Items where Subject is "neuroanatomy"

Paper

Chen, Yuncong, McElvain, Lauren, Tolpygo, Alex, Ferrante, Daniel, Karten, Harvey, Mitra, Partha, Kleinfeld, David, Freund, Yoav (February 2017) The Active Atlas: Combining 3D Anatomical Models with Texture Detectors. arXiv. (Submitted)

Chen, X., Sun, Y. C., Zhan, H., Kebschull, J. M., Fischer, S., Matho, K., Huang, Z. J., Gillis, J., Zador, A. M. (October 2019) High-Throughput Mapping of Long-Range Neuronal Projection Using In Situ Sequencing. Cell, 179 (3). 772-786.e19. ISSN 0092-8674 (Public Dataset)

Engel, Tatiana A, Schölvinck, Marieke L, Lewis, Christopher M (October 2021) The diversity and specificity of functional connectivity across spatial and temporal scales. NeuroImage, 245. p. 118692. ISSN 1053-8119

Gegenhuber, B, Wu, MV, Bronstein, R, Tollkuhn, J (May 2022) Gene regulation by gonadal hormone receptors underlies brain sex differences. Nature. ISSN 0028-0836

Grange, Pascal, Bohland, Jason, Bokil, Hemant, Nelson, Sacha, Okaty, Benjamin, Sugino, Ken, Ng, Lydia, Hawrylycz, Michael, Mitra, Partha P (November 2011) A cell-type based model explaining co-expression patterns of genes in the brain. (Submitted)

Grange, Pascal, Hawrylycz, Michael, Mitra, Partha P (February 2013) Cell-type-specific microarray data and the Allen atlas: quantitative analysis of brain-wide patterns of correlation and density. (Submitted)

Grange, Pascal, Hawrylycz, Michael, Mitra, Partha P (January 2013) Computational neuroanatomy and co-expression of genes in the adult mouse brain, analysis tools for the Allen Brain Atlas. (Submitted)

Grange, Pascal, Mitra, Partha P (April 2011) Algorithmic choice of coordinates for injections into the brain: encoding a neuroanatomical atlas on a grid. (Submitted)

Grange, Pascal, Mitra, Partha P (May 2012) Computational neuroanatomy and gene expression: optimal sets of marker genes for brain regions. (Submitted)

La Manno, Gioele, Siletti, Kimberly, Furlan, Alessandro, Gyllborg, Daniel, Vinsland, Elin, Mossi Albiach, Alejandro, Mattsson Langseth, Christoffer, Khven, Irina, Lederer, Alex R, Dratva, Lisa M, Johnsson, Anna, Nilsson, Mats, Lönnerberg, Peter, Linnarsson, Sten (July 2021) Molecular architecture of the developing mouse brain. Nature. ISSN 0028-0836

Lee, Brian C, Lin, Meng Kuan, Fu, Yan, Hata, Junichi, Miller, Michael I, Mitra, Partha P (May 2018) Multimodal Cross-registration and Quantification of Metric Distortions in Whole Brain Histology of Marmoset using Diffeomorphic Mappings. (Submitted)

Lu, Shaina, Ortiz, Cantin, Fürth, Daniel, Fischer, Stephan, Meletis, Konstantinos, Zador, Anthony, Gillis, Jesse (July 2021) Assessing the replicability of spatial gene expression using atlas data from the adult mouse brain. PLoS Biology, 19 (7). e3001341. ISSN 1545-7885

Mitra, Partha P (October 2005) Bending a slab of neural tissue. (Submitted)

Rockland, K. S., DeFelipe, J. (June 2016) Editorial: Neuroanatomy for the XXIst Century. Frontiers in Neuroanatomy, 10. ISSN 1662-5129

Sun, Yu-Chi, Chen, Xiaoyin, Fischer, Stephan, Lu, Shaina, Gillis, Jesse, Zador, Anthony (August 2020) Integrating barcoded neuroanatomy with spatial transcriptional profiling reveals cadherin correlates of projections shared across the cortex. bioRxiv. (Unpublished)

Yang, Huan, Zeng, Qiong, Silverman, Harold A, Gunasekaran, Manojkumar, George, Sam J, Devarajan, Alex, Addorisio, Meghan E, Li, Jianhua, Tsaava, Téa, Shah, Vivek, Billiar, Timothy R, Wang, Haichao, Brines, Michael, Andersson, Ulf, Pavlov, Valentin A, Chang, Eric H, Chavan, Sangeeta S, Tracey, Kevin J (August 2021) HMGB1 released from nociceptors mediates inflammation. Proceedings of the National Academy of Sciences of USA, 118 (33). e2102034118-e2102034118. ISSN 0027-8424

Conference or Workshop Item

Bonda, David, Wulf, Michael, Kepecs, Adam (December 2020) A Functional Circuit for Executive Control. In: Congress of Neurological Surgeons 2020.

Tward, DJ, Lee, B, Mitra, P, Miller, MI (July 2017) Performance of image matching in the computational anatomy gateway: CPU and GPU implementations in opencl. In: PEARC17: Proceedings of the Practice and Experience in Advanced Research Computing 2017 on Sustainability, Success and Impact.

Thesis

Corona, Alberto (March 2023) Sex-dependent neural activity underlying parenting behavior in mice. PhD thesis, Cold Spring Harbor Laboratory.

Pai, S. S. (January 2010) Neuroanatomical Localization of Timing-Specific Brain Loci in the Rat. PhD thesis, Cold Spring Harbor Laboratory.