Dillon, S. C., Dorschner, M. O., Fiegler, H., Giresi, P. G., Goldy, J., Hawrylycz, M., Haydock, A., Humbert, R., James, K. D., Johnson, B. E., Johnson, E. M., Frum, T. T., Rosenzweig, E. R., Karnani, N., Lee, K., Lefebvre, G. C., Navas, P. A., Neri, F., Parker, S. C. J., Sabo, P. J., Sandstrom, R., Shafer, A., Vetrie, D., Weaver, M., Wilcox, S., Yu, M., Collins, F. S., Dekker, J., Lieb, J. D., Tullius, T. D., Crawford, G. E., Sunyaev, S., Noble, W. S., Dunham, I., Denoeud, F., Reymond, A., Kapranov, P., Rozowsky, J., Zheng, D., Castelo, R., Frankish, A., Harrow, J., Ghosh, S., Sandelin, A., Hofacker, I. L., Baertsch, R., Keefe, D., Dike, S., Cheng, J., Hirsch, H. A., Sekinger, E. A., Lagarde, J., Abril, J. F., Shahab, A., Flamm, C., Fried, C., Hackermüller, J., Hertel, J., Lindemeyer, M., Missal, K., Tanzer, A., Washietl, S., Korbel, J., Emanuelsson, O., Pedersen, J. S., Holroyd, N., Taylor, R., Swarbreck, D., Matthews, N., Dickson, M. C., Thomas, D. J., Weirauch, M. T., Gilbert, J., Siepel, A. C. (2007) Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature, 447 (7146). pp. 799-816. ISSN 00280836 (ISSN)

Bish, Rebecca A. (2007) A Novel Role for the Ubiquitin-Binding Zinc Finger Domain in DNA Repair. PhD thesis, Cold Spring Harbor Laboratory.

Bish, Rebecca A., Myers, Michael P. (2007) Werner helicase interacting protein 1 (WRNIP1) binds polyubiquitin via its zinc finger domain. J Biol Chem, 282 (32). pp. 23184-23193. ISSN 0021-9258 (Print)

Black, S. M., Kumar, S., Wiseman, D., Ravi, K., Wedgwood, S., Ryzhov, V., Fineman, J. R. (2007) Pediatric pulmonary hypertension: Roles of endothelin-1 and nitric oxide. Clinical Hemorheology and Microcirculation, 37 (1-2). pp. 111-120. ISSN 1386-0291

Boccara, M., Sarazin, A., Billoud, B., Jolly, V., Martienssen, R., Baulcombe, D., Colot, V. (2007) New approaches for the analysis of Arabidopsis thaliana small RNAs. Biochimie, 89 (10). pp. 1252-6. ISSN 0300-9084 (Print)

Boettner, B., Van Aelst, L. (2007) The Rap GTPase Activator Drosophila PDZ-GEF Regulates Cell Shape in Epithelial Migration and Morphogenesis. Mol Cell Biol, 27 (22). pp. 7966-7980. ISSN 0270-7306 (Print)

Bokil, H. S., Mitra, P. P. (2007) Non-parametric methods for the analysis of neurobiological time-series data. 46th IEEE Conference on Decision and Control, 2007. pp. 5833-5838.

Bokil, H. S., Purpura, K., Schoffelen, J. M., Thomson, D., Mitra, P. P. (2007) Comparing spectra and coherences for groups of unequal size. J Neurosci Methods, 159 (2). pp. 337-45. ISSN 0165-0270 (Print)

Bolduc, F. V. (2007) Role of Drosophila Fragile X mental retardation protein and the RNA interference pathway in Drosophila learning and memory. PhD thesis, Cold Spring Harbor Laboratory.

