Items where Subject is "breast cancer"

Group by: Authors | Item Type
Number of items at this level: 234.

Paper

Aganezov, S., Goodwin, S., Sherman, R. M., Sedlazeck, F. J., Arun, G., Bhatia, S., Lee, I., Kirsche, M., Wappel, R., Kramer, M., Kostroff, K., Spector, D. L., Timp, W., McCombie, W. R., Schatz, M. C. (September 2020) Comprehensive analysis of structural variants in breast cancer genomes using single-molecule sequencing. Genome Res, 30 (9). pp. 1258-1273. ISSN 1088-9051 (Print)1088-9051

Aggarwal, Disha, Russo, Suzanne, Naik, Payal, Bhatia, Sonam, Spector, David L (February 2023) Establishment and Culture of Patient-Derived Breast Organoids. Journal of Visualized Experiments (192). ISSN 1940-087X

Akman, H. B., Selcuklu, S. D., Donoghue, M. T., Akhavantabasi, S., Sapmaz, A., Spillane, C., Yakicier, M. C., Erson-Bensan, A. E. (May 2015) ALCAM is indirectly modulated by miR-125b in MCF7 cells. Tumour Biol, 36 (5). pp. 3511-20. ISSN 1423-0380 (Electronic)1010-4283 (Linking)

Alimonti, A., Carracedo, A., Clohessy, J. G., Trotman, L. C., Nardella, C., Egia, A., Salmena, L., Sampieri, K., Haveman, W. J., Brogi, E., Richardson, A. L., Zhang, J., Pandolfi, P. P. (May 2010) Subtle variations in Pten dose determine cancer susceptibility. Nature Genetics, 42 (5). pp. 454-458. ISSN 10614036 (ISSN) (In Press)

Almeida, Ana S, Fein, Miriam R, Egeblad, Mikala (June 2021) Multi-color Flow Cytometry for Comprehensive Analysis of the Tumor Immune Infiltrate in a Murine Model of Breast Cancer. Bio-protocol, 11 (11). e4012. ISSN 2331-8325

Anczukow, O., Akerman, M., Clery, A., Wu, J., Shen, C., Shirole, N. H., Raimer, A., Sun, S., Jensen, M. A., Hua, Y., Allain, F. H., Krainer, A. R. (October 2015) SRSF1-Regulated Alternative Splicing in Breast Cancer. Mol Cell, 60 (1). pp. 105-17. ISSN 1097-4164 (Electronic)1097-2765 (Linking)

Ando, S., Sarlis, N. J., Krishnan, J., Feng, X., Refetoff, S., Zhang, M. Q., Oldfield, E. H., Yen, P. M. (September 2001) Aberrant alternative splicing of thyroid hormone receptor in a TSH-secreting pituitary tumor is a mechanism for hormone resistance. Molecular Endocrinology, 15 (9). pp. 1529-1538. ISSN 0888-8809

Arias-Romero, L. E., Villamar-Cruz, O., Pacheco, A., Kosoff, R., Huang, M., Muthuswamy, S. K., Chernoff, J. (October 2010) A Rac-Pak signaling pathway is essential for ErbB2-mediated transformation of human breast epithelial cancer cells. Oncogene, 29 (43). pp. 5839-49. ISSN 0950-9232

Ariazi, E. A., Taylor, J. C., Black, M. A., Nicolas, E., Slifker, M. J., Azzam, D. J., Boyd, J. (2017) A new role for ERα: Silencing via DNA methylation of basal, stem cell, and EMT genes. Molecular Cancer Research, 15 (2). pp. 152-164. ISSN 1541-7786

Arun, G., Diermeier, S., Akerman, M., Chang, K. C., Wilkinson, J. E., Hearn, S., Kim, Y., MacLeod, A. R., Krainer, A. R., Norton, L., Brogi, E., Egeblad, M., Spector, D. L. (March 2016) Differentiation of mammary tumors and reduction in metastasis upon Malat1 LncRNA loss. Cancer Research, 76 (Supple). ISSN 0008-5472

Arun, G., Diermeier, S., Akerman, M., Chang, K. C., Wilkinson, J. E., Hearn, S., Kim, Y., MacLeod, A. R., Krainer, A. R., Norton, L., Brogi, E., Egeblad, M., Spector, D. L. (January 2016) Differentiation of mammary tumors and reduction in metastasis upon Malat1 lncRNA loss. Genes Dev, 30 (1). pp. 34-51. ISSN 1549-5477 (Electronic)0890-9369 (Linking) (Public Dataset)

Arun, G., Spector, D. L. (March 2019) MALAT1 Long Non-Coding RNA and Breast Cancer. RNA Biol, 16 (6). pp. 860-863. ISSN 1547-6286

Balbín, M., Hannon, G. J., Pendás, A. M., Ferrando, A. A., Vizoso, F., Fueyo, A., López-Otín, C. (1996) Functional analysis of a p21(WAF1,CIP1,SDI1) mutant (Arg 94 → Trp) identified in a human breast carcinoma. Evidence that the mutation impairs the ability of p21 to inhibit cyclin-dependent kinases. Journal of Biological Chemistry, 271 (26). pp. 15782-15786. ISSN 00219258 (ISSN)

Barth, Nicole, Mendive-Tapia, Lorena, Subiros-Funosas, Ramon, Ghashghaie, Ouldouz, Lavilla, Rodolfo, Maiorino, Laura, He, Xue-Yan, Dransfield, Ian, Egeblad, Mikala, Vendrell, Marc (November 2021) A Bivalent Activatable Fluorescent Probe for Screening and Intravital Imaging of Chemotherapy-induced Cancer Cell Death. Angewandte Chemie International Edition. ISSN 1433-7851

Baslan, T., Kendall, J., Volyanskyy, K., McNamara, K., Cox, H., D'Italia, S., Ambrosio, F., Riggs, M., Rodgers, L., Leotta, A., Song, J., Mao, Y., Wu, J., Shah, R., Gularte-Merida, R., Chadalavada, K., Nanjangud, G., Varadan, V., Gordon, A., Curtis, C., Krasnitz, A., Dimitrova, N., Harris, L., Wigler, M., Hicks, J. (May 2020) Novel Insights Into Breast Cancer Copy Number Genetic Heterogeneity Revealed by Single-Cell Genome Sequencing. Elife, 9. e51480. ISSN 2050-084X

Bazarov, A. V., Jae Lee, W., Bazarov, I., Bosire, M., Hines, W. C., Stankovich, B., Chicas, A., Lowe, S. W., Yaswen, P. (March 2012) The specific role of pRb in p16(INK4A)-mediated arrest of normal and malignant human breast cell. Cell Cycle, 11 (5). ISSN 1551-4005 (Electronic)1551-4005 (Linking)

Bazarov, A. V., van Sluis, M., Hines, W. C., Bassett, E., Beliveau, A., Campeau, E., Mukhopadhyay, R., Lee, W. J., Melodyev, S., Zaslavsky, Y., Lee, L., Rodier, F., Chicas, A., Lowe, S. W., Benhattar, J., Ren, B., Campisi, J., Yaswen, P. (October 2010) p16(INK4a)-mediated suppression of telomerase in normal and malignant human breast cells. Aging Cell, 9 (5). pp. 736-746. ISSN 1474-9718

Benezra, R., Henke, E., Ciarrocchi, A., Ruzinova, M., Solit, D., Rosen, N., Nolan, Daniel, Mittal, V., De Candia, P. (2005) Induction of complete regressions of oncogene-induced breast tumors in mice. Cold Spring Harbor Symposia on Quantitative Biology, 70 (1). pp. 375-381. ISSN 00917451 (ISSN)

Bhatia, Sonam, Kramer, Melissa, Russo, Suzanne, Naik, Payal, Arun, Gayatri, Brophy, Kyle, Andrews, Peter, Fan, Cheng, Perou, Charles M, Preall, Jonathan, Ha, Taehoon, Plenker, Dennis, Tuveson, David A, Rishi, Arvind, Wilkinson, John E, McCombie, W Richard, Kostroff, Karen, Spector, David L (February 2022) Patient-derived triple-negative breast cancer organoids provide robust model systems that recapitulate tumor-intrinsic characteristics. Cancer Research. ISSN 0008-5472

Bhatia, Sonam, Kramer, Melissa, Russo, Suzanne, Naik, Payal, Arun, Gayatri, Brophy, Kyle, Andrews, Peter A, Fan, Cheng, Perou, Charles M, Preall, Jonathan, Ha, Taehoon, Rishi, Arvind, Wilkinson, John Erby, McCombie, William Richard, Kostroff, Karen, Spector, David L (August 2021) Patient-derived triple negative breast cancer organoids provide robust model systems that recapitulate tumor intrinsic characteristics. BioRxiv.

Biffi, G., Tuveson, D. A. (November 2018) Deciphering cancer fibroblasts. J Exp Med. ISSN 0022-1007

Boivin, B., Chaudhary, F., Dickinson, B. C., Haque, A., Pero, S. C., Chang, C. J., Tonks, N. K. (November 2013) Receptor protein-tyrosine phosphatase α regulates focal adhesion kinase phosphorylation and ErbB2 oncoprotein mediated mammary epithelial cell motility. Journal of Biological Chemistry, 288 (52). pp. 36926-36935. ISSN 00219258 (ISSN)

Borniger, J. C. (2019) Central regulation of breast cancer growth and metastasis. J Cancer Metastasis Treat, 5. ISSN 2394-4722

Borniger, J. C., Walker Ii, W. H., Surbhi, Emmer, K. M., Zhang, N., Zalenski, A. A., Muscarella, S. L., Fitzgerald, J. A., Smith, A. N., Braam, C. J., TinKai, T., Magalang, U. J., Lustberg, M. B., Nelson, R. J., DeVries, A. C. (July 2018) A Role for Hypocretin/Orexin in Metabolic and Sleep Abnormalities in a Mouse Model of Non-metastatic Breast Cancer. Cell Metab, 28 (1). 118-129 e5. ISSN 1932-7420 (Electronic)1550-4131 (Linking)

Bosco, E. E., Wang, Y., Xu, H., Zilfou, J. T., Knudsen, K. E., Aronow, B. J., Lowe, S. W., Knudsen, E. S. (January 2007) The retinoblastoma tumor suppressor modifies the therapeutic response of breast cancer. J Clin Invest, 117 (1). pp. 218-228. ISSN 0021-9738 (Print)

Boyd, J. (2018) A parallel model for breast cancer metastasis. Breast cancer research and treatment, 170 (2). pp. 443-444. ISSN 0167-6806

Boyer, Jacob A, Sharma, Malvika, Dorso, Madeline, Mai, Nicholas, Amor, Corina, Reiter, Jason M, Kannan, Ram, Gadal, Sunyana, Xu, Jianing, Miele, Matthew, Zhuoning, Li, Chen, Xiaoping, Chang, Qing, Pareja, Fresia, Worland, Stephan, Warner, Douglas, Sperry, Sam, Chiang, Gary G, Thompson, Peggy A, Yang, Guangli, Ouerfelli, Ouathek, De Stanchina, Elisa, Wendel, Hans G, Rosen, Ezra Y, Chandarlapaty, Sarat, Rosen, Neal (May 2024) eIF4A controls translation of estrogen receptor alpha and is a therapeutic target in advanced breast cancer. bioRxiv. (Submitted)

Bradley, R, Braybrooke, J, Gray, R, Hills, R, Liu, Z, Peto, R, Davies, L, Dodwell, D, McGale, P, Pan, H, Taylor, C, Anderson, S, Gelber, R, Gianni, L, Jacot, W, Joensuu, H, Moreno-Aspitia, A, Piccart, M, Press, M, Romond, E, Slamon, D, Suman, V, Berry, R, Boddington, C, Clarke, M, Davies, C, Duane, F, Evans, V, Gay, J, Gettins, L, Godwin, J, James, S, Liu, H, MacKinnon, E, Mannu, G, McHugh, T, Morris, P, Read, S, Straiton, E, Wang, Y, Crown, J, de Azambuja, E, Delaloge, S, Fung, H, Geyer, C, Spielmann, M, Valagussa, P, Albain, K, Arriagada, R, Bartlett, J, Bergsten-Nordström, E, Bliss, J, Brain, E, Carey, L, Coleman, R, Cuzick, J, Davidson, N, Del Mastro, L, Di Leo, A, Dignam, J, Dowsett, M, Ejlertsen, B, Francis, P, Gnant, M, Goetz, M, Goodwin, P, Halpin-Murphy, P, Hayes, D, Hill, C, Jagsi, R, Janni, W, Loibl, S, Mamounas, EP, Martín, M, Mukai, H, Nekljudova, V, Norton, L, Ohashi, Y, Pierce, L, Poortmans, P, Raina, V, Rea, D, Regan, M, Robertson, J, Rutgers, E, Spanic, T, Sparano, J, Steger, G, Tang, G, Toi, M, Tutt, A, Viale, G, Wang, X, Whelan, T, Wilcken, N, Wolmark, N, Cameron, D, Bergh, J, Pritchard, KI, Swain, SM (August 2021) Trastuzumab for early-stage, HER2-positive breast cancer: a meta-analysis of 13 864 women in seven randomised trials. The Lancet Oncology, 22 (8). pp. 1139-1150. ISSN 1470-2045

