Items where Year is 2019

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Number of items: 347.

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Abdeladim, L., Matho, K. S., Clavreul, S., Mahou, P., Sintes, J. M., Solinas, X., Arganda-Carreras, I., Turney, S. G., Lichtman, J. W., Chessel, A., Bemelmans, A. P., Loulier, K., Supatto, W., Livet, J., Beaurepaire, E. (April 2019) Multicolor multiscale brain imaging with chromatic multiphoton serial microscopy. Nat Commun, 10 (1). p. 1662. ISSN 2041-1723

Abdeladim, L., Matho, K. S., Clavreul, S., Mahou, P., Sintes, J. M., Solinas, X., Arganda-Carreras, I., Turney, S. G., Lichtman, J. W., Chessel, A., Bemelmans, A. P., Loulier, K., Supatto, W., Livet, J., Beaurepaire, E. (May 2019) Publisher Correction: Multicolor multiscale brain imaging with chromatic multiphoton serial microscopy. Nat Commun, 10 (1). p. 2160. ISSN 2041-1723

Abulwerdi, F. A., Xu, W., Ageeli, A. A., Yonkunas, M. J., Arun, G., Nam, H., Schneekloth, J. S., Dayie, T. K., Spector, D., Baird, N., Le Grice, S. F. J. (February 2019) Selective Small-Molecule Targeting of a Triple Helix Encoded by the Long Noncoding RNA, MALAT1. ACS Chemical Biology, 14 (2). pp. 223-235. ISSN 15548929 (ISSN) (Public Dataset)

Aganezov, S., Zban, I., Aksenov, V., Alexeev, N., Schatz, M. C. (December 2019) Recovering rearranged cancer chromosomes from karyotype graphs. BMC Bioinformatics, 20 (Suppl). p. 641. ISSN 1471-2105 (Public Dataset)

Aho, E. R., Wang, J., Gogliotti, R. D., Howard, G. C., Phan, J., Acharya, P., Macdonald, J. D., Cheng, K., Lorey, S. L., Lu, B., Wenzel, S., Foshage, A. M., Alvarado, J., Wang, F., Shaw, J. G., Zhao, B., Weissmiller, A. M., Thomas, L. R., Vakoc, C. R., Hall, M. D., Hiebert, S. W., Liu, Q., Stauffer, S. R., Fesik, S. W., Tansey, W. P. (March 2019) Displacement of WDR5 from Chromatin by a WIN Site Inhibitor with Picomolar Affinity. Cell Reports, 26 (11). 2916-2928.e13. ISSN 22111247 (ISSN)

Alexander, Katherine A, García-García, María J (January 2019) Imprinted gene expression at the Dlk1-Dio3 cluster is controlled by both maternal and paternal IG-DMRs in a tissue-specific fashion. bioRxiv. (Submitted)

Alonge, M., Schatz, M. C. (March 2019) A master regulator of regeneration. Science, 363 (6432). pp. 1152-1153. ISSN 0036-8075

Alonge, M., Soyk, S., Ramakrishnan, S., Wang, X., Goodwin, S., Sedlazeck, F. J., Lippman, Z. B., Schatz, M. C. (October 2019) RaGOO: fast and accurate reference-guided scaffolding of draft genomes. Genome Biol, 20 (1). p. 224. ISSN 1474-7596 (Public Dataset)

Anaparthy, N., Ho, Y. J., Martelotto, L., Hammell, M., Hicks, J. (January 2019) Single-Cell Applications of Next-Generation Sequencing. Cold Spring Harb Perspect Med, 9 (10). ISSN 2157-1422

Ando, Y., Elkayam, E., McPherson, R. L., Dasovich, M., Cheng, S. J., Voorneveld, J., Filippov, D. V., Ong, S. E., Joshua-Tor, L., Leung, A. K. L. (January 2019) ELTA: Enzymatic Labeling of Terminal ADP-Ribose. Mol Cell, 73 (4). 845-856 e5. ISSN 1097-2765

Antao, Noelle V, Marcet-Ortega, Marina, Cifani, Paolo, Kentsis, Alex, Foley, Emily A (September 2019) A Cancer-Associated Missense Mutation in PP2A-Aα Increases Centrosome Clustering during Mitosis. iScience, 19. pp. 74-82. ISSN 2589-0042

Antonyak, M. A., Lukey, M. J., Cerione, R. A. (March 2019) Lipid-filled vesicles modulate macrophages. Science, 363 (6430). pp. 931-932. ISSN 1095-9203

Arrazola, M. S., Saquel, C., Catalan, R. J., Barrientos, S. A., Hernandez, D. E., Catenaccio, A., Court, F. A. (May 2019) Axonal degeneration is mediated by necroptosis activation Necroptosis mediates axonal degeneration. J Neurosci, 39 (20). pp. 3832-2844. ISSN 0270-6474

Arun, G., Spector, D. L. (March 2019) MALAT1 Long Non-Coding RNA and Breast Cancer. RNA Biol, 16 (6). pp. 860-863. ISSN 1547-6286

Asp, M., Giacomello, S., Larsson, L., Wu, C., Furth, D., Qian, X., Wardell, E., Custodio, J., Reimegard, J., Salmen, F., Osterholm, C., Stahl, P. L., Sundstrom, E., Akesson, E., Bergmann, O., Bienko, M., Mansson-Broberg, A., Nilsson, M., Sylven, C., Lundeberg, J. (December 2019) A Spatiotemporal Organ-Wide Gene Expression and Cell Atlas of the Developing Human Heart. Cell, 179 (7). 1647-1660.e19. ISSN 0092-8674

Azevedo, H., Ferreira, M., Mascarello, A., Osten, P., Werneck Guimaraes, C. R. (December 2019) The serotonergic and alpha-1 adrenergic receptor modulator ACH-000029 ameliorates anxiety-like behavior in a post-traumatic stress disorder model. Neuropharmacology, 164. p. 107912. ISSN 0028-3908

Baker, L. A., Tiriac, H., Tuveson, D. A. (2019) Generation and Culture of Human Pancreatic Ductal Adenocarcinoma Organoids from Resected Tumor Specimens. Methods Mol Biol, 1882. pp. 97-115. ISSN 1064-3745

Baker, L. A., Tuveson, D. A. (2019) Generation and Culture of Tumor and Metastatic Organoids from Murine Models of Pancreatic Ductal Adenocarcinoma. Methods Mol Biol, 1882. pp. 117-133. ISSN 1064-3745

Ballouz, S., Dobin, A., Gillis, J. A. (August 2019) Is it time to change the reference genome? Genome Biol, 20 (1). ISSN 1474-7596

