Items where Year is 2006
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Ramiro, A. R., Jankovic, M., Callen, E., Difilippantonio, S., Chen, H. T., McBride, K. M., Eisenreich, T. R., Chen, J., Dickins, R. A., Lowe, S. W., Nussenzweig, A., Nussenzweig, M. C. (March 2006) Role of genomic instability and p53 in AID-induced c-myc-Igh translocations. Nature, 440 (7080). pp. 105-109. ISSN 00280836
Akerman, C. J., Cline, H. T. (May 2006) Depolarizing GABAergic conductances regulate the balance of excitation to inhibition in the developing retinotectal circuit in vivo. J Neurosci, 26 (19). pp. 5117-30. ISSN 1529-2401 (Electronic)
Anderson, S. E., Keohan, M. L., D'Adamo, D. R., Maki, R. G. (2006) A retrospective analysis of vinorelbine chemotherapy for patients with previously treated soft-tissue sarcomas. Sarcoma, 2006. p. 15947. ISSN 1357-714X (Print)1357-714X (Linking)
Andl, T., Murchison, E. P., Liu, Fei, Zhang, Yi, Yunta-Gonzalez, M., Tobias, J. W., Andl, C. D., Seykora, J. T., Hannon, G. J., Millar, S. E. (May 2006) The miRNA-Processing Enzyme Dicer Is Essential for the Morphogenesis and Maintenance of Hair Follicles. Current Biology, 16 (10). pp. 1041-1049. ISSN 09609822
Aranda, V., Haire, T., Nolan, M. E., Calarco, J. P., Rosenberg, A. Z., Fawcett, J. P., Pawson, T., Muthuswamy, S. K. (November 2006) Par6-aPKC uncouples ErbB2 induced disruption of polarized epithelial organization from proliferation control. Nat Cell Biol, 8 (11). pp. 1235-45. ISSN 1465-7392 (Print)
Aravin, A. A., Gaidatzis, D., Pfeffer, S., Lagos-Quintana, M., Landgraf, P., Iovino, N., Morris, P., Brownstein, M. J., Kuramochi-Miyagawa, S., Nakano, T., Chien, M. C., Russo, J. J., Ju, J. Y., Sheridan, R., Sander, C., Zavolan, M. , Tuschl, T. (July 2006) A novel class of small RNAs bind to MILI protein in mouse testes. Nature, 442 (7099). pp. 203-7. ISSN 1476-4687 (Electronic)
Asari, H., Pearlmutter, B. A., Zador, A. M. (July 2006) Sparse representations for the cocktail party problem. Journal of Neuroscience, 26 (28). pp. 7477-7490. ISSN 02706474
Atwal, G. S. (May 2006) Clustering problems in biological networks. Journal of Classification, 23. pp. 349-352. ISSN 0176-4268 (print) 1432-1343 (Online)
Bejerano, G., Lowe, C. B., Ahituv, N., King, B., Siepel, A., Salama, S. R., Rubin, E. M., Kent, W. J., Haussler, D. (May 2006) A distal enhancer and an ultraconserved exon are derived from a novel retroposon. Nature, 441 (7089). pp. 87-90. ISSN 0028-0836
Bell, D. W., Sordella, R., Kwak, E. L., Godin-Heymann, N., Sharma, S. V., Sgroi, D. C., Sequist, L. V., Lynch, T. J., Settleman, J., Haber, D. A. (2006) Molecular targeted therapy of lung cancer. Tumor Biology, 27 (Suppl). ISSN 1010-4283
Berger, K. H., Kong, E. C., Dubnau, J., Tully, T., Moore, M. S., Heberlein, U. (June 2006) Ethanol-responsive behaviors & learning and memory-shared mechanisms? Alcoholism-Clinical and Experimental Research, 30 (6). 261A-261A. ISSN 0145-6008
Berman, E., Nicolaides, M., Maki, R. G., Fleisher, M., Chanel, S., Scheu, K., Wilson, B. A., Heller, G., Sauter, N. P. (May 2006) Altered bone and mineral metabolism in patients receiving imatinib mesylate. N Engl J Med, 354 (19). pp. 2006-13. ISSN 1533-4406 (Electronic)0028-4793 (Linking)
Bestman, J. E., Ewald, R. C., Chiu, S. L., Cline, H. T. (2006) In vivo single-cell electroporation for transfer of DNA and macromolecules. Nat Protoc, 1 (3). pp. 1267-72. ISSN 1750-2799 (Electronic)
