Items where Year is 2025

Alexander, Katherine A, Yu, Ruofan, Skuli, Nicolas, Coffey, Nathan J, Nguyen, Son, Faunce, Christine L, Huang, Hua, Dardani, Ian P, Good, Austin L, Lim, Joan, Li, Catherine Y, Biddle, Nicholas, Joyce, Eric F, Raj, Arjun, Lee, Daniel, Keith, Brian, Simon, M Celeste, Berger, Shelley L (January 2025) Nuclear speckles regulate functional programs in cancer. Nature Cell Biology. ISSN 1465-7392 (Public Dataset)

Alsaloum, Matthew, Dib-Hajj, Sulayman D, Page, Dana A, Ruben, Peter C, Krainer, Adrian R, Waxman, Stephen G (February 2025) Voltage-gated sodium channels in excitable cells as drug targets. Nature Reviews Drug Discovery. ISSN 1474-1776

Altea-Manzano, Patricia, Decker-Farrell, Amanda, Janowitz, Tobias, Erez, Ayelet (January 2025) Metabolic interplays between the tumour and the host shape the tumour macroenvironment. Nature Reviews Cancer. ISSN 1474-175X

Garg, Ankur, On, Kin Fan, Xiao, Yang, Elkayam, Elad, Cifani, Paolo, David, Yael, Joshua-Tor, Leemor (January 2025) The molecular basis of Human FN3K mediated phosphorylation of glycated substrates. Nature Communications, 16 (1). p. 941. ISSN 2041-1723 (Public Dataset)

Goncalves, Marcus D, Dunne, Richard F, Moore, Amy C, Phillips, Wendy, Heymsfield, Steven B, Brown, Justin C, Talbert, Erin E, Janowitz, Tobias (January 2025) Call to Improve Coding of Cancer-Associated Cachexia. JCO Oncology Practice. OP2400781. ISSN 2688-1527

Hernandez, Diego E, Ciuparu, Andrei, Garcia da Silva, Pedro, Velasquez, Cristina M, Rebouillat, Benjamin, Gross, Michael D, Davis, Martin B, Chae, Honggoo, Muresan, Raul C, Albeanu, Dinu F (January 2025) Fast updating feedback from piriform cortex to the olfactory bulb relays multimodal identity and reward contingency signals during rule-reversal. Nature Communications, 16 (1). p. 937. ISSN 2041-1723 (Public Dataset)

Kaczmarzyk, Jakub, Sharma, Rishul, Koo, Peter, Saltz, Joel (January 2025) Reusable specimen-level inference in computational pathology. arXiv. ISSN 2331-8422 (Public Dataset) (Submitted)

Kang, Hyunook, Epstein, Max, Banke, Tue G, Perszyk, Riley, Simorowski, Noriko, Paladugu, Srinu, Liotta, Dennis C, Traynelis, Stephen F, Furukawa, Hiro (February 2025) Structural basis for channel gating and blockade in tri-heteromeric GluN1-2B-2D NMDA receptor. Neuron. ISSN 0896-6273

Lanctot, Amy, Hendelman, Anat, Udilovich, Peter, Robitaille, Gina M, Lippman, Zachary B (February 2025) Antagonizing cis-regulatory elements of a conserved flowering gene mediate developmental robustness. Proceedings of the National Academy of Sciences of the United States of America, 122 (8). e2421990122. ISSN 0027-8424

Langdon, Christopher, Engel, Tatiana A (February 2025) Latent circuit inference from heterogeneous neural responses during cognitive tasks. Nature Neuroscience. ISSN 1097-6256 (Public Dataset)

Liu, Hai-Jun, Liu, Jie, Zhai, Zhiwen, Dai, Mingqiu, Tian, Feng, Wu, Yongrui, Tang, Jihua, Lu, Yanli, Wang, Haiyang, Jackson, David, Yang, Xiaohong, Qin, Feng, Xu, Mingliang, Fernie, Alisdair R, Zhang, Zuxin, Yan, Jianbing (January 2025) Maize2035: A decadal vision for intelligent maize breeding. Molecular Plant. S1674-2052(25)00033. ISSN 1674-2052

Liu, Lingjie, Zhao, Yixin, Hassett, Rebecca, Toneyan, Shushan, Koo, Peter K, Siepel, Adam (February 2025) Probabilistic and machine-learning methods for predicting local rates of transcription elongation from nascent RNA sequencing data. Nucleic Acids Research (NAR), 53 (4). ISSN 1362-4962 (Public Dataset)

Medley, Jeffrey C, Perales, Roberto, Humada, Belén Gaete, Doerfel, Katja, Levine, Ariana, Panzade, Ganesh, Hammell, Christopher M, Zinovyeva, Anna (January 2025) LIN-67 functionally interacts with heterochronic miRNAs and regulates developmental timing in Caenorhabditis elegans. bioRxiv. ISSN 2692-8205 (Submitted)

Mitra, Partha, Jayakumar, Jaikishan, Sivaprakasam, Mohanasankar, Verma, Richa, Bota, Mihail, Joseph, Jayaraj, Mulay, Supriti, Kumutha, Jayaraman, Sriniva, Chitra, S, Suresh, S, Latha, Kumar, Harish, Bhaduri, Aparna, Nowakowski, Tomasz, Roy, Prasun, Savoia, Stephen, Bannerjee, Samik, Tward, Daniel (January 2025) A three-dimensional histological cell atlas of the developing human brain. Research Square. (Submitted)

