Items where Subject is "bioinformatics > genomics and proteomics > genetics & nucleic acid processing > DNA, RNA structure, function, modification > mRNA dynamics"

Up a level
Export as [feed] Atom [feed] RSS 1.0 [feed] RSS 2.0
Group by: Authors | Item Type
Jump to: A | B | C | D | E | F | G | H | J | K | L | M | P | R | S | T | V | Z
Number of items at this level: 48.

A

Ahola, H., Stenlund, A., Moreno-Lopez, J., Pettersson, U. (1987) Promoters and processing sites within the transforming region of bovine papillomavirus type 1. J Virol, 61 (7). pp. 2240-4. ISSN 0022-538X (Print)0022-538X (Linking)

Andl, T., Murchison, E. P., Liu, Fei, Zhang, Yi, Yunta-Gonzalez, M., Tobias, J. W., Andl, C. D., Seykora, J. T., Hannon, G. J., Millar, S. E. (2006) The miRNA-Processing Enzyme Dicer Is Essential for the Morphogenesis and Maintenance of Hair Follicles. Current Biology, 16 (10). pp. 1041-1049. ISSN 09609822

B

Bestman, J. E., Cline, H. T. (2008) The RNA binding protein CPEB regulates dendrite morphogenesis and neuronal circuit assembly in vivo. Proc Natl Acad Sci U S A, 105 (51). 20494-20499 .

C

Castellano, S., Macchi, F., Scali, M., Huang, Z. J., Bozzi, Y. (2006) Cytosolic branched chain aminotransferase (BCATc) mRNA is up-regulated in restricted brain areas of BDNF transgenic mice. Brain Research, 1108 (1). pp. 12-18. ISSN 00068993

Chuck, G., Whipple, C., Jackson, D. P., Hake, S. (2010) The maize SBP-box transcription factor encoded by tasselsheath4 regulates bract development and the establishment of meristem boundaries. Development (Cambridge, England), 137 (8). pp. 1243-1250. ISSN 14779129 (ISSN)

Corbeil, J., Sheeter, D., Genini, D., Rought, S., Leoni, L., Du, P., Ferguson, M., Masys, D. R., Welsh, J. B., Fink, J. L., Sasik, R., Huang, D., Drenkow, J., Richman, D. D., Gingeras, T. R. (2001) Temporal gene regulation during HIV-1 infection of human CD4+ T cells. Genome Research, 11 (7). pp. 1198-1204. ISSN 10889051 (ISSN)

Curley, A. A., Eggan, S. M., Lazarus, M. S., Huang, Z. J., Volk, D. W., Lewis, D. A. (2013) Role of glutamic acid decarboxylase 67 in regulating cortical parvalbumin and GABA membrane transporter 1 expression: Implications for schizophrenia. Neurobiology of Disease, 50 (1). pp. 179-186. ISSN 0969-9961

D

Davuluri, R. V., Suzuki, Y., Sugano, S., Zhang, M. Q. (2000) CART classification of human 5 ' UTR sequences. Genome Research, 10 (11). pp. 1807-1816. ISSN 1088-9051

Dunn, E. F., Hammell, C. M., Hodge, C. A., Cole, C. N. (2005) Yeast poly(A)-binding protein, Pab1, and PAN, a poly(A) nuclease complex recruited by Pab1, connect mRNA biogenesis to export. Genes and Development, 19 (1). pp. 90-103. ISSN 08909369 (ISSN)

E

Eggan, S. M., Lazarus, M. S., Stoyak, S. R., Volk, D. W., Glausier, J. R., Huang, Z. J., Lewis, D. A. (2012) Cortical glutamic acid decarboxylase 67 deficiency results in lower cannabinoid 1 receptor messenger RNA expression: Implications for schizophrenia. Biological Psychiatry, 71 (2). pp. 114-119. ISSN 00063223 (ISSN)

F

Feng, Z., Jin, S., Zupnick, A., Hoh, J., De Stanchina, E., Lowe, S. W., Prives, C., Levine, A. J. (2006) p53 tumor suppressor protein regulates the levels of huntingtin gene expression. Oncogene, 25 (1). pp. 1-7. ISSN 09509232

G

Girard, A., Sachidanandam, R., Hannon, G. J., Carmell, M. A. (2006) A germline-specific class of small RNAs binds mammalian Piwi proteins. Nature, 442 (7099). pp. 199-202. ISSN 00280836

H

Hammell, C. M., Gross, S., Zenklusen, D., Heath, C. V., Stutz, F., Moore, C., Cole, C. N. (2002) Coupling of termination, 3′ processing, and mRNA export. Molecular and Cellular Biology, 22 (18). pp. 6441-6457. ISSN 02707306 (ISSN)

Hannon, G. J., Maroney, P. A., Denker, J. A., Nilsen, T. W. (1990) Trans splicing of nematode pre-messenger RNA in vitro. Cell, 61 (7). pp. 1247-1255. ISSN 00928674 (ISSN)