Boddu, J., Jiang, C., Sangar, V., Olson, T., Peterson, T., Chopra, S. (January 2006) Comparative structural and functional characterization of sorghum and maize duplications containing orthologous Myb transcription regulators of 3-deoxyflavonoid biosynthesis. Plant Molecular Biology, 60 (2). pp. 185-199. ISSN 01674412
Boehm, J., Kang, M-G., Johnson, R. C., Esteban, J. A., Huganir, R. L., Malinow, R. (July 2006) Synaptic incorporation of AMPA receptors during LTP is controlled by a PKC phosphorylation site on GluR1. Neuron, 51 (2). pp. 213-25. ISSN 0896-6273 (Print)
Boehm, J. S., Ehrlich, I., Hsieh, H., Malinow, R. (September 2006) Two mutations preventing PDZ-protein interactions of GluR1 have opposite effects on synaptic plasticity. Learn Mem, 13 (5). pp. 562-5. ISSN 1072-0502 (Print)
Bokil, H. S., Pesaran, B., Andersen, R. A., Mitra, P. P. (August 2006) A method for detection and classification of events in neural activity. IEEE Trans Biomed Eng, 53 (8). pp. 1678-87. ISSN 0018-9294 (Print)
Bokil, H. S., Tchernichovsky, O., Mitra, P. P. (March 2006) Dynamic phenotypes: Time series analysis techniques for characterizing neuronal and behavioral dynamics. Neuroinformatics, 4 (1). pp. 119-128. ISSN 1539-2791
Bortiri, E., Chuck, G., Vollbrecht, E., Rocheford, T. R., Martienssen, R. A., Hake, S. (March 2006) ramosa2 encodes a LATERAL ORGAN BOUNDARY domain protein that determines the fate of stem cells in branch meristems of maize. Plant Cell, 18 (3). pp. 574-585. ISSN 10404651
Bortiri, E., Jackson, D. P., Hake, S. (April 2006) Advances in maize genomics: The emergence of positional cloning. Current Opinion in Plant Biology, 9 (2). pp. 164-171. ISSN 13695266
Brecht, M., Grinevich, V., Jin, T. E., Margrie, T., Osten, P. (December 2006) Cellular mechanisms of motor control in the vibrissal system. Pflügers Archiv - European Journal of Physiology, 453 (3). pp. 269-81. ISSN 0031-6768 (Print)
Brenner, M., Münch, J., Schindler, M., Wildum, S., Stolte, N., Stahl-Hennig, C., Fuchs, D., Mätz-Rensing, K., Franz, M., Heeney, J. L., Ten Haaft, P., Swigut, T., Hrecka, K., Skowronski, J., Kirchhoff, F. (May 2006) Importance of the N-distal AP-2 binding element in Nef for simian immunodeficiency virus replication and pathogenicity in rhesus macaques. Journal of Virology, 80 (9). pp. 4469-4481. ISSN 0022538X
Bureau, I., Shepherd, G., Svoboda, K. (December 2006) Defects in the developing cortical circuits of fmr1 mutant mice. International Journal of Developmental Neuroscience, 24 (8). p. 480. ISSN 0736-5748
Bureau, I., von Saint Paul, F., Svoboda, K. (December 2006) Interdigitated paralemniscal and lemniscal pathways in the mouse barrel cortex. PLoS Biology, 4 (12). pp. 2361-2371. ISSN 1544-9173
Canaran, P., Stein, L. D., Ware, D. H. (April 2006) Look-Align: an interactive web-based multiple sequence alignment viewer with polymorphism analysis support. Bioinformatics, 22 (7). pp. 885-6. ISSN 1367-4803 (Print)
Carroll, D. K., Carroll, J. S., Leong, C. O., Cheng, F., Brown, M., Mills, A. A., Brugge, J. S., Ellisen, L. W. (June 2006) p63 regulates an adhesion programme and cell survival in epithelial cells. Nature Cell Biology, 8 (6). pp. 551-561. ISSN 14657392
Carroll, J. S., Meyer, C. A., Song, J., Li, W., Geistlinger, T. R., Eeckhoute, J., Brodsky, A. S., Keeton, E. K., Fertuck, K. C., Hall, G. F., Wang, Q., Bekiranov, S., Sementchenko, V., Fox, E. A., Silver, P. A., Gingeras, T. R., Liu, X. S., Brown, M. (November 2006) Genome-wide analysis of estrogen receptor binding sites. Nature Genetics, 38 (11). pp. 1289-1297. ISSN 1061-4036