Ballouz, Sara, Dobin, Alexander, Gillis, Jesse (January 2019) Is it time to change the reference genome? BioRxiv. (Unpublished)

Banerjee, Arkarup, Phelps, Steven M, Long, Michael A (March 2019) Singing Mice. Current Biology, 29 (6). R190-R191. ISSN 0960-9822

Barnes, S. L., Belliveau, N. M., Ireland, W. T., Kinney, J. B., Phillips, R. (February 2019) Mapping DNA sequence to transcription factor binding energy in vivo. PLoS Comput Biol, 15 (2). e1006226. ISSN 1553-734x

Barrow, A. S., Smedley, C. J., Zheng, Q., Li, S., Dong, J., Moses, J. E. (August 2019) The growing applications of SuFEx click chemistry. Chem Soc Rev, 48 (17). pp. 4731-4758. ISSN 0306-0012

Bell, C. C., Fennell, K. A., Chan, Y. C., Rambow, F., Yeung, M. M., Vassiliadis, D., Lara, L., Yeh, P., Martelotto, L. G., Rogiers, A., Kremer, B. E., Barbash, O., Mohammad, H. P., Johanson, T. M., Burr, M. L., Dhar, A., Karpinich, N., Tian, L., Tyler, D. S., MacPherson, L., Shi, J., Pinnawala, N., Yew Fong, C., Papenfuss, A. T., Grimmond, S. M., Dawson, S. J., Allan, R. S., Kruger, R. G., Vakoc, C. R., Goode, D. L., Naik, S. H., Gilan, O., Lam, E. Y. N., Marine, J. C., Prinjha, R. K., Dawson, M. A. (June 2019) Targeting enhancer switching overcomes non-genetic drug resistance in acute myeloid leukaemia. Nat Commun, 10 (1). p. 2723. ISSN 2041-1723

Bennett, C. F., Krainer, A. R., Cleveland, D. W. (July 2019) Antisense Oligonucleotide Therapies for Neurodegenerative Diseases. Annu Rev Neurosci, 42. pp. 385-406. ISSN 0147-006x

Benoit, M., Drost, H. G., Catoni, M., Gouil, Q., Lopez-Gomollon, S., Baulcombe, D., Paszkowski, J. (September 2019) Environmental and epigenetic regulation of Rider retrotransposons in tomato. PLoS Genet, 15 (9). e1008370. ISSN 1553-7390

Berlow, N. E., Rikhi, R., Geltzeiler, M., Abraham, J., Svalina, M. N., Davis, L. E., Wise, E., Mancini, M., Noujaim, J., Mansoor, A., Quist, M. J., Matlock, K. L., Goros, M. W., Hernandez, B. S., Doung, Y. C., Thway, K., Tsukahara, T., Nishio, J., Huang, E. T., Airhart, S., Bult, C. J., Gandour-Edwards, R., Maki, R. G., Jones, R. L., Michalek, J. E., Milovancev, M., Ghosh, S., Pal, R., Keller, C. (June 2019) Probabilistic modeling of personalized drug combinations from integrated chemical screen and molecular data in sarcoma. BMC Cancer, 19 (1). p. 593. ISSN 1471-2407 (Public Dataset)

Bharathy, N., Berlow, N. E., Wang, E., Abraham, J., Settelmeyer, T. P., Hooper, J. E., Svalina, M. N., Bajwa, Z., Goros, M. W., Hernandez, B. S., Wolff, J. E., Pal, R., Davies, A. M., Ashok, A., Bushby, D., Mancini, M., Noakes, C., Goodwin, N. C., Ordentlich, P., Keck, J., Hawkins, D. S., Rudzinski, E. R., Mansoor, A., Perkins, T. J., Vakoc, C. R., Michalek, J. E., Keller, C. (May 2019) Preclinical rationale for entinostat in embryonal rhabdomyosarcoma. Skelet Muscle, 9 (1). p. 12. ISSN 2044-5040

Bhargava, V., Goldstein, C. D., Russell, L., Xu, L., Ahmed, M., Li, W., Casey, A., Servage, K., Kollipara, R., Picciarelli, Z., Kittler, R., Yatsenko, A., Carmell, M., Orth, K., Amatruda, J. F., Yanowitz, J. L., Buszczak, M. (December 2019) GCNA Preserves Genome Integrity and Fertility Across Species. Dev Cell, 52 (1). pp. 38-52. ISSN 1534-5807 (Public Dataset)

Bhattacharjee, S., Roche, B., Martienssen, R. A. (June 2019) RNA-induced initiation of transcriptional silencing (RITS) complex structure and function. RNA Biol, 16 (9). pp. 1133-1146. ISSN 1547-6286

Biffi, G., Tuveson, D. A. (May 2019) A FATal Combination: Fibroblast-Derived Lipids and Cancer-Derived Autotaxin Promote Pancreatic Cancer Growth. Cancer Discov, 9 (5). pp. 578-580. ISSN 2159-8274

Blay, J. Y., Schoffski, P., Bauer, S., Krarup-Hansen, A., Benson, C., D'Adamo, D. R., Jia, Y., Maki, R. G. (May 2019) Eribulin versus dacarbazine in patients with leiomyosarcoma: subgroup analysis from a phase 3, open-label, randomised study. Br J Cancer, 120 (11). pp. 1026-1032. ISSN 0007-0920

Blumberg, Amit, Zhao, Yixin, Huang, Yi-Fei, Dukler, Noah, Rice, Edward, Chivu, Alexandra, Krumholz, Katie, Danko, Charles, Siepel, Adam (July 2019) Characterizing RNA stability genome-wide through combined analysis of PRO-seq and RNA-seq data. BioRxiv. (Unpublished)

Bodkin, J. A., Coleman, M. J., Godfrey, L. J., Carvalho, C. M. B., Morgan, C. J., Suckow, R. F., Anderson, T., Ongur, D., Kaufman, M. J., Lewandowski, K. E., Siegel, A. J., Waldstreicher, E., Grochowski, C. M., Javitt, D. C., Rujescu, D., Hebbring, S., Weinshilboum, R., Rodriguez, S. B., Kirchhoff, C., Visscher, T., Vuckovic, A., Fialkowski, A., McCarthy, S., Malhotra, D., Sebat, J., Goff, D. C., Hudson, J. I., Lupski, J. R., Coyle, J. T., Rudolph, U., Levy, D. L. (May 2019) Targeted Treatment of Individuals With Psychosis Carrying a Copy Number Variant Containing a Genomic Triplication of the Glycine Decarboxylase Gene. Biol Psychiatry, 86 (7). pp. 523-535. ISSN 0006-3223

Borniger, J. C. (2019) Central regulation of breast cancer growth and metastasis. J Cancer Metastasis Treat, 5. ISSN 2394-4722

Bott, A. J., Shen, J., Tonelli, C., Zhan, L., Sivaram, N., Jiang, Y. P., Yu, X., Bhatt, V., Chiles, E., Zhong, H., Maimouni, S., Dai, W., Velasquez, S., Pan, J. A., Muthalagu, N., Morton, J., Anthony, T. G., Feng, H., Lamers, W. H., Murphy, D. J., Guo, J. Y., Jin, J., Crawford, H. C., Zhang, L., White, E., Lin, R. Z., Su, X., Tuveson, D. A., Zong, W. X. (October 2019) Glutamine Anabolism Plays a Critical Role in Pancreatic Cancer by Coupling Carbon and Nitrogen Metabolism. Cell Rep, 29 (5). 1287-1298.e6.

