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Number of items at this level: 77.

A

Adesnik, H., Bruns, W., Taniguchi, H., Huang, Z. J., Scanziani, M. (October 2012) A neural circuit for spatial summation in visual cortex. Nature, 490 (7419). pp. 226-231. ISSN 0028-0836

Albeanu, D. F. (November 2012) Talk from Florin Albeanu at the Cold Spring Harbor Laboratory In-House Symposium (2012). [Video] (Unpublished)

Allegra, N., Bamieh, B., Mitra, P., Sire, C. (January 2018) Phase transitions in distributed control systems with multiplicative noise. Journal of Statistical Mechanics-Theory and Experiment. ISSN 1742-5468

B

Bamieh, B., Jovanović, M. R., Mitra, P., Patterson, S. (2012) Coherence in large-scale networks: Dimension-dependent limitations of local feedback. IEEE Transactions on Automatic Control, 57 (9). pp. 2235-2249.

Bartley, A. F., Huang, Z. J., Huber, K. M., Gibson, J. R. (October 2008) Differential Activity-Dependent, Homeostatic Plasticity of Two Neocortical Inhibitory Circuits. J Neurophysiol, 100 (4). pp. 1983-1994.

Bokil, H., Pesaran, B., Andersen, R. A., Mitra, P. P. (2005) A framework for detection and classification of events in neural activity. arXiv.

Bokil, H. S., Mitra, P. P. (2007) Non-parametric methods for the analysis of neurobiological time-series data. 46th IEEE Conference on Decision and Control, 2007. pp. 5833-5838.

Brauth, S. E., Heaton, J. T., Shea, S. D., Durand, S. E., Hall, W. S. (January 1997) Functional anatomy of forebrain vocal control pathways in the budgerigar (Melopsittacus undulatus). Annals of the New York Academy of Sciences, 807. pp. 368-85. ISSN 0077-8923 (Print)0077-8923

Brody, C. D., Hopfield, J. J. (March 2003) Simple networks for spike-timing-based computation, with application to olfactory processing. Neuron, 37 (5). pp. 843-852. ISSN 0896-6273

C

Chakraborty, S. (November 2005) Analysis and Modeling of Neural Connectivity in a Short Term Memory System. PhD thesis, Cold Spring Harbor Laboratory.

Chattopadhyaya, B., Baho, E., Huang, Z. J., Schachner, M., Di Cristo, G. (2013) Neural cell adhesion molecule-mediated fyn activation promotes GABAergic synapse maturation in postnatal mouse cortex. Journal of Neuroscience, 33 (14). pp. 5957-68. ISSN 0270-6474

Chattopadhyaya, B., Di Cristo, G., Higashiyama, H., Knott, G. W., Kuhlman, S. J., Welker, E., Huang, Z. J. (October 2004) Experience and activity-dependent maturation of perisomatic GABAergic innervation in primary visual cortex during a postnatal critical period. Journal of Neuroscience, 24 (43). pp. 9598-611. ISSN 0270-6474

Chen, B. L. (2007) Neuronal Network of C. elegans: from Anatomy to Behavior. PhD thesis, Cold Spring Harbor Laboratory.

Chklovskii, D. B., Koulakov, A. A. (September 2000) A wire length minimization approach to ocular dominance patterns in mammalian visual cortex. Physica A-Statistical Mechanics and Its Applications, 284 (1-4). pp. 318-334. ISSN 0378-4371

Chklovskii, D. B., Stevens, C. F. (2000) Wiring Optimization in the Brain. In: Advances in neural information processing systems 12 : proceedings of the 1999 conference. MIT Press, Cambridge, Mass., pp. 103-107. ISBN 0262194503

Cowley, B. R., Kaufman, M. T., Butler, Z. S., Churchland, M. M., Ryu, S. I., Shenoy, K. V., Yu, B. M. (December 2013) DataHigh: Graphical user interface for visualizing and interacting with high-dimensional neural activity. Journal of Neural Engineering, 10 (6). ISSN 17412560 (ISSN)