Cartegni, L., Hastings, M. L., Calarco, J. A., de Stanchina, E., Krainer, A. R. (January 2006) Determinants of exon 7 splicing in the spinal muscular atrophy genes, SMN1 and SMN2. Am J Hum Genet, 78 (1). pp. 63-77. ISSN 0002-9297 (Print)
Castellano, S., Macchi, F., Scali, M., Huang, Z. J., Bozzi, Y. (September 2006) Cytosolic branched chain aminotransferase (BCATc) mRNA is up-regulated in restricted brain areas of BDNF transgenic mice. Brain Research, 1108 (1). pp. 12-18. ISSN 00068993
Cetin, A., Komai, S., Eliava, M., Seeburg, P. H., Osten, P. (2006) Stereotaxic gene delivery in the rodent brain. Nature Protocols, 1 (6). ISSN 17542189 (ISSN)
Chang, K., Elledge, S. J., Hannon, G. J. (September 2006) Lessons from Nature: microRNA-based shRNA libraries. Nat Methods, 3 (9). pp. 707-14. ISSN 1548-7091 (Print)
Chen, B. L., Chklovskii, D. B. (April 2006) Placement and routing optimization in the brain. Proceedings of the 2006 international symposium on Physical design, 2006. pp. 136-141.
Chen, B. L., Hall, D. H., Chklovskii, D. B. (March 2006) Wiring optimization can relate neuronal structure and function. Proc Natl Acad Sci U S A, 103 (12). pp. 4723-8. ISSN 0027-8424 (Print)
Chen, N., Mah, A., Blacque, O. E., Chu, J., Phgora, K., Bakhoum, M. W., Newbury, C. R. Hunt, Khattra, J., Chan, S. W., Go, A., Efimenko, E., Johnsen, R. C., Phirke, P., Swoboda, P., Marra, M., Moerman, D. G., Leroux, M. R., Baillie, D. L., Stein, L. D. (December 2006) Identification of ciliary and ciliopathy genes in Caenorhabditis elegans through comparative genomics. Genome Biology, 7 (12). R126. ISSN 1474-760X
Chen, N., Stein, L. D. (May 2006) Conservation and functional significance of gene topology in the genome of Caenorhabditis elegans. Genome Res, 16 (5). pp. 606-17. ISSN 1088-9051 (Print)
Cheng, R., Juo, S. H., Loth, J. E., Nee, J., Iossifov, I., Blumenthal, R., Sharpe, L., Kanyas, K., Lerer, B., Lilliston, B., Smith, M., Trautman, K., Gilliam, T. C., Endicott, J., Baron, M. (March 2006) Genome-wide linkage scan in a large bipolar disorder sample from the National Institute of Mental Health genetics initiative suggests putative loci for bipolar disorder, psychosis, suicide, and panic disorder. Mol Psychiatry, 11 (3). pp. 252-60. ISSN 1359-4184 (Print)1359-4184 (Linking)
Collins, G. A., Tansey, W. P. (April 2006) The proteasome: a utility tool for transcription? Curr Opin Genet Dev, 16 (2). pp. 197-202. ISSN 0959-437X (Print)
Comméiras, Laurent, Moses, John E., Adlington, Robert M., Baldwin, Jack E., Cowley, Andrew R., Baker, Christopher M., Albrecht, Birgit, Grant, Guy H. (October 2006) Total synthesis of the epoxyquinol dimer (+)-panepophenanthrin: application of a diastereospecific biomimetic Diels–Alder dimerisation. Tetrahedron, 62 (42). pp. 9892-9901. ISSN 0040-4020
Connell, L. E., Helfman, D. M. (June 2006) Myosin light chain kinase plays a role in the regulation of epithelial cell survival. J Cell Sci, 119 (Pt 11). pp. 2269-81. ISSN 0021-9533 (Print)
Connelly, J. J., Yuan, P., Hsu, H. C., Li, Z., Xu, R. M., Sternglanz, R. (April 2006) Structure and function of the Saccharomyces cerevisiae Sir3 BAH domain. Mol Cell Biol, 26 (8). pp. 3256-65. ISSN 0270-7306 (Print)
Das, D , Nahlé, Z , Zhang, M. Q. (June 2006) Adaptively inferring human transcriptional subnetworks. Mol Syst Biol, 2. pp. 2006-2029. ISSN 1744-4292 (Electronic)
