Browse by CSHL Author

Paper

Yuan, Li, Chen, Xiaoyin, Zhan, Huiqing, Henry, Gilbert L, Zador, Anthony M (September 2024) Massive multiplexing of spatially resolved single neuron projections with axonal BARseq. Nature Communications, 15 (1). p. 8371. ISSN 2041-1723 (Public Dataset)

Banerjee, Arkarup, Isko, Emily, Harpole, Clifford, Zheng, Xiaoyue, Zhan, Huiqing, Davis, Martin, Zador, Anthony (September 2024) Selective expansion of motor cortical projections in the evolution of vocal novelty. bioRxiv. ISSN 2692-8205 (Submitted)

Zeisler, Zachary R, London, Liza, Janssen, William G, Fredericks, J Megan, Elorette, Catherine, Fujimoto, Atsushi, Zhan, Huiqing, Russ, Brian E, Clem, Roger L, Hof, Patrick R, Stoll, Frederic M, Rudebeck, Peter H (October 2023) Single basolateral amygdala neurons in macaques exhibit distinct connectional motifs with frontal cortex. Neuron, 111 (20). 3307-3320.e5. ISSN 0896-6273

Zeisler, Zachary R, London, Liza, Janssen, William G, Fredericks, J Megan, Elorette, Catherine, Fujimoto, Atsushi, Zhan, Huiqing, Russ, Brian E, Clem, Roger L, Hof, Patrick R, Stoll, Frederic M, Rudebeck, Peter H (February 2023) High-throughput sequencing of macaque basolateral amygdala projections reveals dissociable connectional motifs with frontal cortex. bioRxiv.

Yuan, Li, Chen, Xiaoyin, Zhan, Huiqing, Gilbert, Henry L, Zador, Anthony M (February 2023) Massive Multiplexing of Spatially Resolved Single Neuron Projections with Axonal BARseq. bioRxiv. (Submitted)

Chen, Yushu, Chen, Xiaoyin, Baserdem, Batuhan, Zhan, Huiqing, Li, Yan, Davis, Martin B, Kebschull, Justus M, Zador, Anthony M, Koulakov, Alexei A, Albeanu, Dinu F (October 2022) High-throughput sequencing of single neuron projections reveals spatial organization in the olfactory cortex. Cell, 185 (22). 4117-4134.e28. ISSN 0092-8674

Hausmann, Frances S, Barrett, John M, Martin, Megan E, Zhan, Huiqing, Shepherd, Gordon MG (October 2022) Axonal Barcode Analysis of Pyramidal Tract Projections from Mouse Forelimb M1 and M2. The Journal of Neuroscience, 42 (41). pp. 7733-7743. ISSN 0270-6474

Muñoz-Castañeda, Rodrigo, Zingg, Brian, Matho, Katherine S, Chen, Xiaoyin, Wang, Quanxin, Foster, Nicholas N, Li, Anan, Narasimhan, Arun, Hirokawa, Karla E, Huo, Bingxing, Bannerjee, Samik, Korobkova, Laura, Park, Chris Sin, Park, Young-Gyun, Bienkowski, Michael S, Chon, Uree, Wheeler, Diek W, Li, Xiangning, Wang, Yun, Naeemi, Maitham, Xie, Peng, Liu, Lijuan, Kelly, Kathleen, An, Xu, Attili, Sarojini M, Bowman, Ian, Bludova, Anastasiia, Cetin, Ali, Ding, Liya, Drewes, Rhonda, D'Orazi, Florence, Elowsky, Corey, Fischer, Stephan, Galbavy, William, Gao, Lei, Gillis, Jesse, Groblewski, Peter A, Gou, Lin, Hahn, Joel D, Hatfield, Joshua T, Hintiryan, Houri, Huang, Junxiang Jason, Kondo, Hideki, Kuang, Xiuli, Lesnar, Philip, Li, Xu, Li, Yaoyao, Lin, Mengkuan, Lo, Darrick, Mizrachi, Judith, Mok, Stephanie, Nicovich, Philip R, Palaniswamy, Ramesh, Palmer, Jason, Qi, Xiaoli, Shen, Elise, Sun, Yu-Chi, Tao, Huizhong W, Wakemen, Wayne, Wang, Yimin, Yao, Shenqin, Yuan, Jing, Zhan, Huiqing, Zhu, Muye, Ng, Lydia, Zhang, Li I, Lim, Byung Kook, Hawrylycz, Michael, Gong, Hui, Gee, James C, Kim, Yongsoo, Chung, Kwanghun, Yang, X William, Peng, Hanchuan, Luo, Qingming, Mitra, Partha P, Zador, Anthony M, Zeng, Hongkui, Ascoli, Giorgio A, Josh Huang, Z, Osten, Pavel, Harris, Julie A, Dong, Hong-Wei (October 2021) Cellular anatomy of the mouse primary motor cortex. Nature, 598 (7879). pp. 159-166. ISSN 0028-0836

Sun, Yu-Chi, Chen, Xiaoyin, Fischer, Stephan, Lu, Shaina, Zhan, Huiqing, Gillis, Jesse, Zador, Anthony M (May 2021) Integrating barcoded neuroanatomy with spatial transcriptional profiling enables identification of gene correlates of projections. Nature Neuroscience. ISSN 1097-6256

Chen, Yushu, Chen, Xiaoyin, Baserdem, Batuhan, Zhan, Huiqing, Li, Yan, Davis, Martin, Kebschull, Justus, Zador, Anthony, Koulakov, Alexei, Albeanu, Dinu (2021) Wiring logic of the early rodent olfactory system revealed by high-throughput sequencing of single neuron projections. bioRxiv. (Submitted)