Bradley, Sherille D, Talukder, Amjad H, Lai, Ivy, Davis, Rebecca, Alvarez, Hector, Tiriac, Herve, Zhang, Minying, Chiu, Yulun, Melendez, Brenda, Jackson, Kyle R, Katailiha, Arjun, Sonnemann, Heather M, Li, Fenge, Kang, Yaan, Qiao, Na, Pan, Bih-Fang, Lorenzi, Philip L, Hurd, Mark, Mittendorf, Elizabeth A, Peterson, Christine B, Javle, Milind, Bristow, Christopher, Kim, Michael, Tuveson, David A, Hawke, David, Kopetz, Scott, Wolff, Robert A, Hwu, Patrick, Maitra, Anirban, Roszik, Jason, Yee, Cassian, Lizée, Gregory (October 2020) Vestigial-like 1 is a shared targetable cancer-placenta antigen expressed by pancreatic and basal-like breast cancers. Nature Communications, 11 (1). p. 5332. ISSN 2041-1723

Caballero, Carmela, Irrthum, Alexandre, Goulioti, Theodora, Cameron, David, Norton, Larry, Piccart, Martine (May 2023) International research to address the challenges of metastatic breast cancer: the AURORA Program (BIG 14-01). npj Breast Cancer, 9 (1). p. 42. ISSN 2374-4677

Cabodi, S., Tinnirello, A., Bisaro, B., Tornillo, G., Camacho-Leal, M. D., Forni, G., Cojoca, R., Iezzi, M., Amici, A., Montani, M., Eva, A., Di Stefano, P., Muthuswamy, S. K., Tarone, G., Turco, E., Defilippi, P. (October 2010) p130Cas is an essential transducer element in ErbB2 transformation. Faseb J, 24 (10). pp. 3796-3808. ISSN 1530-6860 (Electronic) 0892-6638 (Linking)

Callaway, Mackenzie K, Dos Santos, Camila O (July 2023) Gestational Breast Cancer - a Review of Outcomes, Pathophysiology, and Model Systems. Journal of Mammary Gland Biology and Neoplasia, 28 (1). p. 16. ISSN 1083-3021

Cardoso, F, Paluch-Shimon, S, Senkus, E, Curigliano, G, Aapro, MS, André, F, Barrios, CH, Bergh, J, Bhattacharyya, GS, Biganzoli, L, Boyle, F, Cardoso, M-J, Carey, LA, Cortés, J, El Saghir, NS, Elzayat, M, Eniu, A, Fallowfield, L, Francis, PA, Gelmon, K, Gligorov, J, Haidinger, R, Harbeck, N, Hu, X, Kaufman, B, Kaur, R, Kiely, BE, Kim, S-B, Lin, NU, Mertz, SA, Neciosup, S, Offersen, BV, Ohno, S, Pagani, O, Prat, A, Penault-Llorca, F, Rugo, HS, Sledge, GW, Thomssen, C, Vorobiof, DA, Wiseman, T, Xu, B, Norton, L, Costa, A, Winer, EP (December 2020) 5th ESO-ESMO international consensus guidelines for advanced breast cancer (ABC 5). Annals of Oncology, 31 (12). pp. 1623-1649. ISSN 0923-7534

Chan, P. M., Nestler, H. P., Miller, W. T. (November 2000) Investigating the substrate specificity of the HER2/Neu tyrosine kinase using peptide libraries. Cancer Letters, 160 (2). pp. 159-169. ISSN 0304-3835

Chang, K. C., Diermeier, S. D., Yu, A. T., Brine, L. D., Russo, S., Bhatia, S., Alsudani, H., Kostroff, K., Bhuiya, T., Brogi, E., Bennett, C. F., Rigo, F., Spector, D. L. (February 2020) MaTAR25 LncRNA Regulates the Tensin1 Gene to Impact Breast Cancer Progression. BioRxiv. (Unpublished)

Chang, K. C., Diermeier, S. D., Yu, A. T., Brine, L. D., Russo, S., Bhatia, S., Alsudani, H., Kostroff, K., Bhuiya, T., Brogi, E., Pappin, D. J., Bennett, C. F., Rigo, F., Spector, D. L. (December 2020) MaTAR25 lncRNA regulates the Tensin1 gene to impact breast cancer progression. Nat Commun, 11 (1). p. 6438. ISSN 2041-1723

Chang, KC, Spector, DL (January 2021) MaTAR25: a long non-coding RNA involved in breast cancer progression. Molecular and Cellular Oncology, 8 (2). p. 1882286. ISSN 2372-3556

Chatterjee, S., Seifried, L., Feigin, M. E., Gibbons, D. L., Scuoppo, C., Lin, W., Rizvi, Z. H., Lind, E., Dissanayake, D., Kurie, J., Ohashi, P., Muthuswamy, S. K. (April 2012) Dysregulation of Cell Polarity Proteins Synergize with Oncogenes or the Microenvironment to Induce Invasive Behavior in Epithelial Cells. PLoS ONE, 7 (4). ISSN 1932-6203

Chaudhary, F., Lucito, R., Tonks, N. K. (October 2014) Missing-in-Metastasis regulates cell motility and invasion via PTPdelta-mediated changes in SRC activity. Biochemical Journal, 465 (1). pp. 89-101. ISSN 0264-6021

Ciccone, M. F., Trousdell, M. C., Dos Santos, C. O. (November 2020) Characterization of Organoid Cultures to Study the Effects of Pregnancy Hormones on the Epigenome and Transcriptional Output of Mammary Epithelial Cells. J Mammary Gland Biol Neoplasia, 25 (4). pp. 351-366. ISSN 1083-3021

Cifani, Paolo, Kirik, Ufuk, Waldemarson, Sofia, James, Peter (July 2015) Molecular Portrait of Breast-Cancer-Derived Cell Lines Reveals Poor Similarity with Tumors. Journal of Proteome Research, 14 (7). pp. 2819-2827. ISSN 1535-3893

Comen, Elizabeth, Budhu, Sadna, Elhanati, Yuval, Page, David, Rasalan-Ho, Teresa, Ritter, Erika, Wong, Phillip, Plitas, George, Patil, Sujata, Brogi, Edi, Jochelson, Maxine, Bryce, Yolanda, Solomon, Stephen B, Norton, Larry, Merghoub, Taha, McArthur, Heather L (February 2024) Preoperative immune checkpoint inhibition and cryoablation in early-stage breast cancer. iScience, 27 (2). p. 108880. ISSN 2589-0042

Cowell, Catherine F., Weigelt, Britta, Sakr, Rita A., Ng, Charlotte K. Y., Hicks, James, King, Tari A., Reis-Filho, Jorge S. (July 2013) Progression from ductal carcinoma in situ to invasive breast cancer: Revisited. Molecular Oncology. ISSN 1574-7891

Crow, M., Lim, N., Ballouz, S., Pavlidis, P., Gillis, J. (March 2019) Predictability of human differential gene expression. Proc Natl Acad Sci U S A. ISSN 0027-8424

Daye, Dania, Panagides, John, Norton, Larry, Ahmed, Muneeb, Fukuma, Eisuke, Ward, Robert C, Gomez, Daniel, Kokabi, Nima, Vogl, Thomas, Abi-Jaoudeh, Nadine, Deipolyi, Amy (July 2023) New Frontiers in the Role of Locoregional Therapies in Breast Cancer: Proceedings from the Society of Interventional Radiology Foundation Research Consensus Panel. Journal of Vascular and Interventional Radiology. S1051-0443(23)00497. ISSN 1051-0443

Delgado, Ana Paula, Nemajerova, Alice, Rao, Manisha, Li, Jinyu, Marchenko, Natalia, Preall, Jonathan, Moll, Ute, Egeblad, Mikala, Powers, Scott (2022) Single-cell genomic analysis of triple-negative breast cancer fibroblasts uncovers evolutionarily conserved features and potential therapeutic targets. bioRxiv. (Submitted)

Deng, L., Shang, L., Bai, S., Chen, J., He, X., Trevino, R. M., Chen, S., Li, X., Meng, X., Yu, B., Wang, X., Liu, Y., McDermott, S. P., Ariazi, A. E., Ginestier, C., Ibarra, I., Ke, J., Luther, T. K., Clouthier, S. G., Xu, L., Shan, G., Song, E., Yao, H., Hannon, G. J., Weiss, S. J., Wicha, M. S., Liu, S. (September 2014) microRNA100 inhibits self-renewal of breast cancer stem-like cells and breast tumor development. Cancer Res, 74 (22). pp. 6648-6660. ISSN 0008-5472

Diermeier, S. D., Chang, K. C., Freier, S. M., Rigo, F., Bennett, C. F., Spector, D. L. (March 2016) Long noncoding RNAs as targets of mammary tumor cell proliferation and migration. Cancer Research, 76. ISSN 0008-5472

Diermeier, S. D., Spector, D. L. (August 2017) Antisense Oligonucleotide-mediated Knockdown in Mammary Tumor Organoids. Bio Protoc, 7 (16). ISSN 2331-8325 (Print)2331-8325

Diermeier, Sarah D, Chang, Kung-Chi, Freier, Susan M, Song, Junyan, El Demerdash, Osama, Krasnitz, Alexander, Rigo, Frank, Bennett, C.  Frank, Spector, David L (September 2016) Mammary Tumor-Associated RNAs Impact Tumor Cell Proliferation, Invasion, and Migration. Cell Reports, 17 (1). pp. 261-274. ISSN 2211-1247 (Public Dataset)

Docquier, A., Harmand, P. O., Fritsch, S., Chanrion, M., Darbon, J. M., Cavailles, V. (June 2010) The transcriptional coregulator RIP140 represses E2F1 activity and discriminates breast cancer subtypes. Clinical Cancer Research, 16 (11). pp. 2959-2970.

Early Breast Cancer Trialists' Collaborative Group (EBCTCG) (February 2022) Aromatase inhibitors versus tamoxifen in premenopausal women with oestrogen receptor-positive early-stage breast cancer treated with ovarian suppression: a patient-level meta-analysis of 7030 women from four randomised trials. The Lancet Oncology. ISSN 1470-2045

Early Breast Cancer Trialists’ Collaborative Group (EBCTCG). Ele, Early Breast Cancer Trialists’ Collaborative Group (EBCTCG) (April 2023) Anthracycline-containing and taxane-containing chemotherapy for early-stage operable breast cancer: a patient-level meta-analysis of 100 000 women from 86 randomised trials. The Lancet, 401 (10384). pp. 1277-1292. ISSN 0140-6736

Ebbesen, S. H., Scaltriti, M., Bialucha, C. U., Morse, N., Kastenhuber, E. R., Wen, H. Y., Dow, L. E., Baselga, J., Lowe, S. W. (March 2016) Pten loss promotes MAPK pathway dependency in HER2/neu breast carcinomas. Proc Natl Acad Sci U S A, 113 (11). pp. 3030-3035. ISSN 1091-6490 (Electronic)0027-8424 (Linking)

Egeblad, M. (February 2019) Neutrophil extracellular traps promote breast cancer metastasis. Cancer Research, 79 (13 S). ISSN 0008-5472

Egeblad, M., Jaattela, M. (June 2000) Cell death induced by TNF or serum starvation is independent of ErbB receptor signaling in MCF-7 breast carcinoma cells. International Journal of Cancer, 86 (5). pp. 617-25. ISSN 0020-7136 (Print)0020-7136

Egeblad, M., Kouros-Mehr, H., Welm, B. E., Ortega, N., Cunha, G. R., Werb, Z. (November 2002) MMP-9 in mouse mammary cancer. Molecular Biology of the Cell, 13. 209A-210A. ISSN 1059-1524

Egeblad, M., Mortensen, O. H., Jaattela, M. (October 2001) Truncated ErbB2 receptor enhances ErbB1 signaling and induces reversible, ERK-independent loss of epithelial morphology. International Journal of Cancer, 94 (2). pp. 185-91. ISSN 0020-7136 (Print)0020-7136

Egeblad, M., Nakasone, E. S., Werb, Z. (June 2010) Tumors as Organs: Complex Tissues that Interface with the Entire Organism. Developmental Cell, 18 (6). pp. 884-901. ISSN 1534-5807

Eifert, C., Wang, X., Kokabee, L., Kourtidis, A., Jain, R., Gerdes, M. J., Conklin, D. S. (October 2013) A novel isoform of the B cell tyrosine kinase BTK protects breast cancer cells from apoptosis. Genes Chromosomes and Cancer, 52 (10). pp. 961-975. ISSN 10452257

Ekholm-Reed, S., Mendez, J., Tedesco, D., Zetterberg, A., Stillman, B., Reed, S. I. (June 2004) Deregulation of cyclin E in human cells interferes with prereplication complex assembly. Journal of Cell Biology, 165 (6). pp. 789-800. ISSN 0021-9525

Ewald, A. J., Werb, Z., Egeblad, M. (February 2011) Dynamic, Long-Term In Vivo Imaging of Tumor–Stroma Interactions in Mouse Models of Breast Cancer Using Spinning-Disk Confocal Microscopy. Cold Spring Harbor Protocols, 2011 (2).