Das, R., Dimitrova, N., Xuan, Z. Y., Rollins, R. A., Haghighi, F., Edwards, J. R., Ju, J. Y., Bestor, T. H., Zhang, M. Q. (July 2006) Computational prediction of methylation status in human genomic sequences. Proc Natl Acad Sci U S A, 103 (28). pp. 10713-6. ISSN 0027-8424 (Print)
De Paola, V., Holtmaat, A. J. G. D., Knott, G. W., Song, S., Wilbrecht, L., Caroni, P., Svoboda, K. (March 2006) Cell type-specific structural plasticity of axonal branches and boutons in the adult neocortex. Neuron, 49 (6). pp. 861-75. ISSN 0896-6273 (Print)
DeWeese, M. R., Zador, A. M. (February 2006) Neurobiology: Efficiency measures. Nature, 439 (7079). pp. 920-921. ISSN 00280836
DeWeese, M. R., Zador, A. M. (November 2006) Non-Gaussian membrane potential dynamics imply sparse, synchronous activity in auditory cortex. J Neurosci, 26 (47). pp. 12206-18. ISSN 1529-2401 (Electronic)
Dickins, R. A., Premsrirut, P., McJunkin, K., Kim, S. Y., Hannon, G. J., Lowe, S. W. (2006) Tetracycline-regulated p53 knockdown in cells and transgenic mice. Toxicologic Pathology, 34 (7). p. 1006. ISSN 0192-6233
Ding, J. X., Feng, Y. J., Yao, L. Q., Yu, M., Jin, H. Y., Yin, L. H. (2006) The reinforcement of invasion in epithelial ovarian cancer cells by 17?-Estradiol is associated with up-regulation of Snail. Gynecologic Oncology, 103 (2). pp. 623-630. ISSN 00908258
Dobin, A Yu, Richter, HJ (May 2006) Domain Wall Assisted Magnetic Recording. (Submitted)
Emran, F., Florens, L., Ma, B., Swanson, S. K., Washburn, M. P., Hernandez, N. (August 2006) A role for Yin Yang-1 (YY1) in the assembly of snRNA transcription complexes. Gene, 377. pp. 96-108. ISSN 0378-1119 (Print)
Encinas, J. M., Vaahtokari, A., Enikolopov, G. N. (May 2006) Fluoxetine targets early progenitor cells in the adult brain. Proc Natl Acad Sci U S A, 103 (21). pp. 8233-8. ISSN 0027-8424 (Print)
Ende, G., Walter, S., Welzel, H., Demirakca, T., Wokrina, T., Ruf, M., Ulrich, M., Diehl, A., Henn, F. A., Mann, K. (August 2006) Alcohol consumption significantly influences the MR signal of frontal choline-containing compounds. Neuroimage, 32 (2). pp. 740-6. ISSN 1053-8119 (Print)1053-8119 (Linking)
Enemark, E. J., Joshua-Tor, L. (July 2006) Mechanism of DNA translocation in a replicative hexameric helicase. Nature, 442 (7100). pp. 270-275. ISSN 1476-4687 (Electronic) (Public Dataset)
Enikolopov, G. (June 2006) NO and neural stem cells. Nitric Oxide-Biology and Chemistry, 14 (4). A6-A7. ISSN 1089-8603
Ezhkova, E., Tansey, William P. (2006) Chromatin immunoprecipitation to study protein-DNA interactions in budding yeast. Methods in Molecular Biology, 313. pp. 225-44. ISSN 1940-6029 (Electronic)1064-3745 (Linking)
Fang, F., Fan, S., Zhang, X., Zhang, M. Q. (2006) Predicting methylation status of CpG islands in the human brain. Bioinformatics, 22 (18). pp. 2204-2209. ISSN 13674803
Feierstein, C. E. , Quirk, M. C., Uchida, N., Sosulski, D. L., Mainen, Z. F. (August 2006) Representation of spatial goals in rat orbitofrontal cortex. Neuron, 51 (4). pp. 495-507. ISSN 0896-6273 (Print)
Feng, Z., Jin, S., Zupnick, A., Hoh, J., De Stanchina, E., Lowe, S. W., Prives, C., Levine, A. J. (2006) p53 tumor suppressor protein regulates the levels of huntingtin gene expression. Oncogene, 25 (1). pp. 1-7. ISSN 09509232
Fesen, R. A., Hammell, M. C., Morse, J., Chevalier, R. A., Borkowski, K. J., Dopita, M. A., Gerardy, C. L., Lawrence, S. S., Raymond, J. C., van den Bergh, S. (January 2006) Discovery of outlying high-velocity oxygen-rich ejecta in Cassiopeia A. Astrophysical Journal, 636 (2). pp. 859-872. ISSN 0004-637X