Bottcher, J., Dilworth, D., Reiser, U., Neumuller, R. A., Schleicher, M., Petronczki, M., Zeeb, M., Mischerikow, N., Allali-Hassani, A., Szewczyk, M. M., Li, F., Kennedy, S., Vedadi, M., Barsyte-Lovejoy, D., Brown, P. J., Huber, K. V. M., Rogers, C. M., Wells, C. I., Fedorov, O., Rumpel, K., Zoephel, A., Mayer, M., Wunberg, T., Bose, D., Zahn, S., Arnhof, H., Berger, H., Reiser, C., Hormann, A., Krammer, T., Corcokovic, M., Sharps, B., Winkler, S., Haring, D., Cockcroft, X. L., Fuchs, J. E., Mullauer, B., Weiss-Puxbaum, A., Gerstberger, T., Boehmelt, G., Vakoc, C. R., Arrowsmith, C. H., Pearson, M., McConnell, D. B. (July 2019) Fragment-based discovery of a chemical probe for the PWWP1 domain of NSD3. Nat Chem Biol, 15 (8). pp. 822-829. ISSN 1552-4450

Breuss, M. W., Antaki, D., George, R. D., Kleiber, M., James, K. N., Ball, L. L., Hong, O., Mitra, I., Yang, X., Wirth, S. A., Gu, J., Garcia, C. A. B., Gujral, M., Brandler, W. M., Musaev, D., Nguyen, A., McEvoy-Venneri, J., Knox, R., Sticca, E., Botello, M. C. C., Uribe Fenner, J., Perez, M. C., Arranz, M., Moffitt, A. B., Wang, Z., Hervas, A., Devinsky, O., Gymrek, M., Sebat, J., Gleeson, J. G. (December 2019) Autism risk in offspring can be assessed through quantification of male sperm mosaicism. Nat Med, 26 (1). pp. 143-150. ISSN 1078-8956

Brown, Peter, RELISH Consortium, Zhou, Yaoqi (January 2019) Large expert-curated database for benchmarking document similarity detection in biomedical literature search. Database: the journal of biological databases and curation, 2019. pp. 1-67. ISSN 1758-0463

Caiado, F., Maia-Silva, D., Jardim, C., Schmolka, N., Carvalho, T., Reforco, C., Faria, R., Kolundzija, B., Simoes, A. E., Baubec, T., Vakoc, C. R., da Silva, M. G., Manz, M. G., Schumacher, T. N., Norell, H., Silva-Santos, B. (November 2019) Lineage tracing of acute myeloid leukemia reveals the impact of hypomethylating agents on chemoresistance selection. Nat Commun, 10 (1). p. 4986. ISSN 2041-1723

Carbonetti, G., Converso, C., Clement, T., Wang, C., Trotman, L., Ojima, I., Kaczocha, M. (October 2019) Docetaxel/cabazitaxel and fatty acid binding protein 5 inhibitors produce synergistic inhibition of prostate cancer growth. Prostate. ISSN 0270-4137

Carter, J. A., Gilbo, P., Atwal, G. S. (December 2019) IMPRES does not reproducibly predict response to immune checkpoint blockade therapy in metastatic melanoma. Nat Med, 25 (12). pp. 1833-1835. ISSN 1078-8956 (Public Dataset)

Carter, J. A., Preall, J. B., Atwal, G. S. (October 2019) Bayesian Inference of Allelic Inclusion Rates in the Human T Cell Receptor Repertoire. Cell Syst, 9 (5). pp. 475-482. ISSN 2405-4712 (Public Dataset)

Carter, J. A., Preall, J. B., Grigaityte, K., Goldfless, S. J., Jeffery, E., Briggs, A. W., Vigneault, F., Atwal, G. S. (July 2019) Single T Cell Sequencing Demonstrates the Functional Role alpha beta TCR Pairing in Cell Lineage and Antigen Specificity. Frontiers in Immunology, 10. Article Number:1516. ISSN 1664-3224

Catizone, Allison N, Good, Charly Ryan, Alexander, Katherine A, Berger, Shelley L, Sammons, Morgan A (April 2019) Comparison of genotoxic versus nongenotoxic stabilization of p53 provides insight into parallel stress-responsive transcriptional networks. Cell Cycle, 18 (8). pp. 809-823. ISSN 1538-4101

Chae, H., Kepple, D. R., Bast, W. G., Murthy, V. N., Koulakov, A. A., Albeanu, D. F. (August 2019) Mosaic representations of odors in the input and output layers of the mouse olfactory bulb. Nat Neurosci, 22 (8). 1306-1317.. ISSN 1097-6256 (Public Dataset)

Chan, K., Robert, F., Oertlin, C., Kapeller-Libermann, D., Avizonis, D., Gutierrez, J., Handly-Santana, A., Doubrovin, M., Park, J., Schoepfer, C., Da Silva, B., Yao, M., Gorton, F., Shi, J., Thomas, C. J., Brown, L. E., Porco, J. A., Pollak, M., Larsson, O., Pelletier, J., Chio, I. I. C. (November 2019) eIF4A supports an oncogenic translation program in pancreatic ductal adenocarcinoma. Nat Commun, 10 (1). p. 5151. ISSN 2041-1723

Chandrasekhar, A., Navlakha, S. (May 2019) Neural arbors are Pareto optimal. Proc Biol Sci, 286 (1902). p. 20182727. ISSN 0962-8452 (Public Dataset)

Chen, J. P., Jiao, Y. P., Laza, H., Payton, P., Ware, D., Xin, Z. G. (November 2019) Identification of the First Nuclear Male Sterility Gene (Male-sterile 9) in Sorghum. Plant Genome, 12 (3). Article No 190020. ISSN 1940-3372

Chen, S., Krusche, P., Dolzhenko, E., Sherman, R. M., Petrovski, R., Schlesinger, F., Kirsche, M., Bentley, D. R., Schatz, M. C., Sedlazeck, F. J., Eberle, M. A. (December 2019) Paragraph: A graph-based structural variant genotyper for short-read sequence data. Genome Biology, 20 (1). Article 291. ISSN 14747596 (ISSN)