Bosco, E. E., Wang, Y., Xu, H., Zilfou, J. T., Knudsen, K. E., Aronow, B. J., Lowe, S. W., Knudsen, E. S. (2007) The retinoblastoma tumor suppressor modifies the therapeutic response of breast cancer. J Clin Invest, 117 (1). pp. 218-228. ISSN 0021-9738 (Print)

Brennecke, J., Aravin, A. A., Stark, A., Dus, M., Kellis, M., Sachidanandam, R., Hannon, G. J. (2007) Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila. Cell, 128 (6). pp. 1089-103. ISSN 0092-8674 (Print)

Brower-Toland, B., Findley, S. D., Jiang, L., Liu, L., Yin, H., Dus, M., Zhou, P., Elgin, S. C., Lin, H. (2007) Drosophila PIWI associates with chromatin and interacts directly with HP1a. Genes Dev, 21 (18). pp. 2300-11. ISSN 0890-9369 (Print)0890-9369

Buratti, E., Chivers, M., Královičová, J., Romano, M., Baralle, M., Krainer, Adrian R., Vořechovský, I. (2007) Aberrant 5' splice sites in human disease genes: mutation pattern, nucleotide structure and comparison of computational tools that predict their utilization. Nucleic Acids Res, 35 (13). pp. 4250-4263. ISSN 1362-4962 (Electronic)

Burgess, D. J. (2007) RNAi Genetic Screens for Chemotherapy Response Modifier Genes. PhD thesis, Cold Spring Harbor Laboratory.

C

Caceres, J. F., Krainer, A. R., Kornblihtt, A. R. (2007) The pathology of pre-mRNA splicing: a meeting in the Italian Alps - Workshop on pre-mRNA processing and disease. Embo Reports, 8 (8). pp. 730-734. ISSN 1469-221X

Canter, R. J., Qin, L. X., Downey, R. J., Brennan, M. F., Singer, S., Maki, R. G. (2007) Perioperative chemotherapy in patients undergoing pulmonary resection for metastatic soft-tissue sarcoma of the extremity : a retrospective analysis. Cancer, 110 (9). pp. 2050-60. ISSN 0008-543X (Print)0008-543X (Linking)

Carlton, J. M., Hirt, R. P., Silva, J. C., Delcher, A. L., Schatz, M., Zhao, Q., Wortman, J. R., Bidwell, S. L., Alsmark, U. C. M., Besteiro, S., Sicheritz-Ponten, T., Noel, C. J., Dacks, J. B., Foster, P. G., Simillion, C., Van De Peer, Y., Miranda-Saavedra, D., Barton, G. J., Westrop, G. D., Müller, S., Dessi, D., Fiori, P. L., Ren, Q., Paulsen, I., Zhang, H., Bastida-Corcuera, F. D., Simoes-Barbosa, A., Brown, M. T., Hayes, R. D., Mukherjee, M., Okumura, C. Y., Schneider, R., Smith, A. J., Vanacova, S., Villalvazo, M., Haas, B. J., Pertea, M., Feldblyum, T. V., Utterback, T. R., Shu, C. L., Osoegawa, K., De Jong, P. J., Hrdy, I., Horvathova, L., Zubacova, Z., Dolezal, P., Malik, S. B., Logsdon Jr, J. M., Henze, K., Gupta, A., Wang, C. C., Dunne, R. L., Upcroft, J. A., Upcroft, P., White, O., Salzberg, S. L., Tang, P., Chiu, C. H., Lee, Y. S., Embley, T. M., Coombs, G. H., Mottram, J. C., Tachezy, J., Fraser-Liggett, C. M., Johnson, P. J. (2007) Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Science, 315 (5809). pp. 207-212. ISSN 00368075 (ISSN)

Carmell, M. A., Girard, A., van de Kant, H. J. G., Bourc'his, D., Bestor, T. H., de Rooij, D. G., Hannon, G. J. (2007) MIWI2 Is Essential for Spermatogenesis and Repression of Transposons in the Mouse Male Germline. Developmental Cell, 12 (4). pp. 503-514.

