Items where Community is "CSHL labs > Kobayashi lab"

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Paper

Bogenhagen, D. F., Wang, Y. S., Shen, E. L., Kobayashi, R. (2003) Protein components of mitochondrial DNA nucleoids in higher eukaryotes. Molecular & Cellular Proteomics, 2 (11). pp. 1205-1216. ISSN 1535-9476

Nakayama, J., Xiao, G., Noma, K., Malikzay, A., Bjerling, P., Ekwall, K., Kobayashi, R., Grewal, S. I. (2003) Alp13, an MRG family protein, is a component of fission yeast Clr6 histone deacetylase required for genomic integrity. Embo Journal, 22 (11). pp. 2776-87. ISSN 0261-4189

Hu, P., Wu, S., Sun, Y. L., Yuan, C. C., Kobayashi, R., Myers, M. P., Hernandez, N. (2003) A minimal RNA polymerase III transcription system from higher eucaryotic cells. Faseb Journal, 17 (5). A1185-A1185. ISSN 0892-6638

Zheng, J. Y., Yang, X. M., Harrell, J. M., Ryzhikov, S., Shim, E. H., Lykke-Andersen, K., Wei, N., Sun, H., Kobayashi, R., Zhang, H. (2002) CAND1 binds to unneddylated CUL1 and regulates the formation of SCF ubiquitin E3 ligase complex. Molecular Cell, 10 (6). pp. 1519-1526. ISSN 1097-2765

Hu, P., Wu, S., Sun, Y. L., Yuan, C. C., Kobayashi, R., Myers, M. P., Hernandez, N. (2002) Characterization of human RNA polymerase III identifies orthologues for Saccharomyces cerevisiae RNA polymerase III subunits. Molecular and Cellular Biology, 22 (22). pp. 8044-8055. ISSN 0270-7306

Carpino, N., Kobayashi, R., Zang, H., Takahashi, Y., Jou, S. T., Feng, J., Nakajima, H., Ihle, J. N. (2002) Identification, cDNA cloning, and targeted deletion of p70, a novel, ubiquitously expressed SH3 domain-containing protein. Molecular and Cellular Biology, 22 (21). pp. 7491-7500. ISSN 0270-7306

Emili, A., Shales, M., McCracken, S., Xie, W. J., Tucker, P. W., Kobayashi, R., Blencowe, B. J., Ingles, C. J. (2002) Splicing and transcription-associated proteins PSF and p54(nrb)/NonO bind to the RNA polymerase II CTD. RNA, 8 (9). pp. 1102-1111. ISSN 1355-8382

MacCallum, D. E., Losada, A., Kobayashi, R., Hirano, T. (2002) ISWI remodeling complexes in Xenopus egg extracts: Identification as major chromosomal components that are regulated by INCENP-aurora B. Molecular Biology of the Cell, 13 (1). pp. 25-39. ISSN 1059-1524

Tyler, J. K., Collins, K. A., Prasad-Sinha, J., Amiott, E., Bulger, M., Harte, P. J., Kobayashi, R., Kadonaga, J. T. (2001) Interaction between the Drosophila CAF-1 and ASF1 chromatin assembly factors. Molecular and Cellular Biology, 21 (19). pp. 6574-6584. ISSN 0270-7306

Hammond, S. M., Boettcher, S., Caudy, A. A., Kobayashi, R., Hannon, G. J. (2001) Argonaute2, a link between genetic and biochemical analyses of RNAi. Science, 293 (5532). pp. 1146-1150. ISSN 0036-8075

Wysocka, J., Liu, Y., Kobayashi, R., Herr, W. (2001) Developmental and cell-cycle regulation of Caenorhabditis elegans HCF phosphorylation. Biochemistry, 40 (19). pp. 5786-5794. ISSN 0006-2960

Wu, J. S., Carman, A. A., Kobayashi, R., Suka, N., Grunstein, M. (2001) HDA2 and HDA3 are related proteins that interact with and are essential for the activity of the yeast histone deacetylase HDA1. Proceedings of the National Academy of Sciences of the United States of America, 98 (8). pp. 4391-4396. ISSN 0027-8424

Willy, P. J., Kobayashi, R., Kadonaga, J. T. (2000) A basal transcription factor that activates or represses transcription. Science, 290 (5493). pp. 982-984. ISSN 0036-8075

Losada, A., Yokochi, T., Kobayashi, R., Hirano, T. (2000) Identification and characterization of SA/Scc3p subunits in the Xenopus and human cohesin complexes. Journal of Cell Biology, 150 (3). pp. 405-416. ISSN 0021-9525

Zelko, I., Kobayashi, R., Negishi, M. (2000) Repression of phenobarbital-responsive enhancer module in the Cyp2b10 gene by estrogen receptor-related receptor ERR. Faseb Journal, 14 (8). A1433-A1433. ISSN 0892-6638

Dallas, P. B., Pacchione, S., Wilsker, D., Bowrin, V., Kobayashi, R., Moran, E. (2000) The human SWI-SNF complex protein p270 is an ARID family member with non-sequence-specific DNA binding activity. Molecular and Cellular Biology, 20 (9). pp. 3137-3146. ISSN 0270-7306