Chen, X., Sun, Y. C., Zhan, H., Kebschull, J. M., Fischer, S., Matho, K., Huang, Z. J., Gillis, J., Zador, A. M. (October 2019) High-Throughput Mapping of Long-Range Neuronal Projection Using In Situ Sequencing. Cell, 179 (3). 772-786.e19. ISSN 0092-8674 (Public Dataset)

Chen, Y., McElvain, L. E., Tolpygo, A. S., Ferrante, D., Friedman, B., Mitra, P. P., Karten, H. J., Freund, Y., Kleinfeld, D. (March 2019) An active texture-based digital atlas enables automated mapping of structures and markers across brains. Nat Methods, 16 (4). pp. 341-350. ISSN 1548-7091

Chen, Xiaoyin, Sun, Yu-Chi, Zhan, Huiqing, Kebschull, Justus, Fischer, Stephan, Matho, Katherine, Josh Huang, Z, Gillis, Jesse, Zador, Anthony (July 2019) High-throughput mapping of long-range neuronal projection using <i>in situ</i> sequencing. BioRxiv. (Unpublished)

Cheng, H., Capponi, S., Wakeling, E., Marchi, E., Li, Q., Zhao, M., Weng, C., Stefan, P. G., Ahlfors, H., Kleyner, R., Rope, A., Lumaka, A., Lukusa, P., Devriendt, K., Vermeesch, J., Posey, J. E., Palmer, E. E., Murray, L., Leon, E., Diaz, J., Worgan, L., Mallawaarachchi, A., Vogt, J., de Munnik, S. A., Dreyer, L., Baynam, G., Ewans, L., Stark, Z., Lunke, S., Goncalves, A. R., Soares, G., Oliveira, J., Fassi, E., Willing, M., Waugh, J. L., Faivre, L., Riviere, J. B., Moutton, S., Mohammed, S., Payne, K., Walsh, L., Begtrup, A., Guillen Sacoto, M. J., Douglas, G., Alexander, N., Buckley, M. F., Mark, P. R., Ades, L. C., Sandaradura, S. A., Lupski, J. R., Roscioli, T., Agrawal, P. B., Kline, A. D., Wang, K., Timmers, H. T. M., Lyon, G. J. (October 2019) Missense variants in TAF1 and developmental phenotypes: challenges of determining pathogenicity. Hum Mutat. ISSN 1059-7794

Cheng, H., Gottlieb, L., Marchi, E., Kleyner, R., Bhardwaj, P., Rope, A. F., Rosenheck, S., Moutton, S., Philippe, C., Eyaid, W., Alkuraya, F. S., Toribio, J., Mena, R., Prada, C. E., Stessman, H., Bernier, R., Wermuth, M., Kauffmann, B., Blaumeiser, B., Kooy, R. F., Baralle, D., Mancini, G. M. S., Conway, S. J., Xia, F., Chen, Z., Meng, L., Mihajlovic, L., Marmorstein, R., Lyon, G. J. (May 2019) Phenotypic and biochemical analysis of an international cohort of individuals with variants in NAA10 and NAA15. Hum Mol Genet, 28 (17). pp. 2900-2919. ISSN 0964-6906

Claeys, H., Vi, S. L., Xu, X., Satoh-Nagasawa, N., Eveland, A. L., Goldshmidt, A., Feil, R., Beggs, G. A., Sakai, H., Brennan, R. G., Lunn, J. E., Jackson, D. (April 2019) Control of meristem determinacy by trehalose 6-phosphate phosphatases is uncoupled from enzymatic activity. Nat Plants, 5 (4). pp. 352-357. ISSN 2055-0278

Clarke, D. J. B., Wang, L., Jones, A., Wojciechowicz, M. L., Torre, D., Jagodnik, K. M., Jenkins, S. L., McQuilton, P., Flamholz, Z., Silverstein, M. C., Schilder, B. M., Robasky, K., Castillo, C., Idaszak, R., Ahalt, S. C., Williams, J., Schurer, S., Cooper, D. J., de Miranda Azevedo, R., Klenk, J. A., Haendel, M. A., Nedzel, J., Avillach, P., Shimoyama, M. E., Harris, R. M., Gamble, M., Poten, R., Charbonneau, A. L., Larkin, J., Brown, C. T., Bonazzi, V. R., Dumontier, M. J., Sansone, S. A., Ma'ayan, A. (October 2019) FAIRshake: Toolkit to Evaluate the FAIRness of Research Digital Resources. Cell Syst, 9 (5). pp. 417-421. ISSN 2405-4712

Clarke, Daniel JB, Wang, Lily, Jones, Alex, Wojciechowicz, Megan L, Torre, Denis, Jagodnik, Kathleen M, Jenkins, Sherry L, McQuilton, Peter, Flamholz, Zachary, Silverstein, Moshe C, Schilder, Brian M, Robasky, Kimberly, Castillo, Claris, Idaszak, Ray, Ahalt, Stanley C, Williams, Jason, Schurer, Stephan, Cooper, Daniel J, de Miranda Azevedo, Ricardo, Klenk, Juergen A, Haendel, Melissa A, Nedzel, Jared, Avillach, Paul, Shimoyama, Mary E, Harris, Rayna M, Gamble, Meredith, Poten, Rudy, Charbonneau, Amanda L, Larkin, Jennie, Brown, C Titus, Bonazzi, Vivien R, Dumontier, Michel J, Sansone, Susanna-Assunta, Ma’ayan, Avi (June 2019) FAIRshake: toolkit to evaluate the findability, accessibility, interoperability, and reusability of research digital resources. BioRxiv. (Unpublished)

Conn, A., Chandrasekhar, A., Rongen, M. V., Leyser, O., Chory, J., Navlakha, S. (September 2019) Network trade-offs and homeostasis in Arabidopsis shoot architectures. PLoS Comput Biol, 15 (9). e1007325. ISSN 1553-734x (Public Dataset)

Croft, A. P., Campos, J., Jansen, K., Turner, J. D., Marshall, J., Attar, M., Savary, L., Wehmeyer, C., Naylor, A. J., Kemble, S., Begum, J., Durholz, K., Perlman, H., Barone, F., McGettrick, H. M., Fearon, D. T., Wei, K., Raychaudhuri, S., Korsunsky, I., Brenner, M. B., Coles, M., Sansom, S. N., Filer, A., Buckley, C. D. (May 2019) Distinct fibroblast subsets drive inflammation and damage in arthritis. Nature, 570 (7760). pp. 246-251. ISSN 0028-0836