Dore, K., Pao, Y., Soria Lopez, J., Aronson, S., Zhan, H., Ghosh, S., Merrill, S., Zador, A. M., Malinow, R., Kebschull, J. M. (January 2020) SYNPLA, a method to identify synapses displaying plasticity after learning. Proc Natl Acad Sci U S A, 117 (6). pp. 3214-3219. ISSN 0027-8424 (Public Dataset)

Chen, X., Sun, Y. C., Zhan, H., Kebschull, J. M., Fischer, S., Matho, K., Huang, Z. J., Gillis, J., Zador, A. M. (October 2019) High-Throughput Mapping of Long-Range Neuronal Projection Using In Situ Sequencing. Cell, 179 (3). 772-786.e19. ISSN 0092-8674 (Public Dataset)

Chen, Xiaoyin, Sun, Yu-Chi, Zhan, Huiqing, Kebschull, Justus, Fischer, Stephan, Matho, Katherine, Josh Huang, Z, Gillis, Jesse, Zador, Anthony (July 2019) High-throughput mapping of long-range neuronal projection using <i>in situ</i> sequencing. BioRxiv. (Unpublished)

Li, Zhen, Zheng, Weiling, Wang, Zhengyuan, Zeng, Zhiqiang, Zhan, Huiqing, Li, Caixia, Zhou, Li, Yan, Chuan, Spitsbergen, Jan M, Gong, Zhiyuan (March 2013) A transgenic zebrafish liver tumor model with inducible Myc expression reveals conserved Myc signatures with mammalian liver tumors. DMM Disease Models and Mechanisms, 6 (2). pp. 414-423. ISSN 1754-8403

Zador, A. M., Dubnau, J., Oyibo, H. K., Zhan, H., Cao, G., Peikon, I. D. (October 2012) Sequencing the Connectome. PLoS Biology, 10 (10). ISSN 1544-9173

Li, Zhen, Huang, Xiaoqian, Zhan, Huiqing, Zeng, Zhiqiang, Li, Caixia, Spitsbergen, Jan M, Meierjohann, Svenja, Schartl, Manfred, Gong, Zhiyuan (February 2012) Inducible and repressable oncogene-addicted hepatocellular carcinoma in Tet-on xmrk transgenic zebrafish. Journal of Hepatology, 56 (2). pp. 419-425. ISSN 0168-8278

He, Shuning, Krens, Sf Gabby, Zhan, Huiqing, Gong, Zhiyuan, Hogendoorn, Pancras Cw, Spaink, Herman P, Snaar-Jagalska, B Ewa (September 2011) A ΔRaf1-ER-inducible oncogenic zebrafish liver cell model identifies hepatocellular carcinoma signatures. Journal of Pathology, 225 (1). pp. 19-28. ISSN 0022-3417

Paul, Thomas A, Rovnak, Joel, Quackenbush, Sandra L, Whitlock, Kathleen, Zhan, Huiqing, Gong, Zhiyuan, Spitsbergen, Jan, Bowser, Paul R, Casey, James W (April 2011) Transgenic expression of walleye dermal sarcoma virus rv-cyclin (orfA) in zebrafish does not result in tissue proliferation. Marine Biotechnology, 13 (2). pp. 142-150. ISSN 1436-2228

Mirbahai, Leda, Williams, Timothy D, Zhan, Huiqing, Gong, Zhiyuan, Chipman, J Kevin (January 2011) Comprehensive profiling of zebrafish hepatic proximal promoter CpG island methylation and its modification during chemical carcinogenesis. BMC Genomics, 12 (1). p. 3. ISSN 1471-2164

Zhan, Huiqing, Spitsbergen, Jan M, Qing, Wei, Wu, Yi Lian, Paul, Thomas A, Casey, James W, Her, Guor Muor, Gong, Zhiyuan (November 2010) Transgenic Expression of Walleye Dermal Sarcoma Virus rv-cyclin Gene in Zebrafish and Its Suppressive Effect on Liver Tumor Development After Carcinogen Treatment. Marine Biotechnology, 12 (6). pp. 640-649. ISSN 1436-2228

Zhan, Huiqing, Gong, Zhiyuan (February 2010) Delayed and Restricted Expression of UAS-Regulated GFP Gene in Early Transgenic Zebrafish Embryos by Using the GAL4/UAS System. Marine Biotechnology, 12 (1). pp. 1-7. ISSN 1436-2228

Pan, Xiufang, Zhan, Huiqing, Gong, Zhiyuan (2008) Ornamental expression of red fluorescent protein in transgenic founders of white skirt tetra (Gymnocorymbus ternetzi). Marine Biotechnology, 10 (5). pp. 497-501. ISSN 1436-2228

Lam, Siew Hong, Wu, Yi Lian, Vega, Vinsensius B, Miller, Lance D, Spitsbergen, Jan, Tong, Yan, Zhan, Huiqing, Govindarajan, Kunde R, Lee, Serene, Mathavan, Sinnakarupan, Murthy, Karuturi R Krishna, Buhler, Donald R, Liu, Edison T, Gong, Zhiyuan (January 2006) Conservation of gene expression signatures between zebrafish and human liver tumors and tumor progression. Nature Biotechnology, 24 (1). pp. 73-75. ISSN 1087-0156

Conference or Workshop Item

Chen, Yushu, Chen, Xiaoyin, Baserdem, Batuhan, Zhan, Huiqing, Li, Yan, Davis, Martin B, Kebschull, Justus M, Zador, Anthony M, Koulakov, Alexei A, Albeanu, Dinu F (2022) High-throughput sequencing of olfactory single neuron projections reveals non-random spatial organization. In: 44th Annual Meeting of the Association-for-Chemoreception-Sciences.