Ballouz, Sara Publications

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Ballouz, Sara

Number of items at this level: 12.

Paper

Ballouz, S., Weber, M., Pavlidis, P., Gillis, J. (2017) EGAD: ultra-fast functional analysis of gene networks. Bioinformatics, 33 (4). pp. 612-614. ISSN 1367-4803

Ballouz, S., Pavlidis, P., Gillis, J. (2016) Using predictive specificity to determine when gene set analysis is biologically meaningful. Nucleic Acids Res. ISSN 1362-4962 (Electronic)0305-1048 (Linking)

Crow, M., Paul, A., Ballouz, S., Huang, Z. J., Gillis, J. (2016) Exploiting single-cell expression to characterize co-expression replicability. Genome Biol, 17 (1). p. 101. ISSN 1474-760X (Electronic)1474-7596 (Linking)

Ballouz, S., Gillis, J. (2016) AuPairWise: A Method to Estimate RNA-Seq Replicability through Co-expression. PLoS Comput Biol, 12 (4). e1004868. ISSN 1553-7358 (Electronic)1553-734X (Linking)

Verleyen, W., Ballouz, S., Gillis, J. (2016) Positive and negative forms of replicability in gene network analysis. Bioinformatics, 32 (7). pp. 1065-73. ISSN 1367-4811 (Electronic)1367-4803 (Linking)

O'Meara, M. J., Ballouz, S., Shoichet, B. K., Gillis, J. (2016) Ligand Similarity Complements Sequence, Physical Interaction, and Co-Expression for Gene Function Prediction. PLoS One, 11 (7). e0160098. ISSN 1932-6203 (Electronic)1932-6203 (Linking)

Grover, M. P., Ballouz, S., Mohanasundaram, K. A., George, R. A., Goscinski, A., Crowley, T. M., Sherman, C. D., Wouters, M. A. (2015) Novel therapeutics for coronary artery disease from genome-wide association study data. BMC Med Genomics, 8 (Suppl ). S1. ISSN 1755-8794 (Electronic)1755-8794 (Linking)

Verleyen, W., Ballouz, S., Gillis, J. (2015) Measuring the wisdom of the crowds in network-based gene function inference. Bioinformatics, 31 (5). pp. 745-752. ISSN 1367-4803

Ballouz, S., Verleyen, W., Gillis, J. (2015) Guidance for RNA-seq co-expression network construction and analysis: safety in numbers. Bioinformatics. ISSN 1367-4803

Gillis, J., Ballouz, S., Pavlidis, P. (2014) Bias tradeoffs in the creation and analysis of protein-protein interaction networks. Journal of Proteomics, 100. pp. 44-54.

Grover, M. P., Ballouz, S., Mohanasundaram, K. A., George, R. A., H Sherman, C. D., Crowley, T. M., Wouters, M. A. (2014) Identification of novel therapeutics for complex diseases from genome-wide association data. BMC Medical Genomics, 7 (SUPPL.). ISSN 17558794 (ISSN)

Ballouz, S., Liu, J. Y., George, R. A., Bains, N., Liu, A., Oti, M., Gaeta, B., Fatkin, D., Wouters, M. A. (2013) Gentrepid V2.0: a web server for candidate disease gene prediction. BMC Bioinformatics, 14. ISSN 1471-2105

This list was generated on Mon May 29 00:34:04 2017 EDT.
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