Celikel, T., Marx, V., Freudenberg, F., Zivkovic, A., Resnik, E., Hasan, M. T., Licznerski, P., Osten, P., Rozov, A., Seeburg, P. H., Schwarz, M. K. (2007) Select overexpression of homer1a in dorsal hippocampus impairs spatial working memory. Frontiers in Neuroscience, 1 (1). pp. 97-110. ISSN 16624548

Chabes, A., Stillman, B. (2007) Constitutively high dNTP concentration inhibits cell cycle progression and the DNA damage checkpoint in yeast Saccharomyces cerevisiae. Proceedings of the National Academy of Sciences of the United States of America, 104 (4). pp. 1183-1188. ISSN 0027-8424

Chattopadhyaya, B., Di Cristo, G., Wu, C. Z., Knott, G., Kuhlman, S. J., Fu, Y., Palmiter, R. D., Huang, Z. J. (2007) GAD67-mediated GABA synthesis and signaling regulate inhibitory synaptic innervation in the visual cortex. Neuron, 54 (6). pp. 889-903. ISSN 0896-6273 (Print)

Cheloufi, Sihem, Hannon, Gregory J. (2007) Investigating the role of the argonautes during mouse embryogenesis. In: Developmental Biology.

Chen, B. L. (2007) Neuronal Network of C. elegans: from Anatomy to Behavior. PhD thesis, Cold Spring Harbor Laboratory.

Chen, Y. H., Li, H. J., Shi, D. Q., Yuan, L., Liu, J., Sreenivasan, R., Baskar, R., Grossniklaus, U., Yang, W. C. (2007) The central cell plays a critical role in pollen tube guidance in Arabidopsis. Plant Cell, 19 (11). pp. 3563-3577. ISSN 1040-4651

Cheung, W., Bluth, M. J., Khan, S., Johns, C., Lin, Y. Y., Zenilman, M. E., Bluth, M. H. (2007) Peripheral blood mononuclear cell gene array profiles in female patients with involuntary bladder contractions. International Urogynecology Journal, 18. S88-S88. ISSN 0937-3462

Chitwood, D. H., Guo, M., Nogueira, F. T. S., Timmermans, M. C. P. (2007) Establishing leaf polarity: the role of small RNAs and positional signals in the shoot apex. Development, 134 (5). pp. 813-23. ISSN 0950-1991 (Print)

Chitwood, D. H., Timmermans, M. C. P. (2007) Target mimics modulate miRNAs. Nat Genet, 39 (8). pp. 935-6. ISSN 1061-4036 (Print)

Choe, L., D'Ascenzo, M., Relkin, N. R., Pappin, D., Ross, P., Williamson, B., Guertin, S., Pribil, P., Lee, K. H. (2007) 8-plex quantitation of changes in cerebrospinal fluid protein expression in subjects undergoing intravenous immunoglobulin treatment for Alzheimer's disease. Proteomics, 7 (20). pp. 3651-60. ISSN 1615-9853 (Print)1615-9853 (Linking)

Chou, S. T., Bailey, C. L., Hardison, R. C., Blobel, G. A., Vakoc, C. R., Weiss, M. J. (2007) GATA-1 represses PU.1/Sfpi-1 gene transcription in erythroMegakaryocytic progenitors. Blood, 110 (11). 371A-371A. ISSN 0006-4971

Churchland, A. K., Huang, X., Lisberger, S. G. (2007) Responses of neurons in the medial superior temporal visual area to apparent motion stimuli in macaque monkeys. Journal of Neurophysiology, 97 (1). pp. 272-282. ISSN 00223077 (ISSN)

Churchland, A. K., Shadlen, M. N. (2007) Decision and Vision. In: The New Encyclopedia of Neuroscience. Elsevier.

Ciarrocchi, A., Jankovic, V., Shaked, Y., Nolan, D. J., Mittal, V., Kerbel, R. S., Nimer, S. D., Benezra, R. (2007) Id1 Restrains p21 Expression to Control Endothelial Progenitor Cell Formation. PLoS ONE, 2 (12). e1338. ISSN 1932-6203 (Electronic)