Fackenthal, J. D., Cartegni, L., Krainer, A. R., Olopade, O. I. (September 2002) BRCA2 T2722R is a deleterious allele that causes exon skipping. American Journal of Human Genetics, 71 (3). pp. 625-631. ISSN 0002-9297

Feigin, M. E., Akshinthala, S. D., Araki, K., Rosenberg, A. Z., Muthuswamy, L. B., Martin, B., Lehmann, B. D., Berman, H. K., Pietenpol, J. A., Cardiff, R. D., Muthuswamy, S. K. (March 2014) Mislocalization of the cell polarity protein Scribble promotes mammary tumorigenesis and is associated with basal breast cancer. Cancer Research, 74 (11). pp. 3180-3194. ISSN 0008-5472

Feigin, M. E., Muthuswamy, S. K. (February 2008) ErbB receptors and cell polarity: New pathways and paradigms for understanding cell migration and invasion. Experimental Cell Research, 315 (4). pp. 707-716. ISSN 0014-4827

Feigin, M. E., Xue, B., Hammell, M. C., Muthuswamy, S. K. (March 2014) G-protein-coupled receptor GPR161 is overexpressed in breast cancer and is a promoter of cell proliferation and invasion. Proceedings of the National Academy of Sciences of the United States of America, 111 (11). pp. 4191-6. ISSN 0027-8424

Feigman, M.J., Moss, M.A., Chen, C., Cyrill, S.L., Cicone, M.F., Trousdell, M.C., Yang, S.-T., Frey, W.D., Wilkinson, J.E., Dos Santos, C. O. (May 2020) Pregnancy Reprograms the Epigenome of Mammary Epithelial Cells and Blocks the Development of Premalignant Lesions. Nat Commun, 11 (1). p. 2649. ISSN 2041-1723

Fein, M. R., He, X. Y., Almeida, A. S., Pommier, A., Bruzas, E., Eberhardt, A., Wilkinson, J. E., dos Santos, C., Egeblad, M. (May 2018) Targeting cancer cell CCR2 enhances synergistic immune surveillance in breast cancer. Cancer Research, 78 (10 Sup). pp. 75-76. ISSN 0008-5472

Ferraro, Emanuela, Singh, Jasmeet, Patil, Sujata, Razavi, Pedram, Modi, Shanu, Chandarlapaty, Sarat, Barrio, Andrea V, Malani, Rachna, Mellinghoff, Ingo K, Boire, Adrienne, Wen, Hannah Y, Brogi, Edi, Seidman, Andrew D, Norton, Larry, Robson, Mark E, Dang, Chau T (March 2022) Incidence of brain metastases in patients with early HER2-positive breast cancer receiving neoadjuvant chemotherapy with trastuzumab and pertuzumab. npj Breast Cancer, 8 (1). p. 37. ISSN 2374-4677

Fraenkel, Merav, Novack, Victor, Mizrakli, Yuval, Koretz, Michael, Siris, Ethel, Norton, Larry, Shafat, Tali, Geffen, David B (February 2022) Bone mineral density in women newly diagnosed with breast cancer: a prospective cohort study. npj Breast Cancer, 8 (1). p. 21. ISSN 2374-4677

Fujii, T, Rehman, H, Chung, SY, Shen, J, Newman, J, Wu, V, Hines, A, Azimi-Nekoo, E, Fayyaz, F, Lee, M, Raptis, G, Egeblad, M, Zhu, X (July 2021) Treatment with granulocyte-colony stimulating factor (G-CSF) is not associated with increased risk of brain metastasis in patients with de novo stage IV breast cancer. Journal of Cancer, 12 (18). pp. 5687-5692. ISSN 1837-9664

Gholami, S, Chen, C-H, Gao, S, Lou, E, Fujisawa, S, Carson, J, Nnoli, JE, Chou, T-C, Bromberg, J, Fong, Y (July 2014) Role of MAPK in oncolytic herpes viral therapy in triple-negative breast cancer. Cancer Gene Therapy, 21 (7). pp. 283-289. ISSN 0929-1903

Gholami, Sepideh, Chen, Chun-Hao, Belin, Laurence J, Lou, Emil, Fujisawa, Sho, Antonacci, Caroline, Carew, Amanda, Chen, Nanhai G, De Brot, Marina, Zanzonico, Pat B, Szalay, Aladar A, Fong, Yuman (March 2013) Vaccinia virus GLV-1h153 is a novel agent for detection and effective local control of positive surgical margins for breast cancer. Breast Cancer Research, 15 (2). R26. ISSN 1465-5411

Gholami, Sepideh, Chen, Chun-Hao, Lou, Emil, Belin, Laurence J, Fujisawa, Sho, Longo, Valerie A, Chen, Nanhai G, Gönen, Mithat, Zanzonico, Pat B, Szalay, Aladar A, Fong, Yuman (February 2014) Vaccinia virus GLV-1h153 in combination with 131I shows increased efficiency in treating triple-negative breast cancer. The FASEB Journal, 28 (2). pp. 676-682. ISSN 0892-6638

Gholami, Sepideh, Marano, Andrew, Chen, Nanhai G, Aguilar, Richard J, Frentzen, Alexa, Chen, Chun-Hao, Lou, Emil, Fujisawa, Sho, Eveno, Clarisse, Belin, Laurence, Zanzonico, Pat, Szalay, Aladar, Fong, Yuman (December 2014) A novel vaccinia virus with dual oncolytic and anti-angiogenic therapeutic effects against triple-negative breast cancer. Breast Cancer Research and Treatment, 148 (3). pp. 489-499. ISSN 0167-6806

Gialelis, Timothy L, Wang, Zifei, Homer, Joshua A, Yang, Wen-Hsuan, Chung, Taemoon, Hu, Qingting, Smedley, Christopher J, Pawar, Nitin J, Upadhyay, Nitinkumar S, Tuveson, David A, Lyons, Scott K, Lukey, Michael J, Moses, John E (April 2023) Inhibition of mitochondrial metabolism by (-)-jerantinine A: synthesis and biological studies in triple-negative breast cancer cells. MedChemComm, 14 (4). pp. 710-714. ISSN 2632-8682

Grabenstetter, Anne, Brogi, Edi, Thompson, Donna M, Blinder, Victoria S, Norton, Larry, Morrow, Monica, Robson, Mark E, Wen, Hannah Y (September 2023) Impact of reactive changes on multigene testing: histopathologic analysis of low-grade breast cancers with high-risk 21-gene recurrence scores. Breast Cancer Research and Treatment. ISSN 0167-6806

Grabenstetter, Anne, Brogi, Edi, Zhang, Hong, Razavi, Pedram, Reis-Filho, Jorge S, VanZee, Kimberly J, Norton, Larry, Wen, Hannah Y (August 2022) Solid-basaloid variant of adenoid cystic carcinoma of the breast with near complete response to neoadjuvant chemotherapy. npj Breast Cancer, 8 (1). p. 93. ISSN 2374-4677

Greene, K. S., Lukey, M. J., Wang, X., Blank, B., Druso, J. E., Lin, M. J., Stalnecker, C. A., Zhang, C., Negron Abril, Y., Erickson, J. W., Wilson, K. F., Lin, H., Weiss, R. S., Cerione, R. A. (December 2019) SIRT5 stabilizes mitochondrial glutaminase and supports breast cancer tumorigenesis. Proc Natl Acad Sci U S A. ISSN 1091-6490 (Public Dataset)

Guix, M., de Matos Granja, N., Meszoely, I., Adkins, T. B., Wieman, B. M., Frierson, K. E., Sanchez, V., Sanders, M. E., Grau, A. M., Mayer, I. A., Pestano, G., Shyr, Y., Muthuswamy, S., Calvo, B., Krontiras, H., Krop, I. E., Kelley, M. C., Arteaga, C. L. (February 2008) Short Preoperative Treatment With Erlotinib Inhibits Tumor Cell Proliferation in Hormone Receptor Positive Breast Cancers. J Clin Oncol, 26 (6). pp. 897-906.

Gupta, G. P., Perk, J., Acharyya, S., de Candia, P., Mittal, V., Todorova-Manova, K., Gerald, W. L., Brogi, E., Benezra, R., Massague, J. (December 2007) ID genes mediate tumor reinitiation during breast cancer lung metastasis. Proc Natl Acad Sci U S A, 104 (49). pp. 19506-11. ISSN 1091-6490 (Electronic)

Haakensen, V. D., Helland, A., Holmen, M. M., Hicks, J. B., Børresen-Dale, A. L. (September 2007) No genomic changes in mammographically dense breast. European Journal of Cancer Supplements, 5 (4). p. 99. ISSN 1359-6349

Hah, N., Danko, C. G., Core, L., Waterfall, J. J., Siepel, A., Lis, J. T., Kraus, W. L. (May 2011) A rapid, extensive, and transient transcriptional response to estrogen signaling in breast cancer cells. Cell, 145 (4). pp. 622-34. ISSN 0092-8674

Hamaguchi, M., Meth, J. L., von Klitzing, C., Wei, W., Esposito, D., Rodgers, L., Walsh, T., Welcsh, P., King, M. C., Wigler, M. H. (October 2002) DBC2, a candidate for a tumor suppressor gene involved in breast cancer. Proceedings of the National Academy of Sciences of the United States of America, 99 (21). pp. 13647-13652. ISSN 0027-8424

Harrison, M., Li, J., Degenhardt, Y., Hoey, T., Powers, S. (August 2004) Wip1-deficient mice are resistant to common cancer genes. Trends in Molecular Medicine, 10 (8). pp. 359-361. ISSN 1471-4914

He, Xue-Yan, Gao, Yuan, Ng, David, Michalopoulou, Evdokia, George, Shanu, Adrover, Jose M, Sun, Lijuan, Albrengues, Jean, Daßler-Plenker, Juliane, Han, Xiao, Wan, Ledong, Wu, Xiaoli Sky, Shui, Longling S, Huang, Yu-Han, Liu, Bodu, Su, Chang, Spector, David L, Vakoc, Christopher R, Van Aelst, Linda, Egeblad, Mikala (February 2024) Chronic stress increases metastasis via neutrophil-mediated changes to the microenvironment. Cancer Cell. ISSN 1535-6108

Hicks, J. B., Krasnitz, A., Lakshmi, B., Navin, N. E., Riggs, M., Leibu, E., Esposito, D., Alexander, J., Troge, J. E., Grubor, V., Yoon, S., Wigler, M. H., Ye, K., Borresen-Dale, A. L., Naume, B., Schlicting, E., Norton, L., Hagerstrom, T., Skoog, L., Auer, G., Månér, S., Lundin, P., Zetterberg, A. (December 2006) Novel patterns of genome rearrangement and their association with survival in breast cancer. Genome Research, 16 (12). pp. 1465-79. ISSN 1088-9051

Hicks, J. B., McArthur, H., Tan, L. K., Patil, S., Wigler, M. H., Hudis, C., Norton, L. (May 2009) Topo2a and Her2 Co-Amplification Is Uncommon by High Resolution Representational Oligonucleotide Microarray Analysis (Roma) in Human Breast Cancer. Annals of Oncology, 20 (S2). ii22-23. ISSN 0923-7534

Hicks, J. B., Muthuswamy, L., Krasnitz, A., Navin, N. E., Riggs, M., Grubor, V., Esposito, D., Alexander, J., Troge, J. E., Wigler, M. H., Maner, S., Lundin, P., Zetterberg, A. (2005) High-resolution ROMA CGH and FISH analysis of aneuploid and diploid breast tumors. Cold Spring Harb Symp Quant Biol, 70. pp. 51-63. ISSN 1943-4456 (Electronic) 0091-7451 (Linking)

Ibrahim, Ayman M, Moss, Matthew A, Gray, Zane, Rojo, Michelle D, Burke, Caitlin M, Schwertfeger, Kathryn L, Dos Santos, Camila O, Machado, Heather L (2020) Diverse Macrophage Populations Contribute to the Inflammatory Microenvironment in Premalignant Lesions During Localized Invasion. Frontiers in Oncology, 10. p. 569985. ISSN 2234-943X

Kamalakaran, S., Varadan, V., Giercksky Russnes, H. E., Levy, D., Kendall, J. T., Janevski, A., Riggs, M., Banerjee, N., Synnestvedt, M., Schlichting, E., Kåresen, R., Shama Prasada, K., Rotti, H., Rao, R., Rao, L., Eric Tang, M. H., Satyamoorthy, K., Lucito, R., Wigler, M. H., Dimitrova, N., Naume, B., Borresen-Dale, A. L., Hicks, J. B. (February 2011) DNA methylation patterns in luminal breast cancers differ from non-luminal subtypes and can identify relapse risk independent of other clinical variables. Molecular Oncology, 5 (1). pp. 77-92.