Fesen, R. A., Hammell, M. C., Morse, J., Chevalier, R. A., Borkowski, K. J., Dopita, M. A., Gerardy, C. L., Lawrence, S. S., Raymond, J. C., van den Bergh, S. (July 2006) The expansion asymmetry and age of the Cassiopeia A supernova remnant. Astrophysical Journal, 645 (1). pp. 283-292. ISSN 0004-637X
Friml, Jiří, Benfey, Philip, Benková, Eva, Bennett, Malcolm, Berleth, Thomas, Geldner, Niko, Grebe, Markus, Heisler, Marcus, Hejátko, Jan, Jürgens, Gerd, Laux, Thomas, Lindsey, Keith, Lukowitz, Wolfgang, Luschnig, Christian, Offringa, Remko, Scheres, Ben, Swarup, Raanjan, Torres-Ruiz, Ramón, Weijers, Dolf, Zažímalová, Eva (2006) Apical-basal polarity: Why plant cells don't standon their heads. Trends in Plant Science, 11 (1). pp. 12-14. ISSN 13601385
Gadue, P., Huber, T. L., Paddison, P. J., Keller, G. M. (2006) Wnt and TGF-ß signaling are required for the induction of an in vitro model of primitive streak formation using embryonic stem cells. Proceedings of the National Academy of Sciences of the United States of America, 103 (45). pp. 16806-16811. ISSN 00278424
Gandhi, R., Gillespie, P. J., Hirano, T. (December 2006) Human Wapl Is a Cohesin-Binding Protein that Promotes Sister-Chromatid Resolution in Mitotic Prophase. Curr Biol, 16 (24). pp. 2406-17. ISSN 0960-9822 (Print)
Gao, M., Li, G., Potter, D., McCombie, W. R., Quiros, C. F. (2006) Comparative analysis of methylthioalkylmalate synthase (MAM) gene family and flanking DNA sequences in Brassica oleracea and Arabidopsis thaliana. Plant Cell Reports, 25 (6). pp. 592-598. ISSN 07217714
Garcia, D., Collier, S. A., Byrne, M. E., Martienssen, R. A. (May 2006) Specification of leaf polarity in Arabidopsis via the trans-acting siRNA pathway. Curr Biol, 16 (9). pp. 933-8. ISSN 0960-9822 (Print)
Geurts, A. M., Collier, L. S., Geurts, J. L., Oseth, L. L., Bell, M. L., Mu, David, Lucito, R., Godbout, S. A., Green, L. E., Lowe, S. W., Hirsch, B. A., Leinwand, L. A., Largaespada, D. A. (2006) Gene mutations and genomic rearrangements in the mouse as a result of transposon mobilization from chromosomal concatemers. PLoS Genetics, 2 (9). pp. 1413-1423. ISSN 15537390
Ghosh, S., Hirsch, H. A., Sekinger, E., Struhl, K., Gingeras, T. R. (October 2006) Rank-statistics based enrichment-site prediction algorithm developed for chromatin immunoprecipitation on chip experiments. BMC Bioinformatics, 7. ISSN 1471-2105
Gillis, J. A., Zhang, L., Skinner, F. K. (2006) Deficiencies in traditional measures of in vitro hippocampal rhythms. Neurocomputing, 69 (10-12). pp. 1385-1390. ISSN 09252312 (ISSN)
Gingeras, T. R. (2006) The multitasking genome. Nature Genetics, 38 (6). pp. 608-609. ISSN 10614036 (ISSN)
Girard, A., Sachidanandam, R., Hannon, G. J., Carmell, M. A. (2006) A germline-specific class of small RNAs binds mammalian Piwi proteins. Nature, 442 (7099). pp. 199-202. ISSN 00280836
Gogolla, N., Galimberti, I., DePaola, V., Caroni, P. (September 2006) Long-term live imaging of neuronal circuits in organotypic hippocampal slice cultures. Nature Protocols, 1 (3). pp. 1223-1226. ISSN 1745-2473
Gogolla, N., Galimberti, I., DePaola, V., Caroni, P. (2006) Preparation of organotypic hippocampal slice cultures for long-term live imaging. Nature Protocols, 1 (3). pp. 1165-1171. ISSN 1745-2473
Gogolla, N., Galimberti, I., DePaola, V., Caroni, P. (2006) Staining protocol for organotypic hippocampal slice cultures. Nat. Protocols, 1 (5). pp. 2452-2456.