He, L., Hannon, G. J. (2004) MicroRNAs: Small RNAs with a big role in gene regulation. Nature Reviews Genetics, 5 (8). pp. 522-532. ISSN 1471-0056

Hu, J. S., Durst, M., Kerb, R., Truong, V., Ma, J. T., Khurgin, E., Balaban, D., Gingeras, T. R., Hoffman, B. B. (2000) Analysis of drug pharmacology towards predicting drug behavior by expression profiling using high-density oligonucleotide arrays. Annals of the New York Academy of Sciences, 919. pp. 9-15. ISSN 00778923 (ISSN)

J

Jackson, D. P. (2002) Double labeling of KNOTTED1 mRNA and protein reveals multiple potential sites of protein trafficking in the shoot apex. Plant Physiology, 129 (4). pp. 1423-1429. ISSN 0032-0889

Jackson, D. P. (2005) Transcription Factor Movement Through Plasmadesmata. In: Plasmodesmata. Blackwell Publishing Ltd, pp. 113-134. ISBN 9780470988572

K

Karginov, F. V., Hannon, G. J. (2013) Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates. Genes and Development, 27 (14). pp. 1624-32. ISSN 08909369 (ISSN)

Karp, X., Hammell, M., Ow, M. C., Ambros, V. (2011) Effect of life history on microRNA expression during C. elegans development. RNA, 17 (4). pp. 639-651. ISSN 13558382 (ISSN)

Krainer, Adrian (1997) Eukaryotic mRNA processing. IRL Press at Oxford University Press. ISBN 9780199634187

Kwee, L., Lucito, R., Aufiero, B., Schneider, R. J. (1992) Alternate translation initiation on hepatitis B virus X mRNA produces multiple polypeptides that differentially transactivate class II and III promoters. J Virol, 66 (7). pp. 4382-9.

L

Lachke, S. A., Alkuraya, F. S., Kneeland, S. C., Ohn, T., Aboukhalil, A., Howell, G. R., Saadi, I., Cavallesco, R., Yue, Y. Z., Tsai, A. C. H., Nair, K. S., Cosma, M. I., Smith, R. S., Hodges, E., AlFadhli, S. M., Al-Hajeri, A., Shamseldin, H. E., Behbehani, A., Hannon, G. J., Bulyk, M. L., Drack, A. V., Anderson, P. J., John, S. W. M., Maas, R. L. (2011) Mutations in the RNA Granule Component TDRD7 Cause Cataract and Glaucoma. Science, 331 (6024). pp. 1571-1576. ISSN 0036-8075

Lewis, J. B., Esche, H., Smart, J. E., Stillman, B. W., Harter, M. L., Mathews, M. B. (1979) Organization and expression of the left third of the genome of adenovirus. Cold Spring Harb Symp Quant Biol, 44 (1). pp. 493-508.

Liu, J., Valencia-Sanchez, M. A., Hannon, G. J., Parker, R. (2005) MicroRNA-dependent localization of targeted mRNAs to mammalian P-bodies. Nature Cell Biology, 7 (7). pp. 719-23. ISSN 1465-7392

M

Maher, C., Stein, L. D., Ware, D. (2006) Evolution of Arabidopsis microRNA families through duplication events. Genome Res, 16 (4). pp. 510-9. ISSN 1088-9051 (Print)

Mintz, P. J., Patterson, S. D., Neuwald, A. F., Spahr, C. S., Spector, D. L. (1999) Purification and biochemical characterization of interchromatin granule clusters. Embo Journal, 18 (15). pp. 4308-4320. ISSN 0261-4189

P

Pillai-Nair, N., Panicker, A. K., Rodriguiz, R. M., Gilmore, K. L., Demyanenko, G. P., Huang, J. Z., Wetsel, W. C., Maness, P. F. (2005) Neural cell adhesion molecule-secreting transgenic mice display abnormalities in GABAergic interneurons and alterations in behavior. Journal of Neuroscience, 25 (18). pp. 4659-4671. ISSN 0270-6474

R

Regulski, M., Lu, Z., Kendall, J., Donoghue, M. T., Reinders, J., Llaca, V., Deschamps, S., Smith, A., Levy, D., McCombie, W. R., Tingey, S., Rafalski, A., Hicks, J., Ware, D., Martienssen, R. (2013) The maize methylome influences mRNA splice sites and reveals widespread paramutation-like switches guided by small RNA. Genome Research, 23 (10). pp. 1651-1662. ISSN 10889051 (ISSN)

Rial Verde, E. M. , Lee-Osbourne, J., Worley, P. F., Malinow, R., Cline, H. T. (2006) Increased expression of the immediate-early gene arc/arg3.1 reduces AMPA receptor-mediated synaptic transmission. Neuron, 52 (3). pp. 461-74. ISSN 0896-6273 (Print)

Ronemus, M., Vaughn, M. W., Martienssen, R. A. (2006) MicroRNA-targeted and small interfering RNA-mediated mRNA degradation is regulated by argonaute, dicer, and RNA-dependent RNA polymerase in Arabidopsis. Plant Cell, 18 (7). pp. 1559-74. ISSN 1040-4651 (Print)