Karpanen, T., Egeblad, M., Karkkainen, M. J., Kubo, H., Yla-Herttuala, S., Jaattela, M., Alitalo, K. (March 2001) Vascular endothelial growth factor C promotes tumor lymphangiogenesis and intralymphatic tumor growth. Cancer Research, 61 (5). pp. 1786-90. ISSN 0008-5472 (Print)0008-5472

Kato, M., Vasco, D. A., Sugino, R., Narushima, D., Krasnitz, A. (September 2017) Sweepstake evolution revealed by population-genetic analysis of copy-number alterations in single genomes of breast cancer. R Soc Open Sci, 4 (9). p. 171060. ISSN 2054-5703 (Print)2054-5703

Ke, J., Zhao, Z., Hong, S. H., Bai, S., He, Z., Malik, F., Xu, J., Zhou, L., Chen, W., Martin-Trevino, R., Wu, X., Lan, P., Yi, Y., Ginestier, C., Ibarra, I., Shang, L., McDermott, S., Luther, T., Clouthier, S. G., Wicha, M. S., Liu, S. (January 2015) Role of microRNA221 in regulating normal mammary epithelial hierarchy and breast cancer stem-like cells. Oncotarget, 6 (6). p. 3709. ISSN 1949-2553

Kees, T., Egeblad, M. (July 2011) Innate Immune Cells in Breast Cancer - From Villains to Heroes? Journal of Mammary Gland Biology and Neoplasia, 16 (3). pp. 189-203. ISSN 1573-7039 (Electronic)1083-3021 (Linking)

Kim, E. J., Helfman, D. M. (August 2003) Characterization of the metastasis-associated protein, S100A4 - Roles of calcium binding and dimerization in cellular localization and interaction with myosin. Journal of Biological Chemistry, 278 (32). pp. 30063-30073. ISSN 0021-9258

Knott, S. R. V., Wagenblast, E., Khan, S., Kim, S. Y., Soto, M., Wagner, M., Turgeon, M. O., Fish, L., Erard, N., Gable, A. L., Maceli, A. R., Dickopf, S., Papachristou, E. K., D'Santos, C. S., Carey, L. A., Wilkinson, J. E., Harrell, J. C., Perou, C. M., Goodarzi, H., Poulogiannis, G., Hannon, G. J. (February 2018) Asparagine bioavailability governs metastasis in a model of breast cancer. Nature, 554 (7692). pp. 378-381. ISSN 0028-0836

Kouros-Mehr, H., Bechis, S. K., Slorach, E. M., Littlepage, L. E., Egeblad, M., Ewald, A. J., Pai, S. Y., Ho, I. C., Werb, Z. (2008) GATA-3 Links Tumor Differentiation and Dissemination in a Luminal Breast Cancer Model. Cancer Cell, 13 (2). pp. 141-152. ISSN 15356108 (ISSN)

Krishnan, N., Koveal, D., Miller, D. H., Xue, B., Akshinthala, S. D., Kragelj, J., Jensen, M. R., Gauss, C. M., Page, R., Blackledge, M., Muthuswamy, S. K., Peti, W., Tonks, N. K. (May 2014) Targeting the disordered C terminus of PTP1B with an allosteric inhibitor. Nature Chemical Biology, 10 (7). pp. 558-566. ISSN 15524450

Larsen, S. S., Egeblad, M., Jaattela, M., Lykkesfeldt, A. E. (November 1999) Acquired antiestrogen resistance in MCF-7 human breast cancer sublines is not accomplished by altered expression of receptors in the ErbB-family. Breast cancer research and treatment, 58 (1). pp. 41-56. ISSN 0167-6806 (Print)0167-6806

Lei, Pin-Ji, Pereira, Ethel R, Andersson, Patrik, Amoozgar, Zohreh, Van Wijnbergen, Jan Willem, O'Melia, Meghan J, Zhou, Hengbo, Chatterjee, Sampurna, Ho, William W, Posada, Jessica M, Kumar, Ashwin S, Morita, Satoru, Menzel, Lutz, Chung, Charlie, Ergin, Ilgin, Jones, Dennis, Huang, Peigen, Beyaz, Semir, Padera, Timothy P (September 2023) Cancer cell plasticity and MHC-II-mediated immune tolerance promote breast cancer metastasis to lymph nodes. Journal of Experimental Medicine, 220 (9). e20221847. ISSN 0022-1007 (Public Dataset)

Lewis, Steven M, Callaway, Mackenzie K, Dos Santos, Camila O (November 2022) Clinical applications of 3D normal and breast cancer organoids: A review of concepts and methods. Experimental Biology and Medicine. p. 15353702221131877. ISSN 1535-3702

Li, J., Yang, Y., Peng, Y., Austin, R. J., van Eyndhoven, G., Nguyen, K. C. Q., Gabriele, T., McCurrach, M. E., Marks, J. R., Hoey, T., Lowe, S. W., Powers, S. (June 2002) Oncogenic properties of PPM1D located within a breast cancer amplification epicenter at 17q23. Nature Genetics, 31 (2). pp. 133-134. ISSN 1061-4036

Li, Y., Welm, B., Podsypanina, K., Huang, S., Chamorro, M., Zhang, X., Rowlands, T., Egeblad, M., Cowin, P., Werb, Z., Tan, L. K., Rosen, J. M., Varmus, H. E. (2003) Evidence that transgenes encoding components of the Wnt signaling pathway preferentially induce mammary cancers from progenitor cells. Proceedings of the National Academy of Sciences of the United States of America, 100 (26). pp. 15853-15858. ISSN 00278424 (ISSN)

Ling, C., Zuo, D., Xue, B., Muthuswamy, S. K., Muller, W. J. (2010) A novel role for 14-3-3σ in regulating epithelial cell polarity. Genes and Development, 24 (9). pp. 947-956.

Liu, H. X., Cartegni, L., Zhang, M. Q., Krainer, A. R. (January 2001) A mechanism for exon skipping caused by nonsense or missense mutations in BRCA1 and other genes. Nature Genetics, 27 (1). pp. 55-58. ISSN 1061-4036

Liu, S., Patel, S. H., Ginestier, C., Ibarra, I., Martin-Trevino, R., Bai, S., McDermott, S. P., Shang, L., Ke, J., Ou, S. J., Heath, A., Zhang, K. J., Korkaya, H., Clouthier, S. G., Charafe-Jauffret, E., Birnbaum, D., Hannon, G. J., Wicha, M. S. (2012) MicroRNA93 regulates proliferation and differentiation of normal and malignant breast stem cells. PLoS Genetics, 8 (6). ISSN 15537390 (ISSN)

Lowe, S. W. (2005) Evading p53 action during tumor development and therapy. Breast Cancer Research, 7. S12-S12. ISSN 1465-5411

Lucs, A. V., Muller, W. J., Muthuswamy, S. K. (January 2010) Shc is required for ErbB2-induced inhibition of apoptosis but is dispensable for cell proliferation and disruption of cell polarity. Oncogene, 29 (2). pp. 174-187. ISSN 0950-9232

Lukey, M. J., Cluntun, A. A., Katt, W. P., Lin, M. J., Druso, J. E., Ramachandran, S., Erickson, J. W., Le, H. H., Wang, Z. E., Blank, B., Greene, K. S., Cerione, R. A. (October 2019) Liver-Type Glutaminase GLS2 Is a Druggable Metabolic Node in Luminal-Subtype Breast Cancer. Cell Rep, 29 (1). 76-88 e7. ISSN 2211-1247

Lukey, M. J., Greene, K. S., Erickson, J. W., Wilson, K. F., Cerione, R. A. (April 2016) The oncogenic transcription factor c-Jun regulates glutaminase expression and sensitizes cells to glutaminase-targeted therapy. Nat Commun, 7. p. 11321. ISSN 2041-1723

Mai, Nicholas, Dos Anjos, Carlos H, Razavi, Pedram, Safonov, Anton, Patil, Sujata, Chen, Yuan, Drago, Joshua Z, Modi, Shanu, Bromberg, Jacqueline F, Dang, Chau T, Liu, Dazhi, Norton, Larry, Robson, Mark, Chandarlapaty, Sarat, Jhaveri, Komal (May 2024) Predictors of Response to CDK4/6i Retrial After Prior CDK4/6i Failure in ER+ Metastatic Breast Cancer. Res Sq.

Man, A. K., Young, L. J. T., Tynan, J. A., Lesperance, J., Egeblad, M., Werb, Z., Hauser, C. A., Muller, W. J., Cardiff, R. D., Oshima, R. G. (2003) Ets2-Dependent Stromal Regulation of Mouse Mammary Tumors. Molecular and Cellular Biology, 23 (23). pp. 8614-8625. ISSN 02707306 (ISSN)

Martelotto, L. G., Baslan, T., Kendall, J., Rodgers, L., Cox, H., King, T. A., Weigelt, B., Hicks, J., Reis, J. S. (February 2016) Single cell sequencing analysis of formalin-fixed paraffin-embedded ductal carcinomas in situ and invasive breast cancers reveals clonal selection in the progression from in situ to invasive disease. Cancer Research, 76 (Supple). Abstract P2-05. ISSN 0008-5472

Mazurek, A., Luo, W., Krasnitz, A., Hicks, J., Powers, R. S., Stillman, B. (2012) DDX5 regulates DNA replication and is required for cell proliferation in a subset of breast cancer cells. Cancer Discovery, 2 (9). pp. 812-825. ISSN 21598274 (ISSN)

McArthur, H. L., Brogi, E., Patil, S., Wigler, M. H., Norton, L., Hicks, J. B., Hudis, C. A. (September 2009) High resolution microarray copy number analysis (array CGH) suggests that determination of HER2 amplification by FISH (FISH plus ) is inaccurate in human breast cancer specimens that are HER2 2+by immunohistochemistry (IHC2+). European Journal of Cancer Supplements, 7 (2). p. 88. ISSN 1359-6349

McArthur, H. L., Tan, L. K., Patil, S., Wigler, M. H., Hudis, C. A., Hicks, J. B., Norton, L. (January 2009) High resolution representational oligonucleotide microarray analysis (ROMA) suggests that TOPO2 and HER2 co-amplification is uncommon in human breast cancer. Cancer Res, 69 (2, Sup). 163S-163S. ISSN 0008-5472

Mehta, M. S., Vazquez, A., Kulkarni, D. A., Kerrigan, J. E., Atwal, G. S., Metsugi, S., Toppmeyer, D. L., Levine, A. J., Hirshfield, K. M. (February 2011) Polymorphic variants in TSC1 and TSC2 and their association with breast cancer phenotypes. Breast Cancer Research and Treatment, 125 (3). pp. 861-868.