Clark, A. G., Eisen, M. B., Smith, D. R., Bergman, C. M., Oliver, B., Markow, T. A., Kaufman, T. C., Kellis, M., Gelbart, W., Iyer, V. N., Pollard, D. A., Sackton, T. B., Larracuente, A. M., Singh, N. D., Abad, J. P., Abt, D. N., Adryan, B., Aguade, M., Akashi, H., Anderson, W. W., Aquadro, C. F., Ardell, D. H., Arguello, R., Artieri, C. G., Barbash, D. A., Barker, D., Barsanti, P., Batterham, P., Batzoglou, S., Begun, D., Bhutkar, A., Blanco, E., Bosak, S. A., Bradley, R. K., Brand, A. D., Brent, M. R., Brooks, A. N., Brown, R. H., Butlin, R. K., Caggese, C., Calvi, B. R., Bernardo De Carvalho, A., Caspi, A., Castrezana, S., Celniker, S. E., Chang, J. L., Chapple, C., Chatterji, S., Chinwalla, A., Civetta, A., Clifton, S. W., Comeron, J. M., Costello, J. C., Coyne, J. A., Daub, J., David, R. G., Delcher, A. L., Delehaunty, K., Do, C. B., Ebling, H., Edwards, K., Eickbush, T., Evans, J. D., Filipski, A., Findeiß, S., Freyhult, E., Fulton, L., Fulton, R., Garcia, A. C. L., Gardiner, A., Garfield, D. A., Garvin, B. E., Gibson, G., Gilbert, D., Gnerre, S., Godfrey, J., Good, R., Gotea, V., Gravely, B., Greenberg, A. J., Griffiths-Jones, S., Gross, S., Guigo, R., Gustafson, E. A., Haerty, W., Hahn, M. W., Halligan, D. L., Halpern, A. L., Halter, G. M., Han, M. V., Heger, A., Hillier, L., Hinrichs, A. S., Holmes, I., Hoskins, R. A., Hubisz, M. J., Hultmark, D., Huntley, M. A., Jaffe, D. B., Jagadeeshan, S. (2007) Evolution of genes and genomes on the Drosophila phylogeny. Nature, 450 (7167). pp. 203-218. ISSN 00280836 (ISSN)

Cokol, M., Iossifov, I., Rodriguez-Esteban, R., Rzhetsky, A. (2007) How many scientific papers should be retracted? EMBO Rep, 8 (5). pp. 422-3. ISSN 1469-221X (Print)1469-221X (Linking)

D

Das, D., Zhang, M. Q., Korenberg, M. J. (2007) Predictive models in gene regulation. In: Methods in Molecular Biology. Humana Press, Totowa, NJ, pp. 95-110.

Das, R., Yu, J., Zhang, Z., Gygi, M. P., Krainer, A. R., Gygi, S. P., Reed, R. (2007) SR proteins function in coupling RNAP II transcription to pre-mRNA splicing. Molecular Cell, 26 (6). pp. 867-881. ISSN 1097-2765

Day, K., Shefer, G., Richardson, J. B., Enikolopov, G. N., Yablonka-Reuveni, Z. (2007) Nestin-GFP reporter expression defines the quiescent state of skeletal muscle satellite cells. Developmental Biology, 304 (1). pp. 246-259. ISSN 0012-1606

DeCoteau, W. E., Thorn, C., Gibson, D. J., Courtemanche, R., Mitra, P. P., Kubota, Y., Graybiel, A. M. (2007) Oscillations of local field potentials in the rat dorsal striatum during spontaneous and instructed behaviors. Journal of Neurophysiology, 97 (5). pp. 3800-3805. ISSN 0022-3077

DeMatteo, R. P., Maki, R. G., Singer, S., Gonen, M., Brennan, M. F., Antonescu, C. R. (2007) Results of tyrosine kinase inhibitor therapy followed by surgical resection for metastatic gastrointestinal stromal tumor. Ann Surg, 245 (3). pp. 347-52. ISSN 0003-4932 (Print)0003-4932 (Linking)

DeWeese, M. R. (2007) Whole-cell recording in vivo. Curr Protoc Neurosci (chap 6). Unit 6.22. ISSN 1934-8576 (Electronic)