Cox, C. L., Denk, W., Tank, D. W., Svoboda, K. (August 2000) Action potentials reliably invade axonal arbors of rat neocortical neurons. Proceedings of the National Academy of Sciences of the United States of America, 97 (17). pp. 9724-9728. ISSN 0027-8424

D

DeWeese, M. R., Zador, A. M. (February 2006) Neurobiology: Efficiency measures. Nature, 439 (7079). pp. 920-921. ISSN 00280836

Delevich, K., Tucciarone, J., Huang, Z. J., Li, B. (April 2015) The Mediodorsal Thalamus Drives Feedforward Inhibition in the Anterior Cingulate Cortex via Parvalbumin Interneurons. Journal of Neuroscience , 35 (14). pp. 5743-53. ISSN 0270-6474

E

Engel, T. A., Helbig, B., Russell, D. F., Schimansky-Geier, L., Neiman, A. B. (August 2009) Coherent stochastic oscillations enhance signal detection in spiking neurons. Phys Rev E Stat Nonlin Soft Matter Phys, 80 (2 Pt 1). 021919. ISSN 1539-3755 (Print)1539-3755 (Linking)

Engel, T. A., Schimansky-Geier, L., Herz, A. V., Schreiber, S., Erchova, I. (September 2008) Subthreshold membrane-potential resonances shape spike-train patterns in the entorhinal cortex. J Neurophysiol, 100 (3). pp. 1576-89. ISSN 0022-3077 (Print)0022-3077 (Linking)

Engel, T. A., Wang, X. J. (May 2011) Same or different? A neural circuit mechanism of similarity-based pattern match decision making. J Neurosci, 31 (19). pp. 6982-96. ISSN 1529-2401 (Electronic)0270-6474 (Linking)

Engel, Tatiana (2007) Firing statistics in neurons as non-Markovian first passage time problem. PhD thesis, Humboldt-Universität zu Berlin, Mathematisch-Naturwissenschaftliche Fakultät I.

G

Goodhill, G., Baker, C., Balasubramanian, V., Bazhenov, M., Beck, J., Becker, S., Bethge, M., Boahen, K., Boden, M., Bonin, V., Bouret, S., Fairhall, A., Flash, T., French, R., Gillies, A., Gollisch, T., Gurney, K., Gutkin, B., Hayhoe, M., Hunt, J., Ibbotson, M., Kepecs, A., Kingdom, F., Kropff, E., Longden, K., Marder, E., Miikkulainen, R., Oliva, A., Olshausen, B., Pillow, J., Prenger, R., Redish, D., Rolls, E., Rucci, M., Breakspear, M., Bressloff, P., Bulthoff, H., Burgess, N., Burkitt, A., Butts, D., Carreira-Perpinan, M., Chklovskii, D., Eden, U., Ermentrout, B., Schmidhuber, J., Semyanov, A., Sharpee, T., Smith, A., Sommer, F., Srinivasan, M., Stanley, G., Stopfer, M., Tanaka, H., Theunissen, F., Tranchina, D., Treves, A., Van Ooyen, A., Verschure, P., Vorobyev, M., Wachtler, T., Wallis, G., Willmore, B., Wiskott, L., Wyeth, G., Zanker, J., Zetzsche, C., Zhaoping, L. (2008) Network: Computation in Neural Systems: Editorial. Network: Computation in Neural Systems, 19 (1). pp. 1-2. ISSN 0954898X (ISSN)

H

Hopfield, J. J., Brody, C. D. (February 2003) Separating objects and 'neural' computation. Comptes Rendus Biologies, 326 (2). pp. 219-222. ISSN 1631-0691

Huang, E. P. (July 1999) A meeting of minds: learning and memory in 1999. Learning & Memory, 6 (4). pp. 341-6. ISSN 1072-0502

Huang, Z. J., Satterlie, R. A. (1990) Neuronal mechanisms underlying behavioral switching in a pteropod mollusc. Journal of Comparative Physiology - A Sensory, Neural, and Behavioral Physiology, 166 (6). pp. 875-887. ISSN 03407594 (ISSN)

K

Karnani, Mahesh M, Jackson, Jesse, Ayzenshtat, Inbal, Tucciarone, Jason, Manoocheri, Kasra, Snider, William G, Yuste, Rafael (April 2016) Cooperative Subnetworks of Molecularly Similar Interneurons in Mouse Neocortex. Neuron, 90 (1). pp. 86-100. ISSN 0896-6273