Morimoto-Tomita, M., Uchimura, K., Bistrup, A., Lum, D. H., Egeblad, M., Boudreau, N., Werb, Z., Rosen, S. D. (2005) Sulf-2, a proangiogenic heparan sulfate endosulfatase, is upregulated in breast cancer. Neoplasia, 7 (11). pp. 1001-1010. ISSN 15228002 (ISSN)

Moukarzel, Lea A, Ferrando, Lorenzo, Da Cruz Paula, Arnaud, Brown, David N, Geyer, Felipe C, Pareja, Fresia, Piscuoglio, Salvatore, Papanastasiou, Anastasios D, Fusco, Nicola, Marchiò, Caterina, Abu-Rustum, Nadeem R, Murali, Rajmohan, Brogi, Edi, Wen, Hannah Y, Norton, Larry, Soslow, Robert A, Vincent-Salomon, Anne, Reis-Filho, Jorge S, Weigelt, Britta (April 2021) The genetic landscape of metaplastic breast cancers and uterine carcinosarcomas. Molecular Oncology, 15 (4). pp. 1024-1039. ISSN 1574-7891

Mousset, Alexandra, Lecorgne, Enora, Bourget, Isabelle, Lopez, Pascal, Jenovai, Kitti, Cherfils-Vicini, Julien, Dominici, Chloé, Rios, Géraldine, Girard-Riboulleau, Cédric, Liu, Bodu, Spector, David L, Ehmsen, Sidse, Renault, Shufang, Hego, Caroline, Mechta-Grigoriou, Fatima, Bidard, François-Clément, Terp, Mikkel Green, Egeblad, Mikala, Gaggioli, Cédric, Albrengues, Jean (April 2023) Neutrophil extracellular traps formed during chemotherapy confer treatment resistance via TGF-β activation. Cancer Cell, 41 (4). 757-775.e10. ISSN 1535-6108 (Public Dataset)

Mu, D., Chen, L. Y., Zhang, X. P., See, L. H., Koch, C. M., Yen, C., Tong, J. J., Spiegel, L., Nguyen, K. C. Q., Servoss, A., Peng, Y., Pei, L., Marks, J. R., Lowe, S. W., Hoey, T., Jan, L. Y., McCombie, W. R., Wigler, M. H., Powers, S. (March 2003) Genomic amplification and oncogenic properties of the KCNK9 potassium channel gene. Cancer Cell, 3 (3). pp. 297-302. ISSN 1535-6108

Muthuswamy, S. K. (2011) 3D culture reveals a signaling network. Breast Cancer Research, 13 (1). ISSN 1465-542X

Muthuswamy, S. K. (October 2012) Autocrine prolactin: an emerging market for homegrown (prolactin) despite the imports. Genes Dev, 26 (20). pp. 2253-8. ISSN 1549-5477 (Electronic)0890-9369 (Linking)

Muthuswamy, S. K. (August 2006) ErbB2 makes beta 4 integrin an accomplice in tumorigenesis. Cell, 126 (3). pp. 443-5. ISSN 0092-8674 (Print)

Muthuswamy, S. K. (2005) Regulation of epithelial cell polarity during carcinogenesis. Breast Cancer Research, 7. S7-S7. ISSN 1465-5411

Muthuswamy, S. K. (April 2011) Trastuzumab resistance: all roads lead to SRC. Nature Medicine, 17 (4). pp. 416-8. ISSN 1078-8956

Muthuswamy, S. K., Li, D. M., Lelievre, S., Bissell, M. J., Brugge, J. S. (September 2001) ErbB2, but not ErbB1, reinitiates proliferation and induces luminal repopulation in epithelial acini. Nature Cell Biology, 3 (9). pp. 785-792. ISSN 1465-7392

Nakasone, E. S., Askautrud, H. A., Egeblad, M. (2013) Live imaging of drug responses in the tumor microenvironment in mouse models of breast cancer. Journal of Visualized Experiments (73). ISSN 1940-087X (Electronic)1940-087X (Linking)

Nattestad, M., Goodwin, S., Ng, K., Baslan, T., Sedlazeck, F., Rescheneder, P., Garvin, T., Fang, H., Gurtowski, J., Hutton, E., Tseng, E., Chin, J., Beck, T., Sundaravadanam, Y., Kramer, M., Antoniou, E., McPherson, J., Hicks, J., McCombie, W. R., Schatz, M. C. (August 2018) Complex rearrangements and oncogene amplifications revealed by long-read DNA and RNA sequencing of a breast cancer cell line. Genome Res, 28 (8). pp. 1126-1135. ISSN 1088-9051

Navin, N. E., Kendall, J. T., Troge, J. E., Andrews, P., Rodgers,  L., McIndoo, J., Cook, K., Stepansky,  A., Levy, D., Esposito, D., Muthuswamy, L., Krasnitz, A., McCombie, W. R., Hicks, J. B., Wigler, M. H. (2011) Tumour evolution inferred by single-cell sequencing. Nature, 472 (7341). pp. 90-94. ISSN 00280836 (ISSN)

Navin, N. E., Krasnitz, A., Rodgers, L., Cook, K., Meth, J. L., Kendall, J. T., Riggs, M., Eberling, Y., Troge, J. E., Grubor, V., Levy, D., Lundin, P., Månér, S., Zetterberg, A., Hicks, J. B., Wigler, M. H. (January 2010) Inferring tumor progression from genomic heterogeneity. Genome Research, 20 (1). pp. 68-80.

Nielsen, B. S., Egeblad, M., Rank, F., Askautrud, H. A., Pennington, C. J., Pedersen, T. X., Christensen, I. J., Edwards, D. R., Werb, Z., Lund, L. R. (2008) Matrix metalloproteinase 13 is induced in fibroblasts in polyomavirus middle T antigen-driven mammary carcinoma without influencing tumor progression. PLoS One, 3 (8). ISSN 19326203 (ISSN)

Niida, A., Smith, A. D., Imoto, S., Aburatani, H., Zhang, M. Q., Akiyama, T. (February 2009) Gene set-based module discovery in the breast cancer transcriptome. BMC Bioinformatics, 10. p. 71. ISSN 1471-2105

Niida, A., Smith, A. D., Imoto, S., Tsutsumi, S., Aburatani, H., Zhang, M. Q., Akiyama, T. (September 2008) Integrative bioinformatics analysis of transcriptional regulatory programs in breast cancer cells. BMC Bioinformatics, 9. p. 404.

Nolan, D. J., Ciarrocchi, A., Mellick, A. S., Jaggi, J. S., Bambino, K., Gupta, S., Heikamp, E., McDevitt, M. R., Scheinberg, D. A., Benezra, R., Mittal, V. (June 2007) Bone marrow-derived endothelial progenitor cells are a major determinant of nascent tumor neovascularization. Genes Dev, 21 (12). pp. 1546-58. ISSN 0890-9369 (Print)

Nolan, M. E., Aranda, V., Lee, S., Lakshmi, B., Basu, S., Allred, D. C., Muthuswamy, S. K. (October 2008) The polarity protein Par6 induces cell proliferation and is overexpressed in breast cancer. Cancer Res, 68 (20). pp. 8201-9.

Ordway, J. M., Budiman, M. A., Korshunova, Y., Maloney, R. K., Bedell, J. A., Citek, R. W., Bacher, B., Peterson, S., Rohlfing, T., Hall, J., Brown, R., Lakey, N., Doerge, R. W., Martienssen, R. A., Leon, J., McPherson, J. D., Jeddeloh, J. A. (December 2007) Identification of novel high-frequency DNA methylation changes in breast cancer. PLoS ONE, 2 (12). e1314.

Page, David B, Beal, Kathryn, Linch, Stefanie N, Spinelli, Kateri J, Rodine, Micaela, Halpenny, Darragh, Modi, Shanu, Patil, Sujata, Young, Robert J, Kaley, Thomas, Merghoub, Taha, Redmond, David, Wong, Phillip, Barker, Christopher A, Diab, Adi, Norton, Larry, McArthur, Heather L (April 2022) Brain radiotherapy, tremelimumab-mediated CTLA-4-directed blockade +/- trastuzumab in patients with breast cancer brain metastases. npj Breast Cancer, 8 (1). p. 50. ISSN 2374-4677

Park, Jae-Hyun, Rasch, Morten Grønbech, Qiu, Jing, Lund, Ida Katrine, Egeblad, Mikala (May 2015) Presence of Insulin-Like Growth Factor Binding Proteins Correlates With Tumor-Promoting Effects of Matrix Metalloproteinase 9 in Breast Cancer. Neoplasia, 17 (5). pp. 421-433. ISSN 1476-5586

Park, S., Brugiolo, M., Akerman, M., Das, S., Urbanski, L., Geier, A., Kesarwani, A. K., Fan, M., Leclair, N., Lin, K. T., Hu, L., Hua, I., George, J., Muthuswamy, S. K., Krainer, A. R., Anczukow, O. (November 2019) Differential Functions of Splicing Factors in Mammary Transformation and Breast Cancer Metastasis. Cell Rep, 29 (9). 2672-2688.e7. ISSN 2211-1247 (Public Dataset)

Perurena, N., Zandueta, C., Martinez-Canarias, S., Moreno, H., Vicent, S., Almeida, A. S., Guruceaga, E., Gomis, R. R., Santisteban, M., Egeblad, M., Hermida, J., Lecanda, F. (January 2017) EPCR promotes breast cancer progression by altering SPOCK1/testican 1-mediated 3D growth. J Hematol Oncol, 10 (1). p. 23. ISSN 1756-8722 (Electronic)1756-8722 (Linking)

Piccart, Martine J, Hilbers, Florentine S, Bliss, Judith M, Caballero, Carmela, Frank, Elizabeth S, Renault, Patrick, Naït Kaoudjt, Rachida, Schumacher, Eva, Spears, Patricia A, Regan, Meredith M, Gelber, Richard D, Davidson, Nancy E, Norton, Larry, Winer, Eric P, BIG-NABCG Collaboration (December 2020) Road Map to Safe and Well-Designed De-escalation Trials of Systemic Adjuvant Therapy for Solid Tumors. Journal of Clinical Oncology, 38 (34). pp. 4120-4129. ISSN 0732-183X

Pigati, L., Yaddanapudi, S. C. S., Iyengar, R., Kim, D. J., Hearn, S. A., Danforth, D., Hastings, M. L., Duelli, D. M. (2010) Selective release of MicroRNA species from normal and malignant mammary epithelial cells. PLoS ONE, 5 (10). Artical number e13515. ISSN 19326203

Pineau, P., Volinia, S., McJunkin, K., Marchio, A., Battiston, C., Terris, B., Mazzaferro, V., Lowe, S. W., Croce, C. M., Dejean, A. (January 2010) miR-221 overexpression contributes to liver tumorigenesis. Proceedings of the National Academy of Sciences of the United States of America, 107 (1). pp. 264-269. ISSN 0027-8424

Piscuoglio, S., Murray, M., Ng, C. K. Y., Rocco, E. G., Martelotto, L. G., Bidard, F. C., Eberle, C. A., Fusco, N., Sakr, R. A., De Mattos-Arruda, L., Lim, R., Baslan, T., Hicks, J., King, T. A., Brogi, E., Norton, L., Weigelt, B., Hudis, C. A., Reis, J. S. (May 2015) The genomic landscape of male breast cancers. Cancer Research, 75 (9 Supp). ISSN 0008-5472

Piscuoglio, S., Ng, C. K., Murray, M. P., Guerini-Rocco, E., Martelotto, L. G., Geyer, F. C., Bidard, F. C., Berman, S., Fusco, N., Sakr, R. A., Eberle, C., De Mattos-Arruda, L., Macedo, G. S., Akram, M., Baslan, T., Hicks, J., King, T. A., Brogi, E., Norton, L., Weigelt, B., Hudis, C. A., Reis-Filho, J. S. (March 2016) The Genomic Landscape of Male Breast Cancers. Clin Cancer Res, 22 (16). pp. 4045-56. ISSN 1078-0432 (Electronic)1078-0432 (Linking)

Png, K. J., Yoshida, M., Zhang, X. H. F., Shu, W., Lee, H., Rimner, A., Chan, T. A., Comen, E., Andrade, V. P., Kim, S. W., King, T. A., Hudis, C. A., Norton, L., Hicks, J. B., Massagué, J., Tavazoie, S. F. (February 2011) MicroRNA-335 inhibits tumor reinitiation and is silenced through genetic and epigenetic mechanisms in human breast cancer. Genes and Development, 25 (3). pp. 226-231. ISSN 08909369

Puckett, L., Fein, M. R., He, X., Egeblad, M. (2017) Targeting Tumor-Mediated Immune Suppression in a Murine Model of Breast Cancer: Radiation and Chemokine Receptor CCR2. International Journal of Radiation Oncology*Biology*Physics, 99 (2, Sup). S164. ISSN 0360-3016