Crow, M., Denk, F. (July 2019) RNA-seq data in pain research-an illustrated guide. Pain, 160 (7). pp. 1502-1504. ISSN 0304-3959

Crow, M., Gillis, J. (June 2019) Single cell RNA-sequencing: replicability of cell types. Current Opinion in Neurobiology, 56. pp. 69-77. ISSN 09594388 (ISSN)

Crow, M., Lim, N., Ballouz, S., Pavlidis, P., Gillis, J. (March 2019) Predictability of human differential gene expression. Proc Natl Acad Sci U S A. ISSN 0027-8424

Czeisler, C. M., Silva, T. M., Fair, S. R., Liu, J., Tupal, S., Kaya, B., Cowgill, A., Mahajan, S., Silva, P. E., Wang, Y., Blissett, A. R., Goksel, M., Borniger, J. C., Zhang, N., Fernandes-Junior, S. A., Catacutan, F., Alves, M. J., Nelson, R. J., Sundaresean, V., Rekling, J., Takakura, A. C., Moreira, T. S., Otero, J. J. (April 2019) The role of PHOX2B-derived astrocytes in chemosensory control of breathing and sleep homeostasis. J Physiol, 597 (8). pp. 2225-2251. ISSN 1469-7793

Dampanaboina, L., Jiao, Y., Chen, J., Gladman, N., Chopra, R., Burow, G., Hayes, C., Christensen, S. A., Burke, J., Ware, D., Xin, Z. (October 2019) Sorghum MSD3 Encodes an omega-3 Fatty Acid Desaturase that Increases Grain Number by Reducing Jasmonic Acid Levels. Int J Mol Sci, 20 (21). ISSN 1422-0067 (Public Dataset)

Dancsok, A. R., Setsu, N., Gao, D., Blay, J. Y., Thomas, D., Maki, R. G., Nielsen, T. O., Demicco, E. G. (July 2019) Expression of lymphocyte immunoregulatory biomarkers in bone and soft-tissue sarcomas. Mod Pathol, 32 (12). pp. 1662-1785. ISSN 0893-3952

Darby, C. A., Fitch, J. R., Brennan, P. J., Kelly, B. J., Bir, N., Magrini, V., Leonard, J., Cottrell, C. E., Gastier-Foster, J. M., Wilson, R. K., Mardis, E. R., White, P., Langmead, B., Schatz, M. C. (August 2019) Samovar: Single-Sample Mosaic Single-Nucleotide Variant Calling with Linked Reads. iScience, 18 (Specia). pp. 1-10. ISSN 2589-0042 (Public Dataset)

Dauparas, Justas, Wang, Haobo, Swartz, Avi, Koo, Peter, Nitzan, Mor, Ovchinnikov, Sergey (June 2019) Unified framework for modeling multivariate distributions in biological sequences. arXiv e-prints. (Unpublished)

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Wang, J. X., Furukawa, H. (January 2019) Dissecting diverse functions of NMDA receptors by structural biology. Curr Opin Struct Biol, 54. pp. 34-42. ISSN 0959-440x

Wang, X., Tucciarone, J., Jiang, S., Yin, F., Wang, B. S., Wang, D., Jia, Y., Jia, X., Li, Y., Yang, T., Xu, Z., Akram, M. A., Wang, Y., Zeng, S., Ascoli, G. A., Mitra, P., Gong, H., Luo, Q., Huang, Z. J. (March 2019) Genetic Single Neuron Anatomy Reveals Fine Granularity of Cortical Axo-Axonic Cells. Cell Rep, 26 (11). 3145-3159.e5.

Wang, Y., Leonard, M. K., Snyder, D. E., Fisher, M. L., Eckert, R. L., Kaetzel, D. M. (August 2019) NME1 Drives Expansion of Melanoma Cells with Enhanced Tumor Growth and Metastatic Properties. Mol Cancer Res, 17 (8). pp. 1665-1674. ISSN 1541-7786

Wang, Liya, Lu, Zhenyuan, delaBastide, Melissa, Van Buren, Peter, Wang, Xiaofei, Ghiban, Cornel, Regulski, Michael, Drenkow, Jorg, Xu, Xiaosa, Ortiz-Ramirez, Carlos, Fernandez-Marco, Cristina, Goodwin, Sara, Dobin, Alexander, Birnbaum, Kenneth, Jackson, David, Martienssen, Robert, McCombie, William, Micklos, David, Schatz, Michael, Ware, Doreen, Gingeras, Thomas (November 2019) Management, Analyses, and Distribution of the MaizeCODE Data on the Cloud. BioRxiv. (Unpublished)

Wei, Y. L., Vakoc, C. (July 2019) Probing leukemia vulnerabilities in vivousing domain-focused CRISPR screening. Cancer Research, 79 (13). Meeting Abstract 5161. ISSN 0008-5472

Weiner, B. G., Posfai, A., Wingreen, N. S. (August 2019) Spatial ecology of territorial populations. Proc Natl Acad Sci U S A, 116 (36). pp. 17874-17879. ISSN 0027-8424

Williams, J. J., Drew, J. C., Galindo-Gonzalez, S., Robic, S., Dinsdale, E., Morgan, W. R., Triplett, E. W., Burnette, J. M., Donovan, S. S., Fowlks, E. R., Goodman, A. L., Grandgenett, N. F., Goller, C. C., Hauser, C., Jungck, J. R., Newman, J. D., Pearson, W. R., Ryder, E. F., Sierk, M., Smith, T. M., Tosado-Acevedo, R., Tapprich, W., Tobin, T. C., Toro-Martinez, A., Welch, L. R., Wilson, M. A., Ebenbach, D., McWilliams, M., Rosenwald, A. G., Pauley, M. A. (November 2019) Barriers to integration of bioinformatics into undergraduate life sciences education: A national study of US life sciences faculty uncover significant barriers to integrating bioinformatics into undergraduate instruction. PLoS One, 14 (11). e0224288. ISSN 1932-6203

Williams, Edward H, Connell, Claire M, Weaver, James MJ, Beh, Ian, Potts, Harry, Whitley, Cameron T, Bird, Nicholas, Al-Sayed, Tamer, Monaghan, Phillip J, Fehr, Martin, Cathomas, Richard, Bertelli, Gianfilippo, Quinton, Amy, Lewis, Paul, Shamash, Jonathan, Wilson, Peter, Dooley, Michael, Poole, Susan, Mark, Patrick B, Bookman, Michael A, Earl, Helena, Jodrell, Duncan, Tavaré, Simon, Lynch, Andy G, Janowitz, Tobias (December 2019) Multicenter Validation of the CamGFR Model for Estimated Glomerular Filtration Rate. JNCI Cancer Spectrum, 3 (4). pkz068. ISSN 2515-5091