Moresco, Philip, Kastan, Jonathan P, Yang, Jung-In, Prabakar, Rishvanth, Minicozzi, Francesca, Adams, Dexter W, Cifani, Paolo, Tuveson, David A, Fearon, Douglas T (January 2025) Signal peptide-independent secretion of keratin-19 by pancreatic cancer cells. bioRxiv. ISSN 2692-8205 (Submitted)

Reed, Laura K, Kleinschmit, Adam J, Buonaccorsi, Vincent, Hunt, Arthur G, Chalker, Douglas, Williams, Jason, Jones, Christopher J, Martinez-Cruzado, Juan-Carlos, Rosenwald, Anne (January 2025) A genomics learning framework for undergraduates. PLoS ONE, 20 (1). e0313124. ISSN 1932-6203

Robil, Janlo M, Straube, Henryk, Tran, Thu M (January 2025) A benzoxazinoid twist to boron homeostasis story in maize. Plant Physiology. kiaf007. ISSN 0032-0889

Ronemus, Michael, Bradford, Daniel, Laster, Zachary, Li, Siran (February 2025) Exploring genome-transcriptome correlations in cancer. Biochemical Society Transactions, 53 (1). ISSN 0300-5127

Sannigrahi, Achinta, De, Nayan, Bhunia, Debmalya, Bhadra, Jhuma (January 2025) Peptide nucleic acids: Recent advancements and future opportunities in biomedical applications. Bioorganic Chemistry, 155. p. 108146. ISSN 0045-2068

Stitzer, Michelle C, Seetharam, Arun S, Scheben, Armin, Hsu, Sheng-Kai, Schulz, Aimee J, AuBuchon-Elder, Taylor M, El-Walid, Mohamed, Ferebee, Taylor H, Hale, Charles O, La, Thuy, Liu, Zong-Yan, McMorrow, Sarah J, Minx, Patrick, Phillips, Alyssa R, Syring, Michael L, Wrightsman, Travis, Zhai, Jingjing, Pasquet, Rémy, McAllister, Christine A, Malcomber, Simon T, Traiperm, Paweena, Layton, Daniel J, Zhong, Jinshun, Costich, Denise E, Dawe, R Kelly, Fengler, Kevin, Harris, Charlotte, Irelan, Zach, Llaca, Victor, Parakkal, Praveena, Zastrow-Hayes, Gina, Woodhouse, Margaret R, Cannon, Ethalinda K, Portwood, John L, Andorf, Carson M, Albert, Patrice S, Birchler, James A, Siepel, Adam, Ross-Ibarra, Jeffrey, Romay, M Cinta, Kellogg, Elizabeth A, Buckler, Edward S, Hufford, Matthew B (January 2025) Extensive genome evolution distinguishes maize within a stable tribe of grasses. bioRxiv. ISSN 2692-8205 (Public Dataset) (Submitted)

Tajima, Yoko, Vargas, César DM, Ito, Keiichi, Wang, Wei, Luo, Ji-Dung, Xing, Jiawei, Kuru, Nurdan, Machado, Luiz Carlos, Siepel, Adam, Carroll, Thomas S, Jarvis, Erich D, Darnell, Robert B (February 2025) A humanized NOVA1 splicing factor alters mouse vocal communications. Nature Communications, 16 (1). p. 1542. ISSN 2041-1723 (Public Dataset)

Verma, Richa, Bota, Mihail, Ram, Keerthi, Jayakumar, Jaikishan, Folkerth, Rebecca, Pandurangan, Karthika, Ramesh, Jivitha Jyothi, Majumder, Moitrayee, Raveendran, Rakshika, Nanda, Reetuparna, K, Sivamani, S, Amal Dhivahar, Karthik, Srinivasa, Kumarasami, Ramdayalan, S, Suresh, Lata, S, Kumar, E Harish, Rangasami, Rajeswaran, Srinivasan, Chitra, Kumutha, Jayaraman, Vasudevan, Sudha, Bhat, Koushik, Sam C, Chrisline, Neelakantan, Sivathanu, Savoia, Stephen, Mitra, Partha P, Joseph, Jayaraj, Manger, Paul R, Sivaprakasam, Mohanasankar (February 2025) DHARANI: A 3D Developing Human-Brain Atlas Resource to Advance Neuroscience Internationally Integrated Multimodal Imaging and High-Resolution Histology of the Second Trimester. Journal of Comparative Neurology, 533 (2). e70006. ISSN 0021-9967 (Public Dataset)

Wang, Yuanting, Vakoc, Christopher R (February 2025) Sequential epigenetic therapy in AML. Blood, 145 (7). pp. 660-661. ISSN 0006-4971

Wang, Z, Vishwakarma, DS, Sun, S, Huang, Q, Pati, S, Johnson, RM, Rufrano, MR, Gembicky, M, Homer, JA, Moses, JE (January 2025) Phosphorus Fluoride Exchange (PFEx) Click Chemistry: 2-Substituted-Alkynyl-1-Cyclotriphosphazene (SACP) Hubs for Diversity Oriented Clicking. Advanced Synthesis and Catalysis. ISSN 1615-4150

Yu, Ruofan, Roseman, Shelby, Siegenfeld, Allison P, Gardner, Zachary, Nguyen, Son C, Tran, Khoa A, Joyce, Eric F, Jain, Rajan, Liau, Brian B, Krantz, Ian D, Alexander, Katherine A, Berger, Shelley L (February 2025) CTCF/RAD21 organize the ground state of chromatin-nuclear speckle association. Nature Structural & Molecular Biology. ISSN 1545-9993 (Public Dataset)