Kaufman, M. T., Churchland, M. M., Ryu, S. I., Shenoy, K. V. (February 2014) Cortical activity in the null space: permitting preparation without movement. Nature Neuroscience, 17 (3). pp. 440-448. ISSN 1097-6256

Kepecs, A. (November 2011) Talk from Adam Kepecs at the Cold Spring Harbor Laboratory In-House Symposium (2011). [Video] (Unpublished)

Kepecs, A., Fishell, G. (January 2014) Interneuron cell types are fit to function. Nature, 505 (7483). pp. 318-326. ISSN 0028-0836

Kepecs, A., Lisman, J. (February 2003) Information encoding and computation with spikes and bursts. Network, 14 (1). pp. 103-18. ISSN 0954-898X (Print)

Kepecs, A., Van Rossum, M. C. W., Song, S., Tegner, J. (2002) Spike-timing-dependent plasticity: Common themes and divergent vistas. Biological Cybernetics, 87 (5-6). pp. 446-458. ISSN 03401200 (ISSN)

Kepecs, A., Wang, X. J. (2000) Analysis of complex bursting in cortical pyramidal neuron models. Neurocomputing, 32-33. pp. 181-187. ISSN 09252312 (ISSN)

Kepple, D. R., Giaffar, H., Rinberg, D., Koulakov, A. A. (October 2018) Primacy coding in dual olfactory networks. 51st Asilomar Conference on Signals, Systems, and Computers, 2017-O. pp. 587-592.

Knott, S., Mostafavi, S., Mousavi, P. (2010) A neural network based modeling and validation approach for identifying gene regulatory networks. Neurocomputing, 73 (13-15). pp. 2419-2429.

Koulakov, A. A. (November 2012) Talk from Alex Koulakov at the Cold Spring Harbor Laboratory In-House Symposium (2012). [Video] (Unpublished)

Koulakov, A. A., Chklovskii, D. B. (February 2001) Orientation preference patterns in mammalian visual cortex: A wire length minimization approach. Neuron, 29 (2). pp. 519-527. ISSN 0896-6273

Koulakov, A. A., Raghavachari, S., Kepecs, A., Lisman, J. E. (2002) Model for a robust neural integrator. Nature Neuroscience, 5 (8). pp. 775-782. ISSN 10976256 (ISSN)

Kvitsiani, D., Ranade, S., Hangya, B., Taniguchi, H., Huang, J. Z., Kepecs, A. (May 2013) Distinct behavioural and network correlates of two interneuron types in prefrontal cortex. Nature, 498 (7454). pp. 363-366. ISSN 1476-4687 (Electronic)0028-0836 (Linking)

L

Lin, H., Hangya, B., Fox, S. E., Muller, R. U. (March 2012) Repetitive convulsant-induced seizures reduce the number but not precision of hippocampal place cells. Journal of Neuroscience, 32 (12). pp. 4163-78. ISSN 0270-6474

Liu, J., Lee, H. J., Weitz, A. J., Fang, Z., Lin, P., Choy, M., Fisher, R., Pinskiy, V., Tolpygo, A., Mitra, P., Schiff, N., Lee, J. H. (December 2015) Frequency-selective control of cortical and subcortical networks by central thalamus. Elife, 4. e09215. ISSN 2050-084X (Electronic)2050-084X (Linking)

Lu, J., Tucciarone, J., Padilla-Coreano, N., He, M., Gordon, J. A., Huang, Z. J. (October 2017) Selective inhibitory control of pyramidal neuron ensembles and cortical subnetworks by chandelier cells. Nat Neurosci, 20 (10). pp. 1377-1383. ISSN 1097-6256

M

Machens, C. K. (June 2002) Adaptive sampling by information maximization. Physical Review Letters, 88 (22). ISSN 0031-9007

Machens, C. K., Brody, C. D. (February 2008) Design of continuous attractor networks with monotonic tuning using a symmetry principle. Neural Comput, 20 (2). pp. 452-85.

