Items where Community is "Pedmale lab"

Paper

Mohanasundaram, Boominathan, Palit, Shirsa, Bhide, Amey J, Pala, Madhusmita, Rajoria, Kanishka, Girigosavi, Payal, Banerjee, Anjan K (February 2024) PpSCARECROW1 (PpSCR1) regulates leaf blade and mid-vein development in Physcomitrium patens. Plant Molecular Biology, 114 (1). ISSN 0167-4412 (Public Dataset)

Norén Lindbäck, Louise, Ji, Yan, Cervela-Cardona, Luis, Jin, Xu, Pedmale, Ullas V, Strand, Åsa (August 2023) An interplay between bZIP16, bZIP68, and GBF1 regulates nuclear photosynthetic genes during photomorphogenesis in Arabidopsis. New Phytologist. ISSN 0028-646X

Artz, Oliver, Ackermann, Amanda, Taylor, Laura, Koo, Peter K, Pedmale, Ullas V (January 2023) Light and temperature regulate m6A-RNA modification to regulate growth in plants. bioRxiv. (Submitted)

Hu, Yuzhao, Rosado, Daniele, Lindb Ck, Louise N, Micko, Julie, Pedmale, Ullas V (January 2023) Cryptochromes and UBP12/13 deubiquitinases antagonistically regulate DNA damage response in Arabidopsis. bioRxiv. (Submitted)

Auguste, Yohan SS, Ferro, Austin, Kahng, Jessica A, Xavier, Andre M, Dixon, Jessica R, Vrudhula, Uma, Nichitiu, Anne-Sarah, Rosado, Daniele, Wee, Tse-Luen, Pedmale, Ullas V, Cheadle, Lucas (September 2022) Oligodendrocyte precursor cells engulf synapses during circuit remodeling in mice. Nature Neuroscience. ISSN 1097-6256

Corcoran, Emma Tung, LeBlanc, Chantal, Huang, Yi-Chun, Tsang, Mia Arias, Sarkiss, Anthony, Hu, Yuzhao, Pedmale, Ullas V, Jacob, Yannick (July 2022) Systematic histone H4 replacement in Arabidopsis thaliana reveals a role for H4R17 in regulating flowering time. The Plant Cell. koac211. ISSN 1040-4651

Lindbäck, Louise N, Hu, Yuzhao, Ackermann, Amanda, Artz, Oliver, Pedmale, Ullas V (June 2022) UBP12 and UBP13 deubiquitinases destabilize the CRY2 blue light receptor to regulate Arabidopsis growth. Current Biology. ISSN 0960-9822

Elbl, Paula M, de Souza, Diego T, Rosado, Daniele, de Oliveira, Leandro F, Navarro, Bruno V, Matioli, Sergio R, Floh, Eny IS (January 2022) Building an embryo: An auxin gene toolkit for zygotic and somatic embryogenesis in Brazilian pine. Gene, 817. p. 146168. ISSN 0378-1119

Rosado, Daniele, Ackermann, Amanda, Spassibojko, Olya, Rossi, Magdalena, Pedmale, Ullas V (October 2021) WRKY transcription factors and ethylene signaling modify root growth during the shade avoidance response. Plant Physiology. ISSN 1532-2548

Norén Lindbäck, Louise, Artz, Oliver, Ackermann, Amanda, Pedmale, Ullas V (April 2021) UBP12 and UBP13 deubiquitinases destabilize the CRY2 blue-light receptor to regulate growth. bioRxiv. (Submitted)

Rosado, Daniele, Ackermann, Amanda, Spassibojko, Olya, Rossi, Magdalena, Pedmale, Ullas (2021) Shade-induced WRKY transcription factors restrict root growth during the shade avoidance response. bioRxiv. (Submitted)

Parry, G, Provart, NJ, Brady, SM, Uzilday, B, Adams, K, Araújo, W, Aubourg, S, Baginsky, S, Bakker, E, Bärenfaller, K, Batley, J, Beale, M, Beilstein, M, Belkhadir, Y, Mendel, G, Berardini, T, Bergelson, J, Blanco-Herrera, F, Brady, S, Braun, HP, Briggs, S, Brownfield, L, Cardarelli, M, Castellanos-Uribe, M, Coruzzi, G, Dassanayake, M, De Jaeger, G, Dilkes, B, Doherty, C, Ecker, J, Edger, P, Edwards, D, El Kasmi, F, Eriksson, M, Exposito-Alonso, M, Falter-Braun, P, Fernie, A, Ferro, M, Fiehn, O, Friesner, J, Greenham, K, Guo, Y, Hamann, T, Hancock, A, Hauser, MT, Heazlewood, J, Ho, CH, Hõrak, H, Huala, E, Hwang, I, Iuchi, S, Jaiswal, P, Jakobson, L, Jiang, Y, Jiao, Y, Jones, A, Kadota, Y, Khurana, J, Kliebenstein, D, Knee, E, Kobayashi, M, Koch, M, Krouk, G, Larson, T, Last, R, Lepiniec, L, Li, S, Lurin, C, Lysak, M, Maere, S, Malinowski, R, Maumus, F, May, S, Mayer, K, Mendoza-Cozatl, D, Mendoza-Poudereux, I, Micol, JL, Millar, H, Mock, HP, Mukhtar, K, Mukhtar, S, Murcha, M, Nakagami, H, Nakamura, Y, Nicolov, L, Nikolau, B, Nowack, M, Nunes-Nesi, A, Palmgren, M, Parry, G, Patron, N, Peck, S, Pedmale, U, Perrot-Rechenmann, C, Pieruschka, R, Pío-Beltrán, J, Pires, JC, Provart, N, Rajjou, L, Reiser, L (July 2020) Current status of the multinational Arabidopsis community. Plant Direct, 4 (7). ISSN 2475-4455