Decoteau, W. E., Thorn, C., Gibson, D. J., Courtemanche, R., Mitra, P. P., Kubota, Y., Graybiel, A. M. (2007) Learning-related coordination of striatal and hippocampal theta rhythms during acquisition of a procedural maze task. Proc Natl Acad Sci U S A, 104 (13). pp. 5644-9. ISSN 0027-8424 (Print)

Demas, J., Cline, H. T. (2007) The blu Blur: mutation of a vesicular glutamate transporter reduces the resolution of zebrafish vision. Neuron, 53 (1). pp. 4-6. ISSN 0896-6273 (Print)

Denissov, S., Van Driel, M., Voit, R., Hekkelman, M., Hulsen, T., Hernandez, N., Grummt, I., Wehrens, R., Stunnenberg, H. (2007) Identification of novel functional TBP-binding sites and general factor repertoires. Embo Journal, 26 (4). pp. 944-954. ISSN 0261-4189

Denoeud, F., Kapranov, P., Ucla, C., Frankish, A., Castelo, R., Drenkow, J., Lagarde, J., Alioto, T., Manzano, C., Chrast, J., Dike, S., Wyss, C., Henrichsen, C. N., Holroyd, N., Dickson, M. C., Taylor, R., Hance, Z., Foissac, S., Myers, R. M., Rogers, J., Hubbard, T., Harrow, J., Guigó, R., Gingeras, T. R., Antonarakis, S. E., Reymond, A. (2007) Prominent use of distal 5′ transcription start sites and discovery of a large number of additional exons in ENCODE regions. Genome Research, 17 (6). pp. 746-759. ISSN 10889051 (ISSN)

Desjardins, C. A., Gundersen-Rindal, D. E., Hostetler, J. B., Tallon, L. J., Fuester, R. W., Schatz, M. C., Pedroni, M. J., Fadrosh, D. W., Haas, B. J., Toms, B. S., Chen, D., Nene, V. (2007) Structure and evolution of a proviral locus of Glyptapanteles indiensis bracovirus. BMC Microbiology, 7. ISSN 14712180 (ISSN)

Di Cristo, C., Fiore, G., Scheinker, V., Enikolopov, G. N., d'Ischia, M., Palumbo, A., Di Cosmo, A. (2007) Nitric oxide synthase expression in the central nervous system of Sepia officinalis: an in situ hybridization study. European Journal of Neuroscience, 26 (6). pp. 1599-1610. ISSN 0953-816X

Di Cristo, G., Chattopadhyaya, B., Kuhlman, S. J., Fu, Y., Belanger, M-C., Wu, C. Z., Rutishauser, U., Maffei, L., Huang, Z. J. (2007) Activity-dependent PSA expression regulates inhibitory maturation and onset of critical period plasticity. Nat Neurosci, 10 (12). pp. 1569-1577.

Dickins, R. A., McJunkin, K., Hernando, E., Premsrirut, P. K., Krizhanovsky, V., Burgess, D. J., Kim, S. Y., Cordon-Cardo, C., Zender, L., Hannon, G. J., Lowe, S. W. (2007) Tissue-specific and reversible RNA interference in transgenic mice. Nat Genet, 39 (7). 914 - 921. ISSN 1061-4036 (Print)

Dilmanian, F. A., Qu, Y., Feinendegen, L. E., Pena, L. A., Bacarian, T., Henn, F. A., Kalef-Ezra, J., Liu, S., Zhong, Z., McDonald, J. W. (2007) Tissue-sparing effect of x-ray microplanar beams particularly in the CNS: is a bystander effect involved? Experimental Hematology, 35 (4 Supp). pp. 69-77. ISSN 0301472X

Draviam, V. M., Stegmeier, F., Nalepa, G., Sowa, M. E., Chen, J., Liang, A., Hannon, G. J., Sorger, P. K., Harper, J. W., Elledge, S. J. (2007) A functional genomic screen identifies a role for TAO1 kinase in spindle-checkpoint signalling. Nature Cell Biology, 9 (5). pp. 556-564. ISSN 1465-7392