Golding, M. C., Long, C. R., Carmell, M. A., Hannon, G. J., Westhusin, M. E. (April 2006) Suppression of prion protein in livestock by RNA interference. Proc Natl Acad Sci U S A, 103 (14). pp. 5285-90. ISSN 0027-8424 (Print)
Gracheva, E. O., Burdina, A. O., Holgado, A. M., Berthelot-Grosjean, M., Ackley, B. D., Hadwiger, G., Nonet, M. L., Weimer, R. M., Richmond, J. E. (2006) Tomosyn inhibits synaptic vesicle priming in Caenorhabditis elegans. PLoS Biology, 4 (8). pp. 1426-1437. ISSN 15457885
Gray, N. W., Weimer, R. M., Bureau, I., Svoboda, K. (November 2006) Rapid redistribution of synaptic PSD-95 in the neocortex in vivo. PLoS Biol, 4 (11). e370. ISSN 1545-7885 (Electronic)
Grubor, V. D., Troge, J. E., Meth, J. L., Lakshmi, B., Yamron, B., Hufnagel, L. A., Lee, Y. H., Kendall, J. T., Pai, D., Lee, A., Gregersen, P., Yancopoulos, S., Allen, S., Rai, K. R., Chiorazzi, N., Wigler, M. H., Esposito, D. (November 2006) Genome Analysis of CLL by Representational Oligonucleotide Microarray Analysis (ROMA). ASH Annual Meeting Abstracts, 108 (11). p. 2085.
Guigó, R., Flicek, P., Abril, J. F., Reymond, A., Lagarde, J., Denoeud, F., Antonarakis, S., Ashburner, M., Bajic, V. B., Birney, E., Castelo, R., Eyras, E., Ucla, C., Gingeras, T. R., Harrow, J., Hubbard, T., Lewis, S. E., Reese, M. G. (2006) EGASP: the human ENCODE Genome Annotation Assessment Project. Genome Biology, 7 Supp. S2.1-31. ISSN 14656914 (ISSN)
Guo, H. F., Zhong, Y. (April 2006) Requirement of Akt to mediate long-term synaptic depression in Drosophila. J Neurosci, 26 (15). pp. 4004-14. ISSN 1529-2401 (Electronic)
Gurden, H., Uchida, N., Mainen, Z. F. (October 2006) Sensory-evoked intrinsic optical signals in the olfactory bulb are coupled to glutamate release and uptake. Neuron, 52 (2). pp. 335-45. ISSN 0896-6273 (Print)
Haas, K., Li, J., Cline, H. T. (August 2006) AMPA receptors regulate experience-dependent dendritic arbor growth in vivo. PNAS, 103 (32). pp. 12127-12131.