Masse, N. Y., Turner, G. C., Jefferis, G. S. X. E. (August 2009) Olfactory Information Processing in Drosophila. Current Biology, 19 (16). R700-R713. ISSN 0960-9822

Milo, R., Shen-Orr, S., Itzkovitz, S., Kashtan, N., Chklovskii, D., Alon, U. (October 2002) Network motifs: Simple building blocks of complex networks. Science, 298 (5594). pp. 824-827. ISSN 0036-8075

N

Neiman, Alexander, Engel, Tatiana (2008) Information transfer in ampullary electroreceptors. APS Meeting Abstracts.

Neiman, Alexander, Engel, Tatiana, Russell, David, Helbig, Brian, Schimansky-Geier, Lutz (2009) Epithelial oscillations enhance signal detection in a peripheral sensory system. APS Meeting Abstracts.

Nikitchenko, M., Koulakov, A. A. (October 2008) Neural Integrator: A Sandpile Model. Neural Comput, 20 (10). pp. 2379-2417.

P

Perez-Orive, J., Mazor, O., Turner, G. C., Cassenaer, S., Wilson, R. I., Laurent, G. (2002) Oscillations and sparsening of odor representations in the mushroom body. Science, 297 (5580). pp. 359-365. ISSN 00368075 (ISSN)

Poucet, B., Sargolini, F., Song, E. Y., Hangya, B., Fox, S., Muller, R. U. (January 2014) Independence of landmark and selfmotion-guided navigation: A different role for grid cells. Philosophical Transactions of the Royal Society B: Biological Sciences, 369 (1635). ISSN 09628436 (ISSN)

Pouget, A., Drugowitsch, J., Kepecs, A. (February 2016) Confidence and certainty: distinct probabilistic quantities for different goals. Nat Neurosci, 19 (3). pp. 366-74. ISSN 1546-1726 (Electronic)1097-6256 (Linking)

R

Ramanan, K., Sengupta, A., Ziedins, I., Mitra, P. P. (2002) Markov random field models of multicasting in tree networks. Advances in Applied Probability, 34 (1). pp. 58-84. ISSN 00018678 (ISSN)

Rockland, K. S. (May 2015) About connections. Front Neuroanat, 9. p. 61. ISSN 1662-5129 (Electronic)1662-5129 (Linking)

S

Sanders, H., Kolterman, B. E., Shusterman, R., Rinberg, D., Koulakov, A., Lisman, J. (September 2014) A network that performs brute-force conversion of a temporal sequence to a spatial pattern: relevance to odor recognition. Frontiers in Computational Neuroscience, 8. Article no.108. ISSN 1662-5188

Shao, L., Lu, B., Wen, Z., Teng, S., Wang, L., Zhao, Y., Wang, L., Ishizuka, K., Xu, X., Sawa, A., Song, H., Ming, G., Zhong, Y. (July 2017) Disrupted-in-Schizophrenia-1 (DISC1) protein disturbs neural function in multiple disease-risk pathways. Hum Mol Genet, 26 (14). pp. 2634-2648. ISSN 0964-6906

Shenoy, K. V., Meeker, D., Cao, S., Kureshi, S. A., Pesaran, B., Buneo, C. A., Batista, A. P., Mitra, P. P., Burdick, J. W., Andersen, R. A. (2003) Neural prosthetic control signals from plan activity. NeuroReport, 14 (4). pp. 591-596. ISSN 09594965 (ISSN)

Sheppard, J. P., Wang, J. P., Wong, P. C. M. (May 2012) Large-scale cortical network properties predict future sound-to-word learning success. Journal of Cognitive Neuroscience, 24 (5). pp. 1087-1103. ISSN 0898-929X

Sussillo, David, Churchland, Mark M., Kaufman, Matthew T., Shenoy, Krishna V. (June 2015) A neural network that finds a naturalistic solution for the production of muscle activity. Nat Neurosci, 18 (7). pp. 1025-1033. ISSN 1097-6256

Svoboda, K., Ugurbil, K. (October 2003) New technologies: probing neurons and their networks - Editorial Overview. Current Opinion in Neurobiology, 13 (5). pp. 568-569. ISSN 0959-4388