Burko, Y., Seluzicki, A., Zander, M., Pedmale, U., Ecker, J.R., Chory, J. (February 2020) Chimeric Activators and Repressors Define HY5 Activity and Reveal a Light-Regulated Feedback Mechanism. Plant Cell. ISSN 1040-4651

Conn, A., Pedmale, U. V., Chory, J., Navlakha, S. (July 2017) High-Resolution Laser Scanning Reveals Plant Architectures that Reflect Universal Network Design Principles. Cell Syst, 5 (1). 53-62.e3. ISSN 2405-4712 (Print)2405-4712

Pedmale, U. V., Huang, S. S., Zander, M., Cole, B. J., Hetzel, J., Ljung, K., Reis, P. A., Sridevi, P., Nito, K., Nery, J. R., Ecker, J. R., Chory, J. (January 2016) Cryptochromes Interact Directly with PIFs to Control Plant Growth in Limiting Blue Light. Cell, 164 (1-2). pp. 233-45. ISSN 0092-8674

Kaiserli, E., Paldi, K., O'Donnell, L., Batalov, O., Pedmale, U. V., Nusinow, D. A., Kay, S. A., Chory, J. (November 2015) Integration of Light and Photoperiodic Signaling in Transcriptional Nuclear Foci. Dev Cell, 35 (3). pp. 311-21. ISSN 1534-5807

Li, L., Zhang, Q., Pedmale, U. V., Nito, K., Fu, W., Lin, L., Hazen, S. P., Chory, J. (October 2014) PIL1 participates in a negative feedback loop that regulates its own gene expression in response to shade. Mol Plant, 7 (10). pp. 1582-5. ISSN 1674-2052

Li, L., Ljung, K., Breton, G., Schmitz, R. J., Pruneda-Paz, J., Cowing-Zitron, C., Cole, B. J., Ivans, L. J., Pedmale, U. V., Jung, H. S., Ecker, J. R., Kay, S. A., Chory, J. (April 2012) Linking photoreceptor excitation to changes in plant architecture. Genes Dev, 26 (8). pp. 785-90. ISSN 0890-9369

Roberts, D., Pedmale, U. V., Morrow, J., Sachdev, S., Lechner, E., Tang, X., Zheng, N., Hannink, M., Genschik, P., Liscum, E. (October 2011) Modulation of phototropic responsiveness in Arabidopsis through ubiquitination of phototropin 1 by the CUL3-Ring E3 ubiquitin ligase CRL3(NPH3). Plant Cell, 23 (10). pp. 3627-40. ISSN 1040-4651

Keller, M. M., Jaillais, Y., Pedmale, U. V., Moreno, J. E., Chory, J., Ballare, C. L. (July 2011) Cryptochrome 1 and phytochrome B control shade-avoidance responses in Arabidopsis via partially independent hormonal cascades. Plant J, 67 (2). pp. 195-207. ISSN 0960-7412

Pedmale, U. V., Celaya, R. B., Liscum, E. (2010) Phototropism: mechanism and outcomes. Arabidopsis Book, 8. e0125. ISSN 1543-8120

Pedmale, U. V., Liscum, E. (July 2007) Regulation of phototropic signaling in Arabidopsis via phosphorylation state changes in the phototropin 1-interacting protein NPH3. J Biol Chem, 282 (27). pp. 19992-20001. ISSN 0021-9258 (Print)0021-9258

Lariguet, P., Schepens, I., Hodgson, D., Pedmale, U. V., Trevisan, M., Kami, C., de Carbonnel, M., Alonso, J. M., Ecker, J. R., Liscum, E., Fankhauser, C. (June 2006) PHYTOCHROME KINASE SUBSTRATE 1 is a phototropin 1 binding protein required for phototropism. Proc Natl Acad Sci U S A, 103 (26). pp. 10134-9. ISSN 0027-8424 (Print)0027-8424

Esmon, C. A., Pedmale, U. V., Liscum, E. (2005) Plant tropisms: providing the power of movement to a sessile organism. Int J Dev Biol, 49 (5-6). pp. 665-74. ISSN 0214-6282 (Print)0214-6282

Book Section

Celaya, R. B., Pedmale, U. V., Liscum, E. (2009) Signaling in Plant Phototropism. In: Signaling in Plants. Springer Berlin Heidelberg, pp. 239-260. ISBN 9783540892281

Thesis

Hu, Yuzhao (August 2023) Role of cryptochromes in chromatin remodeling and DNA damage repair. PhD thesis, Cold Spring Harbor Laboratory.