Wu, Q., Xu, F., Liu, L., Char, S. N., Ding, Y., Je, B. I., Schmelz, E., Yang, B., Jackson, D. (December 2019) The maize heterotrimeric G protein beta subunit controls shoot meristem development and immune responses. Proc Natl Acad Sci U S A, 117 (3). pp. 1799-1805. ISSN 0027-8424 (Public Dataset)

Yan, H., Li, B., Wang, J. (April 2019) Non-equilibrium landscape and flux reveal how the central amygdala circuit gates passive and active defensive responses. J R Soc Interface, 16 (153). p. 20180756. ISSN 1742-5662

Yang, N., Liu, J., Gao, Q., Gui, S., Chen, L., Yang, L., Huang, J., Deng, T., Luo, J., He, L., Wang, Y., Xu, P., Peng, Y., Shi, Z., Lan, L., Ma, Z., Yang, X., Zhang, Q., Bai, M., Li, S., Li, W., Liu, L., Jackson, D., Yan, J. (June 2019) Genome assembly of a tropical maize inbred line provides insights into structural variation and crop improvement. Nat Genet, 51 (6). pp. 1052-1059. ISSN 1061-4036

Yin, W., Borniger, J. C., Wang, X., Maguire, S. M., Munselle, M. L., Bezner, K. S., Tesfamariam, H. M., Garcia, A. N., Hofmann, H. A., Nelson, R. J., Gore, A. C. (November 2019) Estradiol treatment improves biological rhythms in a preclinical rat model of menopause. Neurobiol Aging, 83. pp. 1-10. ISSN 1558-1497

Yohe, M. E., Heske, C. M., Stewart, E., Adamson, P. C., Ahmed, N., Antonescu, C. R., Chen, E., Collins, N., Ehrlich, A., Galindo, R. L., Gryder, B. E., Hahn, H., Hammond, S., Hatley, M. E., Hawkins, D. S., Hayes, M. N., Hayes-Jordan, A., Helman, L. J., Hettmer, S., Ignatius, M. S., Keller, C., Khan, J., Kirsch, D. G., Linardic, C. M., Lupo, P. J., Rota, R., Shern, J. F., Shipley, J., Sindiri, S., Tapscott, S. J., Vakoc, C. R., Wexler, L. H., Langenau, D. M. (June 2019) Insights into pediatric rhabdomyosarcoma research: Challenges and goals. Pediatr Blood Cancer, 66 (10). article no. e27869. ISSN 1545-5009

Yoshimi, A., Lin, K. T., Wiseman, D. H., Rahman, M. A., Pastore, A., Wang, B., Lee, S. C., Micol, J. B., Zhang, X. J., de Botton, S., Penard-Lacronique, V., Stein, E. M., Cho, H., Miles, R. E., Inoue, D., Albrecht, T. R., Somervaille, T. C. P., Batta, K., Amaral, F., Simeoni, F., Wilks, D. P., Cargo, C., Intlekofer, A. M., Levine, R. L., Dvinge, H., Bradley, R. K., Wagner, E. J., Krainer, A. R., Abdel-Wahab, O. (October 2019) Coordinated alterations in RNA splicing and epigenetic regulation drive leukaemogenesis. Nature, 574 (7777). pp. 273-277. ISSN 0028-0836

Yu, D., Sul, J. H., Tsetsos, F., Nawaz, M. S., Huang, A. Y., Zelaya, I., Illmann, C., Osiecki, L., Darrow, S. M., Hirschtritt, M. E., Greenberg, E., Muller-Vahl, K. R., Stuhrmann, M., Dion, Y., Rouleau, G., Aschauer, H., Stamenkovic, M., Schlogelhofer, M., Sandor, P., Barr, C. L., Grados, M., Singer, H. S., Nothen, M. M., Hebebrand, J., Hinney, A., King, R. A., Fernandez, T. V., Barta, C., Tarnok, Z., Nagy, P., Depienne, C., Worbe, Y., Hartmann, A., Budman, C. L., Rizzo, R., Lyon, G. J., McMahon, W. M., Batterson, J. R., Cath, D. C., Malaty, I. A., Okun, M. S., Berlin, C., Woods, D. W., Lee, P. C., Jankovic, J., Robertson, M. M., Gilbert, D. L., Brown, L. W., Coffey, B. J., Dietrich, A., Hoekstra, P. J., Kuperman, S., Zinner, S. H., Luethvigsson, P., Saemundsen, E., Thorarensen, O., Atzmon, G., Barzilai, N., Wagner, M., Moessner, R., Ophoff, R., Pato, C. N., Pato, M. T., Knowles, J. A., Roffman, J. L., Smoller, J. W., Buckner, R. L., Willsey, A. J., Tischfield, J. A., Heiman, G. A., Stefansson, H., Stefansson, K., Posthuma, D., Cox, N. J., Pauls, D. L., Freimer, N. B., Neale, B. M., Davis, L. K., Paschou, P., Coppola, G., Mathews, C. A., Scharf, J. M. (March 2019) Interrogating the Genetic Determinants of Tourette's Syndrome and Other Tic Disorders Through Genome-Wide Association Studies. The American Journal of Psychiatry, 176 (3). pp. 217-227. ISSN 0002-953x

Zador, A. M. (August 2019) A critique of pure learning and what artificial neural networks can learn from animal brains. Nat Commun, 10 (1). p. 3770. ISSN 2041-1723

Zaki, A., Mitra, P. P., Rasmussen, L. K., Chatterjee, S. (March 2019) Estimate exchange over network is good for distributed hard thresholding pursuit. Signal Processing, 156. pp. 1-11. ISSN 01651684 (ISSN)

Zhang, Q., Chao, T. C., Patil, V. S., Qin, Y., Tiwari, S. K., Chiou, J., Dobin, A., Tsai, C. M., Li, Z., Dang, J., Gupta, S., Urdahl, K., Nizet, V., Gingeras, T. R., Gaulton, K. J., Rana, T. M. (March 2019) The long noncoding RNA ROCKI regulates inflammatory gene expression. Embo j, 38 (8). Article number e100041. ISSN 0261-4189

Zhang, X. O., Gingeras, T. R., Weng, Z. (August 2019) Genome-wide analysis of polymerase III-transcribed Alu elements suggests cell-type-specific enhancer function. Genome Res, 29 (9). pp. 1402-1414. ISSN 1088-9051

Zhao, Y., Shen, X., Tang, T., Wu, C. I. (July 2019) Weak Regulation of Many Targets Is Cumulatively Powerful-A Reply to Seitz on microRNA Functionality. Mol Biol Evol, 36 (7). pp. 1598-1599. ISSN 0737-4038

Zheng, Q., Woehl, J. L., Kitamura, S., Santos-Martins, D., Smedley, C. J., Li, G., Forli, S., Moses, J. E., Wolan, D. W., Sharpless, K. B. (September 2019) SuFEx-enabled, agnostic discovery of covalent inhibitors of human neutrophil elastase. Proc Natl Acad Sci U S A, 116 (38). pp. 18808-18814. ISSN 0027-8424 (Print)0027-8424

Ziamtsov, I., Navlakha, S. (October 2019) Machine learning approaches to improve three basic plant phenotyping tasks using 3D point clouds. Plant Physiol. ISSN 0032-0889

Book Section

Borniger, J. C., de Lecea, L. (February 2019) The Hypocretin Arousal Network. In: Oxford Research Encyclopedia of Neuroscience. Oxford University Press.