Kashige, N., Carpino, N., Kobayashi, R. (2000) Tyrosine phosphorylation of p62(dok) by p210(bcr-abl) inhibits RasGAP activity. Proceedings of the National Academy of Sciences of the United States of America, 97 (5). pp. 2093-2098. ISSN 0027-8424

Mayeda, A., Badolato, J., Kobayashi, R., Zhang, M. Q., Gardiner, E. M., Krainer, A. R. (1999) Purification and characterization of human RNPS1: a general activator of pre-mRNA splicing. EMBO Journal, 18 (16). pp. 4560-4570. ISSN 0261-4189

Zhang, S. H., Liu, J. P., Kobayashi, R., Tonks, N. K. (1999) Identification of the cell cycle regulator VCP (p97/CDC48) as a substrate of the band 4.1-related protein-tyrosine phosphatase PTPH1. Journal of Biological Chemistry, 274 (25). pp. 17806-17812. ISSN 0021-9258

Lopato, S., Kalyna, M., Dorner, S., Kobayashi, R., Krainer, A. R., Barta, A. (1999) atSRp30, one of two SF2/ASF-like proteins from Arabidopsis thaliana, regulates splicing of specific plant genes. Genes & Development, 13 (8). pp. 987-1001. ISSN 0890-9369

Chen, C. D., Kobayashi, R., Helfman, D. M. (1999) Binding of hnRNP H to an exonic splicing silencer is involved in the regulation of alternative splicing of the rat beta-tropomyosin gene. Genes and Development, 13 (5). pp. 593-606. ISSN 0890-9369 (Print)

Murray, M. V., Kobayashi, R., Krainer, A. R. (1999) The type 2C Ser/Thr phosphatase PP2C gamma is a pre-mRNA splicing factor. Genes & Development, 13 (1). pp. 87-97. ISSN 0890-9369

Tugal, T., Zou-Yang, X. H., Gavin, K., Pappin, D., Canas, B., Kobayashi, R., Hunt, T., Stillman, B. (1998) The Orc4p and Orc5p Subunits of the Xenopus and Human Origin Recognition Complex Are Related to Orc1p and Cdc6p. Journal of Biological Chemistry, 273 (49). pp. 32421-32429. ISSN 0021-9258

Kimura, K., Hirano, M., Kobayashi, R., Hirano, T. (1998) Phosphorylation and activation of 13S condensin by Cdc2 in vitro. Science, 282 (5388). pp. 487-90. ISSN 0036-8075 (Print)

Henry, R. W., Mittal, V., Ma, B., Kobayashi, R., Hernandez, N. (1998) SNAP19 mediates the assembly of a functional core promoter complex (SNAPc) shared by RNA polymerases II and III. Genes and Development, 12 (17). pp. 2664-72. ISSN 08909369 (ISSN)

Liao, H. J., Kobayashi, R., Mathews, M. B. (1998) Activities of adenovirus virus-associated RNAs: purification and characterization of RNA binding proteins. Proceedings of the National Academy of Sciences, 95 (15). pp. 8514-9. ISSN 0027-8424 (Print)

Grossman, J. S., Meyer, M. I., Wang, Y. C., Mulligan, G. J., Kobayashi, R., Helfman, D. M. (1998) The use of antibodies to the polypyrimidine tract binding protein (PTB) to analyze the protein components that assemble on alternatively spliced pre-mRNAs that use distant branch points. Rna, 4 (6). pp. 613-25. ISSN 1355-8382 (Print)

Wong, M. W., Henry, R. W., Ma, B., Kobayashi, R., Klages, N., Matthias, P., Strubin, M., Hernandez, N. (1998) The large subunit of basal transcription factor SNAPc is a Myb domain protein that interacts with Oct-1. Molecular and Cellular Biology, 18 (1). pp. 368-77. ISSN 0270-7306 (Print)

Horowitz, D. S., Kobayashi, R., Krainer, A. R. (1997) A new cyclophilin and the human homologues of yeast Prp3 and Prp4 form a complex associated with U4/U6 snRNPs. Rna-a Publication of the Rna Society, 3 (12). pp. 1374-1387. ISSN 1355-8382

Zhang, S. H., Kobayashi, R., Graves, P. R., Piwnica-Worms, H., Tonks, N. K. (1997) Serine phosphorylation-dependent association of the band 4.1-related protein-tyrosine phosphatase PTPH1 with 14-3-3 beta protein. Journal of Biological Chemistry, 272 (43). pp. 27281-27287. ISSN 0021-9258

O'Gara, M., Adams, G. M., Gong, W., Kobayashi, R., Blumenthal, R. M., Cheng, X. (1997) Expression, purification, mass spectrometry, crystallization and multiwavelength anomalous diffraction of selenomethionyl PvuII DNA methyltransferase (cytosine-N4-specific). European Journal of Biochemistry , 247 (3). pp. 1009-18. ISSN 0014-2956 (Print)