Duelli, D., Lazebnik, Y. (2007) Cell-to-cell fusion as a link between viruses and cancer. Nat Rev Cancer, 7 (12). pp. 968-76. ISSN 1474-1768 (Electronic)

Duelli, D. M., Padilla-Nash, H. M., Berman, D., Murphy, K. M., Ried, T., Lazebnik, Y. (2007) A virus causes cancer by inducing massive chromosomal instability through cell fusion. Current Biology, 17 (5). pp. 431-7. ISSN 0960-9822 (Print)

Dumitriu, D., Cossart, R., Huang, Z. J., Yuste, R. (2007) Correlation between axonal morphologies and synaptic input kinetics of interneurons from mouse visual cortex. Cerebral Cortex, 17 (1). pp. 81-91. ISSN 1047-3211

Dura, J. M., Preat, T., Tully, T. (2007) Identification of linotte, a new gene affecting learning and memory in Drosophila melanogaster. Journal of Neurogenetics, 21 (4). pp. 307-320. ISSN 0167-7063

de la Bastide, M., McCombie, W. R. (2007) Assembling genomic DNA sequences with PHRAP. Current Protocols in Bioinformatics (Unit 1). ISSN 1934-340X (Electronic)1934-3396 (Linking)

E

Egan, C. M., Sridhar, S., Wigler, M. H., Hall, I. M. (2007) Recurrent DNA copy number variation in the laboratory mouse. Nat Genet, 39 (11). pp. 1384-9. ISSN 1061-4036 (Print)

Egeblad, M., Shen, H. C. J., Behonick, D. J., Wilmes, L., Eichten, A., Korets, L. V., Kheradmand, F., Werb, Z., Coussens, L. M. (2007) Type I collagen is a genetic modifier of matrix metalloproteinase 2 in murine skeletal development. Developmental Dynamics, 236 (6). pp. 1683-1693. ISSN 10588388 (ISSN)

Ehrlich, I., Klein, M. E., Rumpel, S., Malinow, R. (2007) PSD-95 is required for activity-driven synapse stabilization. Proc Natl Acad Sci U S A, 104 (10). pp. 4176-81. ISSN 0027-8424 (Print)

Eichler, E. E., Nickerson, D. A., Altshuler, D., Bowcock, A. M., Brooks, L. D., Carter, N. P., Church, D. M., Felsenfeld, A., Guyer, M., Lee, C., Lupski, J. R., Mullikin, J. C., Pritchard, J. K., Sebat, J., Sherry, S. T., Smith, D., Valle, D., Waterston, R. H. (2007) Completing the map of human genetic variation. Nature, 447 (7141). pp. 161-165. ISSN 0028-0836

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Yang, Z., Jiang, H., Zhao, F., Shankar, D. B., Sakamoto, K. M., Zhang, M. Q., Lin, S. (2007) A highly conserved regulatory element controls hematopoietic expression of GATA-2 in zebrafish. Bmc Developmental Biology, 7. ISSN 1471-213X

Yuan, C. C., Zhao, X., Florens, L., Swanson, S. K., Washburn, M. P., Hernandez, N. (2007) CHD8 associates with human Staf and contributes to efficient U6 RNA polymerase III transcription. Mol Cell Biol, 27 (24). pp. 8729-8738. ISSN 0270-7306 (Print)

Yuneva, M., Zamboni, N., Oefner, P., Sachidanandam, R., Lazebnik, Y. (2007) Deficiency in glutamine but not glucose induces MYC-dependent apoptosis in human cells. J Cell Biol, 178 (1). pp. 93-105. ISSN 0021-9525 (Print)

Z

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Zender, L., Kubicka, S. (2007) Suppression of apoptosis in the liver by systemic and local delivery of small-interfering RNAs. Methods Mol Biol, 361. pp. 217-26. ISSN 1-59745-208-4

Zender, L., Zuber, J., Lowe, S. W. (2007) SnapShot: Genetic mouse models of cancer. Cell, 129 (4). p. 838. ISSN 0092-8674