Qian, Zhe, Song, Dongyan, Ipsaro, Jonathan J, Bautista, Carmelita, Joshua-Tor, Leemor, Yeh, Johannes T-H, Tonks, Nicholas K (September 2023) Manipulating PTPRD function with ectodomain antibodies. Genes and Development. ISSN 0890-9369

Ramesh, M., Krishnan, N., Muthuswamy, S. K., Tonks, N. K. (April 2015) A Novel Phosphatidic Acid-Protein Tyrosine Phosphatase D2 Axis is Essential for ERBB2 Signaling in Mammary Epithelial Cells. Journal of Biological Chemistry, 290 (15). pp. 9646-9659. ISSN 0021-9258

Reginato, M. J., Muthuswamy, S. K. (2006) Illuminating the center: Mechanisms regulating lumen formation and maintenance in mammary morphogenesis. Journal of Mammary Gland Biology and Neoplasia, 11 (3-4). pp. 205-211. ISSN 10833021

Ren, Zuen, Dharmaratne, Malindrie, Liang, Huizhi, Benard, Outhiriaradjou, Morales-Gallego, Miriam, Suyama, Kimita, Kumar, Viney, Fard, Atefeh Taherian, Kulkarni, Ameya S, Prystowsky, Michael, Mar, Jessica C, Norton, Larry, Hazan, Rachel B (January 2024) Redox signalling regulates breast cancer metastasis via phenotypic and metabolic reprogramming due to p63 activation by HIF1α. British Journal of Cancer. ISSN 0007-0920 (Public Dataset)

Ren, Zuen, Liang, Huizhi, Galbo, Phillip M, Dharmaratne, Malindrie, Kulkarni, Ameya S, Fard, Atefeh Taherian, Aoun, Marie Louise, Martinez-Lopez, Nuria, Suyama, Kimita, Benard, Outhiriaradjou, Zheng, Wei, Liu, Yang, Albanese, Joseph, Zheng, Deyou, Mar, Jessica C, Singh, Rajat, Prystowsky, Michael B, Norton, Larry, Hazan, Rachel B (February 2022) Redox signaling by glutathione peroxidase 2 links vascular modulation to metabolic plasticity of breast cancer. Proceedings of the National Academy of Sciences of USA, 119 (8). e2107266119-e2107266119. ISSN 0027-8424

Rosa-Rosa, J. M., Gracia-Aznarez, F. J., Hodges, E., Pita, G., Rooks, M., Xuan, Z., Bhattacharjee, A., Brizuela, L., Silva, J. M., Hannon, G. J., Benitez, J. (2010) Deep sequencing of target linkage assay-identified regions in familial breast cancer: methods, analysis pipeline and troubleshooting. PLoS One, 5 (4). e9976. ISSN 1932-6203

Rozenblit, M., Hendrickx, W., Heguy, A., Chiriboga, L., Loomis, C., Ray, K., Darvishian, F., Egeblad, M., Demaria, S., Marincola, F. M., Bedognetti, D., Adams, S. (June 2019) Transcriptomic profiles conducive to immune-mediated tumor rejection in human breast cancer skin metastases treated with Imiquimod. Sci Rep, 9 (1). p. 8572. ISSN 2045-2322

Russnes, H. G., Navin, N., Hicks, J. B., Borresen-Dale, A. L. (October 2011) Insight into the heterogeneity of breast cancer through next-generation sequencing. Journal of Clinical Investigation, 121 (10). pp. 3810-3818. ISSN 0021-9738

Russnes, H. G., Sorlie, T., Krasnitz, A., Zetterberg, A., Naume, B., Borgen, E., Nesland, J. M., Wigler, M. H., Borresen-Dale, A. L., Hicks, J. B. (July 2008) Molecular subclassification of breast carcinomas based on aCGH, gene expression, IHC and ploidy - relevance for clinical outcome. European Journal of Cancer Supplements, 6 (9). p. 9. ISSN 1359-6349

Russnes, H. G., Vollan, H. K. M., Lingjærde, O. C., Krasnitz, A., Lundin, P., Naume, B., Sørlie, T., Borgen, E., Rye, I. H., Langerød, A., Chin, S. F., Teschendorff, A. E., Stephens, P. J., Månér, S., Schlichting, E., Baumbusch, L. O., Kåresen, R., Stratton, M. P., Wigler, M. H., Caldas, C., Zetterberg, A., Hicks, J. B., Børresen-Dale, A. L. (June 2010) Genomic architecture characterizes tumor progression paths and fate in breast cancer patients. Science Translational Medicine, 2 (38).

Russnes, H. G., Vollan, H. K. M., Sorlie, T., Krasnitz, A., Zetterberg, A., Naume, B., Borgen, E., Nesland, J. M., Wigler, M. H., Borresen-Dale, A. L., Hicks, J. B. (March 2009) Molecular subclassification of breast carcinomas based on aCGH reveals two major groups of tumors with common genomic, transcriptomic and clinicopathological characteristics. APMIS, 117 (3). pp. 238-239. ISSN 0903-4641

Rye, I. H., Lundin, P., Maner, S., Fjelldal, R., Naume, B., Wigler, M., Hicks, J., Borresen-Dale, A. L., Zetterberg, A., Russnes, H. G. (April 2015) Quantitative multigene FISH on breast carcinomas identifies der(1;16)(q10;p10) as an early event in luminal A tumors. Genes, Chromosomes & Cancer, 54 (4). pp. 235-48. ISSN 1045-2257

Ryu, S., Joshi, N., McDonnell, K., Woo, J., Choi, H., Gao, D., McCombie, W. R., Mittal, V. (February 2011) Discovery of novel human breast cancer micrornas from deep sequencing data by analysis of pri-microrna secondary structures. PLoS ONE, 6 (2).

Sacchini, Virgilio, Norton, Larry (September 2022) Escalating de-escalation in breast cancer treatment. Breast Cancer Research and Treatment, 195 (2). pp. 85-90. ISSN 0167-6806

Slepicka, P. F., Cyrill, S. L., Dos Santos, C. O. (July 2019) Pregnancy and Breast Cancer: Pathways to Understand Risk and Prevention. Trends Mol Med, 25 (10). pp. 866-881. ISSN 1471-4914

Somlo, George, Barlow, William, Moore, Halle, Gralow, Julie, Schott, Anne, Hayes, Daniel, Kuhn, Peter, Hicks, James, Lew, Danika, Tripathy, Debu, Hortobagyl, Gabriel (May 2015) Fulvestrant alone versus fulvestrant and everolimus versus fulvestrant, everolimus and anastrozole: A Phase III randomized, placebo-controlled trial in postmenopausal patients with hormone-receptor-positive stage IV breast cancer: SWOG-Clinical Trials Ini. Cancer Research, 75 (9 Supp). OT2-1. ISSN 1538-7445

Spector, D. L. (April 2017) The Role of Long Non-Coding RNAs in Nuclear Organization and Disease. Faseb Journal, 31 (Supple). Meeting Abstract 255.2. ISSN 0892-66381530-6860

Sun, P., Dong, P., Dai, K., Hannon, G. J., Beach, D. (December 1998) p53-independent role of MDM2 in TGF-beta1 resistance. Science, 282 (5397). pp. 2270-2. ISSN 0036-8075 (Print)

Sun, Lijuan, Han, Xiao, Egeblad, Mikala (December 2022) Isolation of mouse mammary carcinoma-derived macrophages and cancer cells for co-culture assays. STAR Protocols, 3 (4). p. 101833. ISSN 2666-1667 (In Press)

Sun, Lijuan, Kees, Tim, Almeida, Ana Santos, Liu, Bodu, He, Xue-Yan, Ng, David, Spector, David, McNeish, Iain A, Gimotty, Phyllis, Adams, Sylvia, Egeblad, Mikala (July 2020) Activating a collaborative innate-adaptive immune response to control breast and ovarian cancer metastasis. BioRxiv. (Unpublished)

Sutton, Elizabeth J, Braunstein, Lior Z, El-Tamer, Mahmoud B, Brogi, Edi, Hughes, Mary, Bryce, Yolanda, Gluskin, Jill S, Powell, Simon, Woosley, Alyssa, Tadros, Audree, Sevilimedu, Varadan, Martinez, Danny F, Toni, Larowin, Smelianskaia, Olga, Nyman, C Gregory, Razavi, Pedram, Norton, Larry, Fung, Maggie M, Sedorovich, James D, Sacchini, Virgilio, Morris, Elizabeth A (January 2021) Accuracy of Magnetic Resonance Imaging-Guided Biopsy to Verify Breast Cancer Pathologic Complete Response After Neoadjuvant Chemotherapy: A Nonrandomized Controlled Trial. Jama Network Open, 4 (1). e2034045. ISSN 2574-3805

Tang, M. H., Varadan, V., Kamalakaran, S., Zhang, M. Q., Dimitrova, N., Hicks, J. (2012) Major chromosomal breakpoint intervals in breast cancer co-localize with differentially methylated regions. Frontiers in Oncology, 2. p. 197. ISSN 2234-943X (Electronic)2234-943X (Linking)

Tang, M. H. E., Varadan, V., Kamalakaran, S., Zhang, M. Q., Dimitrova, N., Hicks, J. (2011) A method for finding novel associations between genome-wide copy number and dna methylation patterns. IEEE International Workshop on Genomic Signal Processing and Statistics (GENSIPS). pp. 78-82.

Taylor, C, Dodwell, D, McGale, P, Hills, RK, Berry, R, Bradley, R, Braybrooke, J, Clarke, M, Gray, R, Holt, F, Liu, Z, Pan, H, Peto, R, Straiton, E, Coles, C, Duane, F, Hennequin, C, Jones, G, Kühn, T, Oliveros, S, Overgaard, J, Pritchard, KI, Suh, CO, Beake, G, Boddington, C, Davies, C, Davies, L, Evans, V, Gay, J, Gettins, L, Godwin, J, James, S, Kerr, A, Liu, H, MacKinnon, E, Mannu, G, McHugh, T, Morris, P, Nakahara, M, Read, S, Taylor, H, Ferguson, J, Scheurlen, H, Zurrida, S, Galimberti, V, Ingle, J, Valagussa, P, Veronesi, U, Anderson, S, Tang, G, Fisher, B, Fossa, S, Valborg Reinertsen, K, Host, H, Muss, H, Holli, K, Albain, K, Arriagada, R, Bartlett, J, Bergsten-Nordström, E, Bliss, J, Brain, E, Carey, L, Coleman, R, Cuzick, J, Davidson, N, Del Mastro, L, Di Leo, A, Dignam, J, Dowsett, M, Ejlertsen, B, Francis, P, García-Sáenz, JA, Gelber, R, Gnant, M, Goetz, M, Goodwin, P, Halpin-Murphy, P, Hayes, D, Hill, C, Jagsi, R, Janni, W, Loibl, S, Mamounas, E, Martín, M, McIntosh, S, Mukai, H, Nekljudova, V, Norton, L, Ohashi, Y, Piccart, M, Pierce, L, Raina, V, Rea, D, Regan, M, Robertson, J, Rutgers, E, Salgado, R, Slamon, D, Spanic, T (January 2023) Radiotherapy to regional nodes in early breast cancer: an individual patient data meta-analysis of 14 324 women in 16 trials. The Lancet. ISSN 0140-6736

Thacker, Gatha, Henry, Samantha, Nandi, Ajeya, Debnath, Rahul, Singh, Snahlata, Nayak, Anupma, Susnik, Barbara, Boone, Melinda M, Zhang, Qing, Kesmodel, Susan B, Gumber, Sanjeev, Das, Gokul M, Kambayashi, Taku, Dos Santos, Camila O, Chakrabarti, Rumela (March 2023) Immature natural killer cells promote progression of triple-negative breast cancer. Science Translational Medicine, 15 (686). eabl4414. ISSN 1946-6234

Tonks, N. K., Muthuswamy, S. K. (March 2007) A Brake Becomes an Accelerator: PTP1B-A New Therapeutic Target for Breast Cancer. Cancer Cell, 11 (3). pp. 214-6. ISSN 1535-6108 (Print)

Truong, Thu H, Benner, Elizabeth A, Hagen, Kyla M, Temiz, Nuri A, Kerkvliet, Carlos Perez, Wang, Ying, Cortes-Sanchez, Emilio, Yang, Chieh-Hsiang, Trousdell, Marygrace C, Pengo, Thomas, Guillen, Katrin P, Welm, Bryan E, Dos Santos, Camila O, Telang, Sucheta, Lange, Carol A, Ostrander, Julie H (June 2021) PELP1/SRC-3-dependent regulation of metabolic PFKFB kinases drives therapy resistant ER+ breast cancer. Oncogene. ISSN 0950-9232