Hirano, T., Kobayashi, R., Hirano, M. (1997) Condensins, chromosome condensation protein complexes containing XCAP-C, XCAP-E and a Xenopus homolog of the Drosophila Barren protein. Cell, 89 (4). pp. 511-21. ISSN 0092-8674 (Print)

Brand, S. R., Kobayashi, R., Mathews, M. B. (1997) The Tat protein of human immunodeficiency virus type 1 is a substrate and inhibitor of the interferon-induced, virally activated protein kinase, PKR. Journal of Biological Chemistry, 272 (13). pp. 8388-95. ISSN 0021-9258

Gimona, M., Lando, Z., Dolginov, Y., Vandekerckhove, J., Kobayashi, R., Sobieszek, A., Helfman, D. M. (1997) Ca2+-dependent interaction of S100A2 with muscle and nonmuscle tropomyosins. Journal of Cell Science, 110 ( . pp. 611-21. ISSN 0021-9533

Carpino, N., Wisniewski, D., Strife, A., Marshak, D., Kobayashi, R., Stillman, B., Clarkson, B. (1997) p62(dok): a constitutively tyrosine-phosphorylated, GAP-associated protein in chronic myelogenous leukemia progenitor cells. Cell, 88 (2). pp. 197-204. ISSN 0092-8674 (Print)

Henry, R. W., Ma, B., Sadowski, C. L., Kobayashi, R., Hernandez, N. (1996) Cloning and characterization of SNAP50, a subunit of the snRNA-activating protein complex SNAPc. Embo J, 15 (24). pp. 7129-36. ISSN 0261-4189 (Print)

Mital, R., Kobayashi, R., Hernandez, N. (1996) RNA polymerase III transcription from the human U6 and adenovirus type 2 VAI promoters has different requirements for human BRF, a subunit of human TFIIIB. Molecular and Cellular Biology, 16 (12). pp. 7031-42. ISSN 0270-7306

Verreault, A., Kaufman, P. D., Kobayashi, R., Stillman, B. (1996) Nucleosome assembly by a complex of CAF-1 and acetylated histones H3/H4. Cell, 87 (1). pp. 95-104. ISSN 0092-8674 (Print)

Watakabe, A., Kobayashi, R., Helfman, D. M. (1996) N-tropomodulin: a novel isoform of tropomodulin identified as the major binding protein to brain tropomyosin. Journal of Cell Science, 109 (Pt 9). pp. 2299-310. ISSN 0021-9533

Luke, M. M., Della Seta, F., Di Como, C. J., Sugimoto, H., Kobayashi, R., Arndt, K. T. (1996) The SAP, a new family of proteins, associate and function positively with the SIT4 phosphatase. Molecular and Cellular Biology, 16 (6). pp. 2744-55. ISSN 0270-7306

Sadowski, C. L., Henry, R. W., Kobayashi, R., Hernandez, N. (1996) The SNAP45 subunit of the small nuclear RNA (snRNA) activating protein complex is required for RNA polymerase II and III snRNA gene transcription and interacts with the TATA box binding protein. Proceedings of the National Academy of Sciences, 93 (9). pp. 4289-93. ISSN 0027-8424 (Print)

Zhang, H., Kobayashi, R., Galaktionov, K., Beach, D. (1995) p19Skp1 and p45Skp2 are essential elements of the cyclin A-CDK2 S phase kinase. Cell, 82 (6). pp. 915-25. ISSN 0092-8674 (Print)

Cullmann, G., Fien, K., Kobayashi, R., Stillman, B. (1995) Characterization of the five replication factor C genes of Saccharomyces cerevisiae. Molecular and Cellular Biology, 15 (9). pp. 4661-71. ISSN 0270-7306

Kaufman, P. D., Kobayashi, R., Kessler, N., Stillman, B. (1995) The p150 and p60 subunits of chromatin assembly factor I: a molecular link between newly synthesized histones and DNA replication. Cell, 81 (7). pp. 1105-14. ISSN 0092-8674 (Print)

Henry, R. W., Sadowski, C. L., Kobayashi, R., Hernandez, N. (1995) A TBP-TAF complex required for transcription of human snRNA genes by RNA polymerase II and III. Nature, 374 (6523). pp. 653-6. ISSN 0028-0836 (Print)

Garrels, J. I., Futcher, B., Kobayashi, R., Latter, G. I., Schwender, B., Volpe, T., Warner, J. R., McLaughlin, C. S. (1994) Protein identifications for a Saccharomyces cerevisiae protein database. Electrophoresis, 15 (11). pp. 1466-86.

Bell, S. P., Kobayashi, R., Stillman, B. (1994) Transcriptional Silencing, DNA-Replication, and the Yeast Origin Recognition Complex. Journal of Cellular Biochemistry, 56 (S18C). p. 82. ISSN 0730-2312

Dong, B. H., Horowitz, D. S., Kobayashi, R., Krainer, A. R. (1993) Purification and cDNA cloning of HeLa cell p54nrb, a nuclear protein with two RNA recognition motifs and extensive homology to human splicing factor PSF and Drosophila NONA/BJ6. Nucleic Acids Research, 21 (17). pp. 4085-4092. ISSN 0305-1048

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