S

Saavedra, C. A., Hammell, C. M., Heath, C. V., Cole, C. N. (1997) Yeast heat shock mRNAs are exported through a distinct pathway defined by Rip1p. Genes and Development, 11 (21). pp. 2845-2856. ISSN 08909369 (ISSN)

Salamon, H., Kato-Maeda, M., Small, P. M., Drenkow, J., Gingeras, T. R. (2000) Detection of deleted genomic DNA using a semiautomated computational analysis of GeneChip data. Genome Research, 10 (12). pp. 2044-2054. ISSN 10889051 (ISSN)

Shav-Tal, Y., Darzacq, X., Shenoy, S. M., Fusco, D., Janicki, S. M., Spector, D. L., Singer, R. H. (2004) Dynamics of single mRNPs in nuclei of living cells. Science, 304 (5678). pp. 1797-1800. ISSN 0036-8075

Spector, D. L. (1993) Nuclear organization of pre-mRNA processing. Current Opinion in Cell Biology, 5 (3). pp. 442-447. ISSN 0955-0674

Stenlund, A., Zabielski, J., Ahola, H., Moreno-Lopez, J., Pettersson, U. (1985) Messenger RNAs from the transforming region of bovine papilloma virus type I. J Mol Biol, 182 (4). pp. 541-54. ISSN 0022-2836 (Print)0022-2836 (Linking)

Stillman, B. W., Lewis, J. B., Chow, L. T., Mathews, M. B., Smart, J. E. (1981) Identification of the Gene and Messenger-Rna for the Adenovirus Terminal Protein-Precursor. Cell, 23 (2). pp. 497-508. ISSN 0092-8674

T

Tani, T., Derby, R. J., Hiraoka, Y., Spector, D. L. (1995) Nucleolar accumulation of poly (A)+ RNA in heat-shocked yeast cells: implication of nucleolar involvement in mRNA transport. Molecular Biology of the Cell, 6 (11). pp. 1515-34. ISSN 1059-1524

Teta, M., Andl, T., Okegbe, T., Murchison, E. P., Nagy, A., Hannon, G. J., Millar, S. E. (2008) Global changes in mRNA levels and failure of hair follicle stem cell maintenance in adult Dicer-deleted skin. Journal of Investigative Dermatology, 128 (Suppl.). S154-S154. ISSN 0022-202X

Tyson-Capper, A. J., Bailey, J., Krainer, A. R., Robson, S. C., Europe-Finner, G. N. (2005) The switch in alternative splicing of cyclic AMP-response element modulator protein CREM tau(2)alpha (activator) to CREM alpha (repressor) in human myometrial cells is mediated by SRp40. Journal of Biological Chemistry, 280 (41). pp. 34521-34529. ISSN 0021-9258

V

Valencia-Sanchez, M. A., Liu, J., Hannon, G. J., Parker, R. (2006) Control of translation and mRNA degradation by miRNAs and siRNAs. Genes and Development, 20 (5). pp. 515-524. ISSN 08909369

Vaughn, M. W., Martienssen, R. (2005) It's a small RNA world, after all. Science, 309 (5740). pp. 1525-6. ISSN 1095-9203 (Electronic)

Z

Zain, S., Gingeras, T. R., Bullock, P., Wong, G., Gelinas, R. E. (1979) Determination and analysis of adenovirus-2 DNA sequences which may include signals for late messenger RNA processing. Journal of Molecular Biology, 135 (2). pp. 413-433. ISSN 00222836 (ISSN)

Zhang, C., Li, H. R., Fan, J. B., Wang-Rodriguez, J., Downs, T., Fu, X. D., Zhang, M. Q. (2006) Profiling alternatively spliced mRNA isoforms for prostate cancer classification. BMC Bioinformatics, 7. p. 202. ISSN 1471-2105 (Electronic)

Zhang, Z., Krainer, A. R. (2004) Involvement of SR proteins in mRNA surveillance. Molecular Cell, 16 (4). pp. 597-607. ISSN 1097-2765

Zhong, J., Zhang, T., Bloch, L. M. (2006) Dendritic mRNAs encode diversified functionalities in hippocampal pyramidal neurons. BMC Neuroscience, 7. p. 17. ISSN 14712202

Zhu, H., Cong, J. P., Mamtora, G., Gingeras, T. R., Shenk, T. (1998) Cellular gene expression altered by human cytomegalovirus: Global monitoring with oligonucleotide arrays. Proceedings of the National Academy of Sciences of the United States of America, 95 (24). pp. 14470-14475. ISSN 00278424 (ISSN)

Zhu, H., Cong, J. P., Mamtora, G., Gingeras, T. R., Shenk, T. (1998) Use of differential display and dna array technology to assess the effect of human cytomegalovirus infection on signal transduction pathways. Faseb Journal, 12 (8). ISSN 08926638 (ISSN)

This list was generated on Tue Mar 28 09:02:08 2017 EDT.
CSHL HomeAbout CSHLResearchEducationNews & FeaturesCampus & Public EventsCareersGiving