T

Triplett, J. W., Pfeiffenberger, C., Yamada, J., Stafford, B. K., Sweeney, N. T., Litke, A. M., Sher, A., Koulakov, A. A., Feldheim, D. A. (November 2011) Competition is a driving force in topographic mapping. Proceedings of the National Academy of Sciences of the United States of America, 108 (47). pp. 19060-19065. ISSN 00278424

Turner, G. C. (November 2012) Talk from Glenn Turner at the Cold Spring Harbor Laboratory In-House Symposium (2012). [Video] (Unpublished)

Turner, G. C., Bazhenov, M., Laurent, G. (February 2008) Olfactory Representations by Drosophila Mushroom Body Neurons. Journal of Neurophysiology, 99. 734 - 746. ISSN 0022-3077

U

Utama, R., Piekarewicz, J. (January 2018) Validating neural-network refinements of nuclear mass models. Physical Review C, 97 (1). article no. 014306.

V

Varshney, L. R., Chen, B. L., Paniagua, E., Hall, D. H., Chklovskii, D. B. (February 2011) Structural Properties of the Caenorhabditis elegans Neuronal Network. Plos Computational Biology, 7 (2). ISSN 1553-734X

Verechtchaguina, T., Schimansky-Geier, L., Sokolov, I. M. (September 2004) Spectra and waiting-time densities in firing resonant and nonresonant neurons. Phys Rev E Stat Nonlin Soft Matter Phys, 70 (3 Pt 1). 031916. ISSN 1539-3755 (Print)1539-3755 (Linking)

Verechtchaguina, T., Sokolov, I. M., Schimansky-Geier, L. (March 2006) First passage time densities in non-Markovian models with subthreshold oscillations. Europhysics Letters, 73 (5). pp. 691-697. ISSN 0295-5075

Verechtchaguina, T., Sokolov, I. M., Schimansky-Geier, L. (March 2006) First passage time densities in resonate-and-fire models. Phys Rev E Stat Nonlin Soft Matter Phys, 73 (3 Pt 1). 031108. ISSN 1539-3755 (Print)1539-3755 (Linking)

Verechtchaguina, T., Sokolov, I. M., Schimansky-Geier, L. (May 2007) Interspike interval densities of resonate and fire neurons. Biosystems, 89 (1-3). pp. 63-8. ISSN 0303-2647 (Print)0303-2647 (Linking)

Vidne, M., Ahmadian, Y., Shlens, J., Pillow, J. W., Kulkarni, J., Litke, A. M., Chichilnisky, E. J., Simoncelli, E., Paninski, L. (August 2012) Modeling the impact of common noise inputs on the network activity of retinal ganglion cells. Journal of Computational Neuroscience, 33 (1). pp. 97-121. ISSN 09295313 (ISSN)

W

Wei, Y. (2012) Eigenvalue spectra of asymmetric random matrices for multicomponent neural networks. Physical Review E , 85 (6-2).

Wei, Y., Tsigankov, D., Koulakov, A. (December 2013) The molecular basis for the development of neural maps. Annals of the New York Academy of Sciences, 1305. pp. 44-60. ISSN 0077-8923

Wilson, C. D., Serrano, G. O., Koulakov, A. A., Rinberg, D. (November 2017) A primacy code for odor identity. Nat Commun, 8 (1). p. 1477. ISSN 2041-1723

Wilson, R. I., Turner, G. C., Laurent, G. (2004) Transformation of Olfactory Representations in the Drosophila Antennal Lobe. Science, 303 (5656). pp. 366-370. ISSN 00368075 (ISSN)

Wu, M. V., Manoli, D. S., Fraser, E. J., Coats, J. K., Tollkuhn, J., Honda, S., Harada, N., Shah, N. M. (October 2009) Estrogen masculinizes neural pathways and sex-specific behaviors. Cell, 139 (1). pp. 61-72. ISSN 1097-4172 (Electronic)0092-8674 (Linking)

Z

Zador, A. M., Pearlmutter, B. A. (1996) VC Dimension of an Integrate-and-Fire Neuron Model. Neural Computation, 8 (3). pp. 611-624.

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