Hannan, F., Ho, I., Tong, J. J., Zhu, Y., Nurnberg, P., Zhong, Y. (April 2006) Effect of neurofibromatosis type I mutations on a novel pathway for adenylyl cyclase activation requiring neurofibromin and Ras. Hum Mol Genet, 15 (7). pp. 1087-98. ISSN 0964-6906 (Print)
Hannon, G. J., Rivas, F. V., Murchison, E. P., Steitz, J. A. (2006) The Expanding Universe of Noncoding RNAs. Cold Spring Harb Symp Quant Biol, 71. pp. 551-564. ISSN 1943-4456 (Electronic) 0091-7451 (Linking)
Harris, T. W., Stein, L. D. (2006) WormBase: methods for data mining and comparative genomics. Methods Mol Biol, 351. pp. 31-50. ISSN 1940-6029 (Electronic)1064-3745 (Linking)
Hass-Jacobus, B. L., Futrell-Griggs, M., Abernathy, B., Westerman, R., Goicoechea, J. L., Stein, J., Klein, P., Hurwitz, B., Zhou, B., Rakhshan, F., Sanyal, A., Gill, N., Lin, J. Y., Walling, J. G., Luo, M. Z., Ammiraju, J. S. S., Kudrna, D., Kim, H. R., Ware, D., Wing, Rod A., San Miguel, P., Jackson, S. A. (2006) Integration of hybridization-based markers (overgos) into physical maps for comparative and evolutionary explorations in the genus Oryza and in Sorghum. BMC Genomics, 7. p. 199. ISSN 14712164
Hemann, M. T., Lowe, S. W. (August 2006) The p53-Bcl-2 connection. Cell Death Differ, 13 (8). pp. 1256-9. ISSN 1350-9047 (Print)
Henderson, M. J., Munoz, M. A., Saunders, D. N., Clancy, J. L., Russell, A. J., Williams, B., Pappin, D., Khanna, K. K., Jackson, S. P., Sutherland, R. L., Watts, C. K. (December 2006) EDD mediates DNA damage-induced activation of CHK2. J Biol Chem, 281 (52). pp. 39990-40000. ISSN 0021-9258 (Print)0021-9258 (Linking)
Herbert, M. R., Russo, J. P., Yang, S., Roohi, Jasmin, Blaxill, M., Kahler, S. G., Cremer, L., Hatchwell, Eli (2006) Autism and environmental genomics. NeuroToxicology, 27 (5). pp. 671-684. ISSN 0161813X
Hernando, E., Matushansky, I., Maki, R. G., Lowe, S. W., Cordon-Cardo, C. (2006) RNA interference against cancer associated genes. Annals of Oncology, 17 (Supp 9). p. 45. ISSN 0923-7534
Herz, A. V. M., Gollisch, T., Machens, C. K., Jaeger, D. (2006) Modeling single-neuron dynamics and computations: A balance of detail and abstraction. Science, 314 (5796). pp. 80-85. ISSN 00368075
Hicks, J. B., Krasnitz, A., Lakshmi, B., Navin, N. E., Riggs, M., Leibu, E., Esposito, D., Alexander, J., Troge, J. E., Grubor, V., Yoon, S., Wigler, M. H., Ye, K., Borresen-Dale, A. L., Naume, B., Schlicting, E., Norton, L., Hagerstrom, T., Skoog, L., Auer, G., Månér, S., Lundin, P., Zetterberg, A. (December 2006) Novel patterns of genome rearrangement and their association with survival in breast cancer. Genome Research, 16 (12). pp. 1465-79. ISSN 1088-9051
Hinrichs, A. S., Karolchik, D., Baertsch, R., Barber, G. P., Bejerano, G., Clawson, H., Diekhans, M., Furey, T. S., Harte, R. A., Hsu, F., Hillman-Jackson, J., Kuhn, R. M., Pedersen, J. S., Pohl, A., Raney, B. J., Rosenbloom, K. R., Siepel, A., Smith, K. E., Sugnet, C. W., Sultan-Qurraie, A., Thomas, D. J., Trumbower, H., Weber, R. J., Weirauch, M., Zweig, A. S., Haussler, D., Kent, W. J. (January 2006) The UCSC Genome Browser Database: update 2006. Nucleic Acids Res, 34 (Databa). D590-8. ISSN 0305-1048
Hirano, M., Hirano, T. (January 2006) Opening closed arms: long-distance activation of SMC ATPase by hinge-DNA interactions. Mol Cell, 21 (2). pp. 175-86. ISSN 1097-2765 (Print)
Hirano, T. (May 2006) At the heart of the chromosome: SMC proteins in action. Nat Rev Mol Cell Biol, 7 (5). pp. 311-22. ISSN 1471-0072 (Print)
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Willingham, A. T., Gingeras, T. R. (2006) TUF Love for "Junk" DNA. Cell, 125 (7). pp. 1215-1220. ISSN 00928674 (ISSN)
Wilson, R. I., Mainen, Z. F. (July 2006) Early events in olfactory processing. Annu Rev Neurosci, 29. pp. 163-201. ISSN 0147-006X (Print)