Cisse, Yasmine-Marie, Borniger, Jeremy C., Nelson, Randy J. (May 2019) Hormones, Circadian Rhythms, and Mental Health. In: The Oxford Handbook of Evolutionary Psychology and Behavioral Endocrinology. Oxford University Press, pp. 365-379. ISBN 9780190649739

Clevers, Hans, Tuveson, David A (2019) Organoid Models for Cancer Research. In: ANNUAL REVIEW OF CANCER BIOLOGY, VOL 3. Annual Reviews, pp. 223-234.

Xin, Z, Jiao, Y, Chopra, R, Gladman, N, Burow, G, Hayes, C, Chen, J, Emendack, Y, Ware, D, Burke, J (January 2019) Pedigreed mutant library-a unique resource for sorghum improvement and genomics. In: Sorghum: State of the Art and Future Perspectives. American Society of Agronomy and Crop Science Society of America, Inc., pp. 73-96. ISBN 9780891186274

Conference or Workshop Item

Burgess, M. A., Bolejack, V., Schuetze, S., Van Tine, B. A., Attia, S., Riedel, R. F., Hu, J. S., Davis, L. E., Okuno, S. H., Priebat, D. A., Movva, S., Reed, D. R., D'Angelo, S. P., Lazar, A. J., Keung, E. Z. Y., Reinke, D. K., Baker, L. H., Maki, R. G., Patel, S., Tawbi, H. A. H. (May 2019) Clinical activity of pembrolizumab (P) in undifferentiated pleomorphic sarcoma (UPS) and dedifferentiated/pleomorphic liposarcoma (LPS): Final results of SARC028 expansion cohorts. In: Annual Meeting of the American-Society-of-Clinical-Oncology (ASCO).

Chae, Honggoo, Banerjee, Arkarup, Albeanu, Dinu F (September 2019) Two parallel pathways for olfactory processing in the mammalian brain. In: UNSPECIFIED.

Chawla, S. P., Van Tine, B. A., Pollack, S., Ganjoo, K. N., Elias, A. D., Riedel, R. F., Attia, S., Choy, E., Okuno, S. H., Agulnik, M., von Mehren, M., Livingston, M. B., Keedy, V. L., Verschraegen, C. F., Philip, T., Bohac, G. C., Yurasov, S., Lu, H. L., Chen, M., Maki, R. G. (May 2019) A phase II randomized study of CMB305 and atezolizumab versus atezolizumab in NY-ESO-1(+) soft tissue sarcoma: Analysis of immunogenicity, tumor control, and patient survival. In: Annual Meeting of the American-Society-of-Clinical-Oncology (ASCO).

Chen, Yushu, Chen, Xiaoyin, Kebschull, Justus M, Koulakov, Alexei, Zador, Anthony M, Albeanu, Dinu F (September 2019) The logic of olfactory bulb outputs revealed by high-throughput single-neuron projection mapping using sequencing. In: UNSPECIFIED.

Dasilva, B., Lee, M. Y., Ramirez, D. C., Maki, R. G. (May 2019) A novel HMGA2-YAP1 fusion gene in a patient with aggressive angiomyxoma. In: Annual Meeting of the American-Society-of-Clinical-Oncology (ASCO).

Dauparas, Justas, Wang, Haobo, Swartz, Avi, Koo, Peter K., Nitzan, Mor, Ovchinnikov, Sergey (June 2019) Unified framework for modeling multivariate distributions in biological sequences. In: ICML Workshop for Computational Biology, Long Beach, CA.

Davidsson, M., Sellnow, R. C., Yonkers, R., Zador, A. M., Manfredsson, F. P. (April 2019) Using MAPseq to Assess Serotonergic Hyperinnervation in Non-Motor Circuits in the Parkinsonian Rat. In: 22nd Annual Meeting of the American-Society-of-Gene-and-Cell-Therapy (ASGCT).

Gornet, J., Venkataraju, K. U., Narasimhan, A., Turner, N., Lee, K., Seung, H. S., Osten, P., Sumbul, U. (April 2019) Reconstructing neuronal anatomy from whole-brain images. In: UNSPECIFIED.

Gupta, Priyanka, Dussauze, Marie, Livneh, Uri, Albeanu, Dinu F (September 2019) Studying the neuronal substrates of internal models via a novel closed-loop olfactory task for mice. In: UNSPECIFIED. (Unpublished)

Hwang, Chang-il, Roe, Jae-Seok, Lee, Eun Jung, Tonelli, Claudia, Somervile, Tim DD, Yao, Melissa, Milazzo, Joseph P, Tiriac, Herve, Park, Youngkyu, Vakoc, Christopher, Tuveson, David (December 2019) Engrailed-1 promotes pancreatic cancer progression via antagonizing COMPASS activity. In: AACR Special Conference on Pancreatic Cancer - Advances in Science and Clinical Care.

Kannan, UV, Palaniswamy, Ramesh, Cain, Nicholas, Harris, Julie, Osten, Pavel (August 2019) Characterizing spatial distribution of neuronal cell types in visual areas of mice brain imaged using Serial 2-photon tomography. In: ARVO Imaging in the Eye Conference.

Kim, Y., Krainer, A. R. (October 2019) TARGETING NONSENSE-MEDIATED MRNA DECAY FOR CYSTIC FIBROSIS THERAPY. In: The 33rd Annual North American Cystic Fibrosis Conference.

Koo, P. K., Ploenzke, Matt (June 2019) Improving Convolutional Network Interpretability with Exponential Activations. In: ICML Workshop for Computational Biology, Long Beach, CA.

Koo, Peter K., Qian, Sharon, Volf, Verena, Kalimeris, Dimitris (June 2019) Robust Neural Networks are More Interpretable for Genomics. In: ICML Workshop for Computational Biology, Long Beach, CA.