Utama, R., Bastian, A., Sadagopan, N., Jin, Y., Antoniou, E., Huang, Y., Lee, P., Atwal, G. (July 2018) Transcriptional landscape of stroma progression in the breast tumor microenvironment. Cancer Research, 78 (13 S). meeting abstract : LB-357. ISSN 0008-5472

Utama, Raditya, Bastian, Anja, Sadagopan, Narayanan, Jin, Ying, Antoniou, Eric, Gao, Qing, Huang, Yinghui J, Gopalakrishna-Pillai, Sailesh, Lee, Peter P, Atwal, Gurinder S (February 2019) Cell non-autonomous interactions during non-immune stromal progression in the breast tumor microenvironment. BioRxiv. (Unpublished)

Vareslija, D., McBryan, J., Fagan, A., Redmond, A., Hao, Y., Hill, A. D. K., Young, L. S. (May 2015) Adaptation to AI therapy in breast cancer can induce dynamic alterations in ER activity resulting in estrogen independent metastatic tumours. Cancer Research, 75 (9 supp). Abstract nr P3-05. ISSN 0008-5472

Vareslija, D., McBryan, J., Fagan, A., Redmond, A. M., Hao, Y., Sims, A. H., Turnbull, A. K., Dixon, J. M., P, O. Gaora, Hudson, L., Purcell, S., Hill, A. D., Young, L. (June 2016) Adaptation to AI therapy in breast cancer can induce dynamic alterations in ER activity resulting in estrogen independent metastatic tumours. Clin Cancer Res, 22 (11). pp. 2765-77. ISSN 1078-0432 (Electronic)1078-0432 (Linking)

Wagenblast, E., Soto, M., Gutierrez-Angel, S., Hartl, C. A., Gable, A. L., Maceli, A. R., Erard, N., Williams, A. M., Kim, S. Y., Dickopf, S., Harrell, J. C., Smith, A. D., Perou, C. M., Wilkinson, J. E., Hannon, G. J., Knott, S. R. (April 2015) A model of breast cancer heterogeneity reveals vascular mimicry as a driver of metastasis. Nature, 520 (7547). pp. 358-362. ISSN 0028-0836

Waldemarson, Sofia, Kurbasic, Emila, Krogh, Morten, Cifani, Paolo, Berggård, Tord, Borg, Åke, James, Peter (December 2016) Proteomic analysis of breast tumors confirms the mRNA intrinsic molecular subtypes using different classifiers: a large-scale analysis of fresh frozen tissue samples. Breast Cancer Research, 18 (1). ISSN 1465-542X

Walker II, W. H., Borniger, J. C., Surbhi, . , Zalenski, A. A., Muscarella, S. L., Fitzgerald, J. A., Zhang, N., Gaudier-Diaz, M. M., DeVries, A. C. (August 2017) Mammary Tumors Induce Central Pro-inflammatory Cytokine Expression, but Not Behavioral Deficits in Balb/C Mice. Sci Rep, 7 (1). p. 8152. ISSN 2045-2322 (Electronic)2045-2322 (Linking)

Wang, Zhikai, Moresco, Philip, Yan, Ran, Li, Jiayun, Gao, Ya, Biasci, Daniele, Yao, Min, Pearson, Jordan, Hechtman, Jaclyn F, Janowitz, Tobias, Zaidi, Raza M, Weiss, Matthew J, Fearon, Douglas T (January 2022) Carcinomas assemble a filamentous CXCL12-keratin-19 coating that suppresses T cell-mediated immune attack. Proceedings of the National Academy of Sciences of USA, 119 (4). e2119463119-e2119463119. ISSN 0027-8424

Ward, Zachary J, Atun, Rifat, Hricak, Hedvig, Asante, Kwanele, McGinty, Geraldine, Sutton, Elizabeth J, Norton, Larry, Scott, Andrew M, Shulman, Lawrence N (August 2021) The impact of scaling up access to treatment and imaging modalities on global disparities in breast cancer survival: a simulation-based analysis. The Lancet Oncology. ISSN 1470-2045

Weaver, Z., Montagna, C., Xu, X. L., Howard, T., Gadina, M., Brodie, S. G., Deng, C. X., Ried, T. (August 2002) Mammary tumors in mice conditionally mutant for Brca1 exhibit gross genomic instability and centrosome amplification yet display a recurring distribution of genomic imbalances that is similar to human breast cancer. Oncogene, 21 (33). pp. 5097-5107. ISSN 0950-9232

Westbrook, T. F., Martin, E. S., Schlabach, M. R., Leng, Y. M., Liang, A. C., Feng, B., Zhao, J. J., Roberts, T. M., Mandel, G., Hannon, G. J., DePinho, R. A., Chin, L., Elledge, S. J. (June 2005) A genetic screen for candidate tumor suppressors identifies REST. Cell, 121 (6). pp. 837-848. ISSN 0092-8674

Wojnarowicz, Paulina M, Escolano, Marta Garcia, Huang, Yun-Han, Desai, Bina, Chin, Yvette, Shah, Riddhi, Xu, Sijia, Yadav, Saurabh, Yaklichkin, Sergey, Ouerfelli, Ouathek, Soni, Rajesh Kumar, Philip, John, Montrose, David C, Healey, John H, Rajasekhar, Vinagolu K, Garland, William A, Ratiu, Jeremy, Zhuang, Yuan, Norton, Larry, Rosen, Neal, Hendrickson, Ronald C, Zhou, Xi Kathy, Iavarone, Antonio, Massague, Joan, Dannenberg, Andrew J, Lasorella, Anna, Benezra, Robert (May 2021) Anti-tumor effects of an ID antagonist with no observed acquired resistance. npj Breast Cancer, 7 (1). p. 58. ISSN 2374-4677

Wong, Willard, Brogi, Edi, Reis-Filho, Jorge S, Plitas, George, Robson, Mark, Norton, Larry, Morrow, Monica, Wen, Hannah Y (July 2021) Poor response to neoadjuvant chemotherapy in metaplastic breast carcinoma. npj Breast Cancer, 7 (1). p. 96. ISSN 2374-4677

Wortman, Juliana C, He, Ting-Fang, Solomon, Shawn, Zhang, Robert Z, Rosario, Anthony, Wang, Roger, Tu, Travis Y, Schmolze, Daniel, Yuan, Yuan, Yost, Susan E, Li, Xuefei, Levine, Herbert, Atwal, Gurinder, Lee, Peter P, Yu, Clare C (July 2021) Spatial distribution of B cells and lymphocyte clusters as a predictor of triple-negative breast cancer outcome. npj Breast Cancer, 7 (1). p. 84. ISSN 2374-4677

Wu, G. M., Feng, X., Stein, L. D. (May 2010) A human functional protein interaction network and its application to cancer data analysis. Genome Biology, 11 (5). ISSN 1474-760X

Xiang, B., Chatti, K., Qiu, H., Lakshmi, B., Krasnitz, A., Hicks, J. B., Yu, M., Miller, W. T., Muthuswamy, S. K. (August 2008) Brk is coamplified with ErbB2 to promote proliferation in breast cancer. Proc Natl Acad Sci U S A, 105 (34). pp. 12463-8.

Xue, B., Krishnamurthy, K., Allred, D. C., Muthuswamy, S. K. (December 2012) Loss of Par3 promotes breast cancer metastasis by compromising cell-cell cohesion. Nat Cell Biol. ISSN 1476-4679 (Electronic)1465-7392 (Linking)

Xue, B., Krishnamurthy, K., Allred, D. C., Muthuswamy, S. K. (2013) Loss of Par3 promotes breast cancer metastasis by compromising cell-cell cohesion. Nature Cell Biology, 15 (2). pp. 189-200. ISSN 1465-7392

Yu, C. C., Wortman, J. C., He, T. F., Solomon, S., Zhang, R. Z., Rosario, A., Wang, R., Tu, T., Schmolze, D., Yuan, Y., Yost, S. E., Li, X., Levine, H., Atwal, G., Lee, P. P. (November 2020) Physics Approaches to the Spatial Distribution of Immune Cells in Tumors. Rep Prog Phys. ISSN 0034-4885

Zahid, Huda, Buchholz, Caroline R, Singh, Manjulata, Ciccone, Michael F, Chan, Alice, Nithianantham, Stanley, Shi, Ke, Aihara, Hideki, Fischer, Marcus, Schönbrunn, Ernst, Dos Santos, Camila O, Landry, Joseph W, Pomerantz, William CK (September 2021) New Design Rules for Developing Potent Cell-Active Inhibitors of the Nucleosome Remodeling Factor (NURF) via BPTF Bromodomain Inhibition. Journal of Medicinal Chemistry. ISSN 0022-2623

Zhan, L., Xiang, B., Muthuswamy, S. K. (May 2006) Controlled activation of ErbB1/ErbB2 heterodimers promote invasion of three-dimensional organized epithelia in an ErbB1-dependent manner: implications for progression of ErbB2-overexpressing tumors. Cancer Res, 66 (10). pp. 5201-8. ISSN 0008-5472 (Print)

Zhang, S., Fan, G., Hao, Y., Hammell, M., Wilkinson, J. E., Tonks, N. K. (October 2017) Suppression of protein tyrosine phosphatase N23 predisposes to breast tumorigenesis via activation of FYN kinase. Genes Dev, 31 (19). pp. 1939-57. ISSN 0890-9369

Zhao, X., Powers, S. (August 2017) New Views into the Genetic Landscape of Metastatic Breast Cancer. Cancer Cell, 32 (2). pp. 131-133. ISSN 15356108

da Silva, Edaise M, Selenica, Pier, Vahdatinia, Mahsa, Pareja, Fresia, Da Cruz Paula, Arnaud, Ferrando, Lorenzo, Gazzo, Andrea M, Dopeso, Higinio, Ross, Dara S, Bakhteri, Ariya, Riaz, Nadeem, Chandarlapaty, Sarat, Razavi, Pedram, Norton, Larry, Wen, Hannah Y, Brogi, Edi, Weigelt, Britta, Zhang, Hong, Reis-Filho, Jorge S (April 2021) TERT promoter hotspot mutations and gene amplification in metaplastic breast cancer. npj Breast Cancer, 7 (1). p. 43. ISSN 2374-4677

van den Bruele, Astrid Botty, Sevilimedu, Varadan, Jochelson, Maxine, Formenti, Silvia, Norton, Larry, Sacchini, Virgilio (January 2022) Mobile mammography in New York City: analysis of 32,350 women utilizing a screening mammogram program. npj Breast Cancer, 8 (1). p. 14. ISSN 2374-4677

Book Section

Ewald, A., Werb, Z., Egeblad, M. (2009) Dynamic, Long-Term, In Vivo Imaging of Tumor-Stroma Interactions in Mouse Models of Breast Cancer Using Spinning-Disk Confocal Microscopy. In: Live Cell Imaging: A Laboratory Manual, Second Edition. Cold Spring Harbor Laboratory Press, New York, pp. 419-439. ISBN 9780879698935

Wortman, JC, He, TF, Rosario, A, Wang, R, Schmolze, D, Yuan, Y, Susan, SE, Li, X, Levine, H, Atwal, G, Lee, P, Yu, CC (January 2020) Occupancy and fractal dimension analyses of the spatial distribution of cytotoxic (CD8+) T cells infiltrating the tumor microenvironment in triple negative breast cancer. In: Physics Of Cancer, The: Research Advances. WORLD SCIENTIFIC, pp. 63-78. ISBN 9789811223495

Conference or Workshop Item

Abuhadra, Nour, Chen, Yuan, Plitas, George, Razavi, Pedram, Pareja, Fresia, Reis-Filho, Jorge S, Wen, Hannah Yong, Khan, Atif J, Traina, Tiffany A, Downs-Canner, Stephanie, Robson, Mark E, Norton, Larry, Montagna, Giacomo (2023) Prospective evaluation of pathologic response with neoadjuvant chemo-immunotherapy in metaplastic breast cancer. In: UNSPECIFIED.

Almeida, Ana S, Kees, Tim, Egeblad, Mikala (October 2015) Modulating innate-adaptive immune cell interactions to achieve tumor rejection. In: AACR Special Conference: Tumor Immunology and Immunotherapy: A New Chapter.