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Witkowski, J. A. (April 2006) The postgenomic era and complex disease. Pharmacogenomics, 7 (3). pp. 341-3. ISSN 1462-2416 (Print)
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Xiang, B., Muthuswamy, S. K. (2006) Using three-dimensional acinar structures for molecular and cell biological assays. Methods Enzymol, 406. pp. 692-701. ISSN 0076-6879 (Print)
Yang, A., Zhu, Z., Kapranov, P., McKeon, F., Church, G. M., Gingeras, T. R., Struhl, K. (2006) Relationships between p63 binding, DNA sequence, transcription activity, and biological function in human cells. Molecular Cell, 24 (4). pp. 593-602. ISSN 10972765 (ISSN)
Yang, L. V., Wan, J., Ge, Y., Fu, Z., Kim, S. Y., Fujiwara, Y., Taub, J. W., Matherly, L. H., Eliason, J., Li, L. (2006) The GATA site-dependent hemogen promoter is transcriptionally regulated by GATA1 in hematopoietic and leukemia cells. Leukemia, 20 (3). pp. 417-425. ISSN 08876924
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Zender, L., Spector, M. S., Xue, W., Flemming, P., Cordon-Cardo, C., Silke, J., Fan, S. T., Luk, J. M., Wigler, M. H., Hannon, G. J., Mu, D., Lucito, R., Powers, S., Lowe, S. W. (June 2006) Identification and validation of oncogenes in liver cancer using an integrative oncogenomic approach. Cell, 125 (7). pp. 1253-67. ISSN 0092-8674 (Print)
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Book Section
Alfonso, Yoselin Benitez, Cantrill, Laurence, Jackson, David (2006) Plasmodesmata: Cell-Cell Channels in Plants. In: Cell-Cell Channels. Springer New York, pp. 101-112. ISBN 978-0-387-36058-4
Kelly, T. J., Stillman, B. (2006) Duplication of DNA in eukaryotic cells. In: DNA replication and human disease. Cold Spring Harbor Monograph Series, 46 . Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, pp. 1-30. ISBN 0879697660
Siepel, Adam, Pollard, Katherine, Haussler, David (2006) New Methods for Detecting Lineage-Specific Selection. In: Research in Computational Molecular Biology. Lecture Notes in Computer Science, 3909 . Springer Berlin Heidelberg, pp. 190-205. ISBN 978-3-540-33295-4
Zhang, Z., Krainer, A. R. (2006) Nonsense-Mediated Alternative Splicing. In: Nonsense-mediated mRNA decay. Landes Bioscience, Georgetown, TX, pp. 250-359. ISBN 9781587062964
Monograph
Stillman, Bruce (2006) Annual Report. Project Report. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
Conference or Workshop Item
Andrews, P. , Saar, S., Wang, H., Valente, D., Serkhane, J., Tchernichovsky, O., Golani, I., Mitra, P. P. (October 2006) Multimedia signal processing for behavioral quantification in neuroscience. In: International Multimedia Conference: Proceedings of the 14th annual ACM international conference on Multimedia , Santa Barbara, CA.
Book
Spector, D. L., Godlman, R. D. (2006) Basic methods in microscopy : a laboratory manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.. ISBN 0879697474
Watson, J. D., Caudy, A. A., Myers, R. M., Witkowski, J. (2006) Recombinant DNA: Genes and Genomes -- a short course. W. H. Freeman & Co., New York. ISBN 9780716728665
Thesis
Cormier, C. (2006) Alternative Apoptotic Pathways in Cancer Cells. PhD thesis, Cold Spring Harbor Laboratory.
Ewald, R. C. (April 2006) NMDA receptor subtypes and dendritic arbor morphology. PhD thesis, Cold Spring Harbor Laboratory.
Kopec, C. D. (April 2006) AMPA Receptor Trafficking and their Effect on Spine Enlargement during Long-term Potentiation. PhD thesis, Cold Spring Harbor Laboratory.
Mangone, M. (March 2006) Analysis of the HCF-1 basic region and its role in sustaining cell proliferation. PhD thesis, Cold Spring Harbor Laboratory.
Dataset
Hicks, J. B. (2006) Data file sw.dip.amps.txt for deletions. [Dataset] (Unpublished)