Lin, Shan, Tarumoto, Yusuke, Wang, Jinhua, Milazzo, Joseph, Xu, Yali, Gray, Nathanael, Vakoc, Christopher, Stegmaier, Kimberly (November 2019) Targeting Salt-Inducible Kinase 3 As a Therapeutic Approach for Acute Myeloid Leukemia. In: American Society of Hematology.

Londhe, Avinash, Boivin, Ben, Bergeron, Alexandre, Rizvi, Syed Husain Mustafa, Kim, Seung Jun, Rivera, Keith, Pappin, Darryl, Tonks, Nicholas (December 2019) 6Characterization of PTP1B Activation by Small Molecules. In: 26th Annual Meeting of the Society-for-Redox-Biology-and-Medicine (SFRBM).

Marchione, Dylan M, Ilieva, Ilyana, Garcia, Benjamin A, Pappin, Darryl J, Wojcik, John B, Wilson, John P (August 2019) HYPERsol: flash-frozen results from archival FFPE samples for clinical proteomics. In: Molecular and Cellular Proteomics.

Pinkhasov, Tzvia, Starosta, Sarah, Kepecs, Adam (December 2019) Midbrain Dopamine Neuron Activity Predicts Impulsive Actions in Mice. In: 58th Annual Meeting of the American-College-of-Neuropsychopharmacology (ACNP).

Regan, C., Hao, Y., Preall, J. (July 2019) Stromal cell plasticity and immune surveillance revealed by single-cell transcriptomics. In: AACR Annual Meeting 2019.

Ryan, Niamh, Lihm, Jayon, Kramer, Melissa, McCarthy, Shane, Evans, Kathryn, Ghiban, Elena, Millar, J Kirsty, Scotland, Generation, McIntosh, Andrew, Blackwood, Douglas, Lawrie, Stephen, Porteous, David, McCombie, W Richard, Thomson, Pippa (2019) BEYOND THE TRANSLOCATION: WHOLE GENOME SEQUENCING ANALYSIS OF THE SCOTTISH T(1;11) FAMILY. In: 25th World Congress of Psychiatric Genetics (WCPG).

Smith, J. L., Mou, H. W., Zhang, X. O., Ozata, D., Xue, W. (May 2019) Modeling and identifying therapeutic targets in Hepatoblastoma. In: Annual Meeting of the American-Society-of-Clinical-Oncology (ASCO).

Tran, NB, Kepple, DR, Shuvaev, SA, Koulakov, AA (January 2019) Deepnose: Using artificial neural networks to represent the space of odorants. In: 36th International Conference on Machine Learning, ICML 2019.

Tward, D, Li, X, Huo, B, Lee, B, Mitra, P, Miller, M (January 2019) 3D Mapping of Serial Histology Sections with Anomalies Using a Novel Robust Deformable Registration Algorithm. In: Multimodal Brain Image Analysis and Mathematical Foundations of Computational Anatomy.

Van Eck, Joyce, Reem, Nathan, Swartwood, Kerry, Shenstone, Esperanza, Williams, Brandon, Lippman, Zachary B (June 2019) Improvement of Goldenberry and Groundcherry by CRISPR: Ripening the Potential of Underutilized Fruit Crops. In: In Vitro Biology Meeting Abstract.

Venkataraju, K. U., Gornet, J., Murugaiyan, G., Wu, Z., Osten, P. (February 2019) Development of brain templates for whole brain atlases. In: Neural Imaging and Sensing 2019, San Francisco, CA.

Zhang, Qiong, Chao, Ti-chun, Patil, Veena S, Qin, Yue, Tiwari, Shashi Kant, Chiou, Joshua, Dobin, Alexander, Tsai, Chih-Ming, Li, Zhonghan, Dang, Jason, Gupta, Shagun, Urdahl, Kevin B, Nizet, Victor, Gingeras, Thomas R, Gaulton, Kyle J, Rana, Tariq M (May 2019) Genome-wide analysis identifies pairs of cis-acting lncRNAs and protein-coding genes involved in innate immunity. In: UNSPECIFIED. (Unpublished)

Book

Phan, M. S., Matho, K., Abdeladim, L., Livet, J., Beaurepaire, E., Chessel, A. (April 2019) Automated quantification with sub-micrometer scale precision in volumetric multicolor multiphoton microscopy images. Institute of Electrical and Electronics Engineers, 521-525; art no 8759200. ISBN 19457928 (ISSN); 9781538636411 (ISBN)

Thesis

Bružas, Emilis (August 2019) The Role Of Immunity In Breast Cancer Dormancy And Recurrence. PhD thesis, Cold Spring Harbor Laboratory.

Giovanniello, Jacqueline (October 2019) Characterizing amygdala-pallidal circuitry and its role in behavioral dysfunction in a 16p11.2 microdeletion model of ASD. PhD thesis, Cold Spring Harbor Laboratory.

Gutbrod, Michael J. (November 2019) Chromosomal Functions of RNA Interference and Small RNAs in Early Mammalian Development. PhD thesis, Cold Spring Harbor Laboratory.

Maiorino, L. (August 2019) Identification Of Cancer-Cell Intrinsic And Host-Mediated Cellular Mechanisms Of Metastasis Through Intravital Imaging. PhD thesis, Cold Spring Harbor Laboratory.

Pisupati, Sashank (April 2019) A value-based explanation for lapses in perceptual decisions. PhD thesis, Cold Spring Harbor.

Yordanov, Georgi Nenov (July 2019) Myc and Spdef: two transcription factors hijacked by pancreatic cancer. PhD thesis, Cold Spring Harbor.

Dataset

Churchland, A. K., Musall, Simon, Kaufman, Matthew T., Juavinett, A. L., Gluf, S. (October 2019) Dataset from: Single-trial neural dynamics are dominated by richly varied movements. [Dataset]

Juavinett, A. L., Bekheet, G., Churchland, A. K. (August 2019) Chronically-implanted Neuropixels probes enable high yield recordings in freely moving mice: dataset. [Dataset]

Najafi, Farzaneh, Elsayed, Gamaleldin F, Cao, Robin, Pnevmatikakis, Eftychios, Latham, Peter E, Cunningham, John P, Churchland, Anne K (February 2019) Dataset from "Farzaneh Najafi, Gamaleldin F Elsayed, Robin Cao, Eftychios Pnevmatikakis, Peter E. Latham, John P Cunningham, Anne K Churchland (bioRxiv, 2018); Excitatory and inhibitory subnetworks are equally selective during decision-making and emerge simultaneously during learning.”. [Dataset] (Unpublished)

Other

Witkowski, J. (April 2019) Unravelling the Double Helix: The Lost Heroes of DNA. Springer Nature, Nature.

This list was generated on Sat Nov 9 00:06:07 2024 EST.