Bhaloo, Shirin, Gazzo, Andrea, Paula, Arnaud Da Cruz, da Silva, Edaise M, Selenica, Pier, Zhu, Yingjie, Blanco-Heredia, Juan, Pei, Xin, Patel, Juber, Wen, Hannah, Riaz, Nadeem, Powell, Simon, Chandarlapaty, Sarat, Norton, Larry, Brown, David, Weigelt, Britta, Pareja, Fresia, Reis-Filho, Jorge (2023) Whole-genome Sequencing Analysis of Metaplastic Breast Cancers Shows Infrequent Homologous Recombination Deficiency. In: 112th Annual Meeting of the United-States-and-Canadian-Academy-of-Pathology (USCAP), MAR 11-16, 2023, Mexico.

Feigman, Mary J, Moss, Matthew A, Chen, Chen, Cyrill, Samantha L, Ciccone, Michael, Trousdell, Marygrace, Yang, Shih Ting, Frey, Wesley D, Wilkinson, John E, dos Santos, Camila O (June 2020) Pregnancy reprograms the epigenome of mammary epithelial cells and blocks the development of premalignant mammary lesions in response to cMYC-overexpression. In: AACR Special Conference on the Evolving Landscape of Cancer Modeling.

Fein, Miriam R, Almeida, Ana S, Eberhardt, Anais, Egeblad, Mikala (January 2016) Cancer cell expression of CCR2 regulates the PD-L1/PD-1 immune checkpoint in breast cancer. In: CRI-CIMT-EATI-AACR Inaugural International Cancer Immunotherapy Conference: Translating Science into Survival.

Fein, Miriam R, He, Xue-Yan, Almeida, Ana S, Pommier, Arnaud, Bruzas, Emilis, Eberhardt, Anais, Wilkinson, John Erby, dos Santos, Camila, Egeblad, Mikala (May 2018) Targeting cancer cell CCR2 enhances synergistic immune surveillance in breast cancer. In: Functional Annotation of Animal Genomes (FAANG) ASAS-ISAG Joint Symposium.

Ferraro, Emanuela, Razavi, Pedram, Chandarlapaty, Sarat, Modi, Shanu, Wen, Hannah Yong, Brogi, Edi, Norton, Larry, Robson, Mark E, Dang, Chau T (May 2021) Change in HER2 status after neoadjuvant chemotherapy (NAC) with trastuzumab and pertuzumab (HP) in patients with HER2-positive early-stage breast cancer. In: American Society of Clinical Oncology.

Gholami, Sepideh, Chen, Chun-Hao, Lou, Emil, De Brot, Marina, Fujisawa, Sho, Chen, Nanhai G, Szalay, Aladar A, Fong, Yuman (September 2012) Vaccinia virus GLV-1h153 is effective in treating and preventing metastatic triple-negative breast cancer. In: 132nd ASA Annual Meeting.

He, Xue-Yan, Ng, David, Gao, Yuan, Michalopoulou, Evdokia, George, Shanu, Adrover, Jose M, Sun, Lijuan, Albrengues, Jean, Wan, Ledong, Han, Xiao, Vakoc, Christopher, Van Aelst, Linda, Egeblad, Mikala (2023) Untangling the connection between stress and metastatic breast cancer. In: American Association for Cancer Research Annual Meeting 2023, 2023 Apr 14-19, Orlando, FL.

Iyer, Shruti V, Kramer, Melissa, Goodwin, Sara, McCombie, W Richard (2022) Cas9 based targeted nanopore sequencing helps identify structural variants in breast cancer genes. In: Annual Meeting of the American-Association-for-Cancer-Research (AACR), APR 08-13, 2022, New Orleans, LA.

Iyer, Shruti V, Goodwin, Sara, Kramer, Melissa, McCombie, W Richard (August 2020) Understanding genetic variation in cancer using targeted nanopore long read sequencing. In: AACR Annual Meeting.

Kaur, Gagandeep, Selenica, Pier, Gazzo, Andrea, Cartagena, Lorraine Colon, Daaboul, Fayez, Dopeso, Higinio, da Silva, Edaise M, Ross, Dara, Zhang, Hong Amy, Wen, Hannah, Chandarlapaty, Sarat, Robson, Mark, Mandelker, Diana, Powell, Simon, Norton, Larry, Brogi, Edi, Reis-Filho, Jorge, Pareja, Fresia (2023) The Histologic and Genomic Features of Breast Cancers Harboring Genetic Alterations in RecQ DNA Helicases. In: 112th Annual Meeting of the United-States-and-Canadian-Academy-of-Pathology (USCAP), MAR 11-16, 2023, Mexico.

Khosravi, Pegah, Sutton, Elizabeth J, Jee, Justin, Dalfonso, Timothy, Fong, Christopher J, Rose, Doori, Da Silva, Edaise M, Kohli, Armaan, Ho, David Joon, Ahmed, Mehnaj S, Martinez, Danny, Begum, Anika, Zakszewski, Elizabeth, Aukerman, Andrew, Tazi, Yanis, Pinker-Domenig, Katja, Eskreis-Winkler, Sarah, Khan, Atif J, Brogi, Edi, Morris, Elizabeth, Chandarlapaty, Sarat, Plitas, George, Powell, Simon, Morrow, Monica, Norton, Larry, Gao, Jianjiong, Robson, Mark, Zhang, Hong, Shah, Sohrab, Razavi, Pedram (2022) Prediction of neoadjuvant treatment outcomes with multimodal data integration in breast cancer. In: American Association for Cancer Research Annual Meeting 2022, 2022 Apr 8-13, Philadelphia, PA.

Lei, Pin-Ji, Pereira, Ethel, Andersson, Patrik, Amoozgar, Zohreh, Van Wijnbergen, Jan Willem, O'Melia, Meghan J, Zhou, Hengbo, Chatterjee, Sampurna, Ho, William Wee, Posada, Jessica M, Kumar, Ashwin Srinivasan, Morita, Satoru, Chuang, Charlie, Ergin, Ilgin, Jones, Dennis, Huang, Peigen, Beyaz, Semir, Padera, Timothy P (2023) Single cell analysis of breast cancer progression and metastasis to lymph nodes reveals cancer cell plasticity and MHC class II-mediated immune regulation. In: 114th Annual Meeting of the American Association for Cancer Research (AACR), APR 14-19, 2023, Orlando, FL.

McArthur, Heather L, Comen, Elizabeth Anne, Bryce, Yolanda, Solomon, Stephen Barnett, Leal, Jorge Henrique S, Abaya, Christina DiLauro, Martinez, Cristal, Basho, Reva K, McAndrew, Philomena, Larkin, Brigid, Page, David B, Mellinger, Staci L, Fredrich, Nicole, Moxon, Nicole, Reddy, Sangeetha M, Carter, Meredith, Patil, Sujata, Dogan, Basak, Gatti-Mays, Margaret Elena, Norton, Larry (2023) A single-arm phase 2 study of peri-operative immune checkpoint inhibition and cryoablation in women with hormone receptor-negative, HER2-negative, early-stage/resectable breast cancer. In: UNSPECIFIED.

McArthur, Heather L, Comen, Elizabeth Anne, Bryce, Yolanda, Solomon, Stephen Barnett, Leal, Jorge Henrique S, Abaya, Christina DiLauro, Martinez, Cristal, Basho, Reva K, Park, Dorothy J, McAndrew, Philomena, Larkin, Brigid, Mills, William, Page, David B, Mellinger, Staci L, Fredrich, Nicole, Moxon, Nicole, Reddy, Sangeetha M, Carter, Meredith, Patil, Sujata, Norton, Larry (2022) A single-arm, phase 2 study of perioperative ipilimumab, nivolumab, and cryoablation in women with hormone receptor-negative, HER2-negative, early-stage/resectable breast cancer. In: Annual Meeting of the American-Society-of-Clinical-Oncology (ASCO), JUN 03-07, 2022.

Nattestad, Maria, Ng, Karen, Goodwin, Sara, Baslan, Timour, Sedlazeck, Fritz, Gurtowski, James, Hutton, Elizabeth, Sundaravadanam, Yogi, Garvin, Tyler, Alford, Marley, Tseng, Elizabeth, Rescheneder, Philipp, Chin, Jason, Beck, Timothy, Kramer, Melissa, McPherson, John, Hicks, James, Schatz, Michael C, McCombie, William R (2016) Comprehensive genome and transcriptome structural analysis of a breast cancer cell line using single molecule sequencing. In: Proceedings of the 107th Annual Meeting of the American Association for Cancer Research, 2016 Apr 16-20, New Orleans, LA.

Norton, Larry (October 2021) IS THE MAXIMUM TOLERATED DOSE (MDT) STILL THE OPTIMAL GOAL FOR CANCER DRUGS? In: UNSPECIFIED.

Park, Juwon, Qiu, Jing, Nakasone, Elizabeth S, Egeblad, Mikala (February 2013) Cancer cell-secreted CXCL1 chemokine acts on neutrophils to support metastasis. In: AACR Special Conference on Tumor Invasion and Metastasis.

Ren, Zuen, Liang, Huizhi, Dharmaratne, Malindrie, Morales-Gallego, Miriam, Fard, Atefeh Taherian, Mar, Jessica, Suyama, Kimita, Benard, Outhiriaradjou, Prystowsky, Michael B, Norton, Larry, Hazan, Rachel B (2022) Loss of glutathione peroxidase 2 promotes epithelial to mesenchymal transition and breast cancer metastasis. In: American Association for Cancer Research Annual Meeting 2022, 2022 Apr 8-13, Philadelphia, PA.

Rosenfeld, Jeffrey, Goodwin, Sara, Ganesan, Shridar (2017) The use of long-read sequencing to determine the structure of the Her2 amplicon in breast cancer. In: Proceedings of the American Association for Cancer Research Annual Meeting 2017, 2017 Apr 1-5, Washington, DC..

Safonov, Anton Mikhailovich, Bandlamudi, Chaitanya, Selenica, Pier, Marra, Antonio, Ferraro, Emanuela, Mandelker, Diana, Solit, David B, Berger, Michael F, Norton, Larry, Powell, Simon N, Shen, Ronglai, Robson, Mark E, Chandarlapaty, Sarat, Reis-Filho, Jorge S, Razavi, Pedram (2022) Allelic dosage of RB1 drives CDK4/6 inhibitor treatment resistance in metastatic breast cancer. In: Annual Meeting of the American-Society-of-Clinical-Oncology (ASCO), JUN 03-07, 2022.

Shen, Sherry, Solomon, Verna, Williams, Dominiq, Robson, Mark E, Norton, Larry, Traina, Tiffany A, Iyengar, Neil M (2023) The ARETHA study: A phase 2 randomized control trial of eribulin with evexomostat (SDX7320) or placebo for patients with metastatic triple-negative breast cancer (TNBC) and metabolic dysfunction. In: UNSPECIFIED.

Traina, TA, Theodoulou, M, Dugan, U, Feigin, K, Patil, S, Geneus, S, Godfrey, L, Norton, L, Hudis, C (2009) A novel capecitabine dosing schedule combined with bevacizumab is safe and active in patients with metastatic breast cancer: a phase II study. In: UNSPECIFIED.

Zhi, Iris, Lake, Diana E, Ehrich, Fiona, Chen, Yuan, Korc-Grodzicki, Beatriz, Norton, Larry, Robson, Mark E, Singh, Jasmeet Chadha (2023) Older patients with early-stage triple-negative breast cancer: The Memorial Sloan Kettering Cancer Center experience. In: UNSPECIFIED.

Thesis

Bružas, Emilis (August 2019) The Role Of Immunity In Breast Cancer Dormancy And Recurrence. PhD thesis, Cold Spring Harbor Laboratory.

Ebbesen, Saya H. (April 2013) RNAi Mouse Models of Breast Cancer Tumor Suppressor Genes. PhD thesis, Cold Spring Harbor Laboratory.

Hanasoge Somasundara, Amritha Varshini (November 2022) Investigating the role of changes to the mammary gland immune microenvironment in pregnancy-induced oncoprotection. PhD thesis, Cold Spring Harbor Laboratory.

Maiorino, L. (August 2019) Identification Of Cancer-Cell Intrinsic And Host-Mediated Cellular Mechanisms Of Metastasis Through Intravital Imaging. PhD thesis, Cold Spring Harbor Laboratory.

Nakasone, Elizabeth (March 2012) A Stromal CCL2/CCR2 Signaling Axis Regulates Chemotherapeutic Response in a Mouse Model of Breast Cancer. PhD thesis, Cold Spring Harbor Laboratory.

Wagenblast, E. (August 2014) A molecular characterization of breast cancer progression, including onset, tumor growth and metastasis. PhD thesis, Cold Spring Harbor Laboratory.

This list was generated on Thu Jul 25 03:51:23 2024 EDT.
CSHL HomeAbout CSHLResearchEducationNews & FeaturesCampus & Public EventsCareersGiving