Zhang, C., Krainer, A. R., Zhang, M. Q. (2007) Evolutionary impact of limited splicing fidelity in mammalian genes. Trends Genet, 23 (10). pp. 484-488. ISSN 0168-9525 (Print)

Zhang, C., Zhang, X., Zhang, M. Q., Li, Y. (2007) Neighbor number, valley seeking and clustering. Pattern Recognition Letters, 28 (2). pp. 173-180. ISSN 0167-8655

Zhang, C. L., Hastings, M. L., Krainer, A. R., Zhang, M. Q. (2007) Dual-specificity splice sites function alternatively as 5 ' and 3 ' splice sites. Proceedings of the National Academy of Sciences of the United States of America, 104 (38). pp. 15028-15033. ISSN 0027-8424

Zhang, J., Jiang, B., Li, M., Tromp, J., Zhang, X. G., Zhang, M. Q. (2007) Computing exact P-values for DNA motifs. Bioinformatics, 23 (5). pp. 531-537. ISSN 1367-4803

Zhang, M. Q. (2007) Computational analyses of eukaryotic promoters. Bmc Bioinformatics, 8 Supp (6). S3. ISSN 1471-2105 (Electronic)

Zhang, X., Madi, S., Borsuk, L., Nettleton, D., Elshire, R. J., Buckner, B., Janick-Buckner, D., Beck, J., Timmermans, M. C. P., Schnable, P. S., Scanlon, M. J. (2007) Laser microdissection of narrow sheath mutant maize uncovers novel gene expression in the shoot apical meristem. Plos Genetics, 3 (6). pp. 1040-1052. ISSN 1553-7390

Zhang, Z., Krainer, A. R. (2007) Splicing remodels messenger ribonucleoprotein architecture via eIF4A3-dependent and -independent recruitment of exon junction complex components. Proc Natl Acad Sci U S A, 104 (28). pp. 11574-9. ISSN 0027-8424 (Print)

Zhao, T., Li, G. L., Mi, S. J., Li, S., Hannon, G. J., Wang, X. J., Qi, Y. J. (2007) A complex system of small RNAs in the unicellular green alga Chlamydomonas reinhardtii. Genes Dev, 21 (10). pp. 1190-1203. ISSN 0890-9369

Zhao, X., Leotta, A., Kustanovich, V., Lajonchere, C., Geschwind, D. H., Law, K., Law, P., Qiu, S., Lord, C., Sebat, J., Ye, K., Wigler, M. H. (2007) A unified genetic theory for sporadic and inherited autism. Proc Natl Acad Sci U S A, 104 (31). pp. 12831-12836. ISSN 0027-8424 (Print)

Zhao, Xi., Xuan, Z. Y., Zhang, M. Q. (2007) Boosting with stumps for predicting transcription start sites. Genome Biol, 8 (2). R17. ISSN 1465-6914 (Electronic)

Zheng, D., Frankish, A., Baertsch, R., Kapranov, P., Reymond, A., Siew, W. C., Lu, Y., Denoeud, F., Antonarakis, S. E., Snyder, M., Ruan, Y., Wei, C. L., Gingeras, T. R., Guigó, R., Harrow, J., Gerstein, M. B. (2007) Pseudogenes in the ENCODE regions: Consensus annotation, analysis of transcription, and evolution. Genome Research, 17 (6). pp. 839-851. ISSN 10889051 (ISSN)

Zhu, P., Aller, M. I., Baron, U., Cambridge, S., Bausen, M., Herb, J., Sawinski, J., Cetin, A., Osten, P., Nelson, M. L., Kugler, S., Seeburg, P. H., Sprengel, R., Hasan, M. T. (2007) Silencing and un-silencing of tetracycline-controlled genes in neurons. PLoS ONE, 2 (6). e533. ISSN 1932-6203 (Electronic)

Zink, M., Vollmayr, B., Gebicke-Haerter, P. J., Henn, F. A., Thome, J. (2007) Reduced expression of complexins I and II in rats bred for learned helplessness. Brain Res, 1144. pp. 202-8. ISSN 0006-8993 (Print)0006-8993 (Linking)

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