Items where Subject is "bioinformatics > genomics and proteomics > genetics & nucleic acid processing > DNA, RNA structure, function, modification > snRNA"

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Number of items at this level: 26.

B

Buratti, E., Chivers, M., Královičová, J., Romano, M., Baralle, M., Krainer, Adrian R., Vořechovský, I. (2007) Aberrant 5' splice sites in human disease genes: mutation pattern, nucleotide structure and comparison of computational tools that predict their utilization. Nucleic Acids Res, 35 (13). pp. 4250-4263. ISSN 1362-4962 (Electronic)

C

Chong, S. S., Hu, P., Hernandez, N. (2001) Reconstitution of transcription from the human U6 small nuclear RNA promoter with eight recombinant polypeptides and a partially purified RNA polymerase III complex. Journal of Biological Chemistry, 276 (23). pp. 20727-20734. ISSN 0021-9258

E

Emran, F., Florens, L., Ma, B., Swanson, S. K., Washburn, M. P., Hernandez, N. (2006) A role for Yin Yang-1 (YY1) in the assembly of snRNA transcription complexes. Gene, 377. pp. 96-108. ISSN 0378-1119 (Print)

F

Ford, E., Strubin, M., Hernandez, N. (1998) The Oct-1 POU domain activates snRNA gene transcription by contacting a region in the SNAPc largest subunit that bears sequence similarities to the Oct-1 coactivator OBF-1. Genes and Development, 12 (22). pp. 3528-40. ISSN 08909369 (ISSN)

H

Henry, R. W., Ford, E., Mital, R., Mittal, V., Hernandez, N. (1998) Crossing the line between RNA polymerases: transcription of human snRNA genes by RNA polymerases II and III. Cold Spring Harbor Symposia on Quantitative Biology, 63. pp. 111-20. ISSN 00917451 (ISSN)

Henry, R. W., Ma, B., Sadowski, C. L., Kobayashi, R., Hernandez, N. (1996) Cloning and characterization of SNAP50, a subunit of the snRNA-activating protein complex SNAPc. Embo J, 15 (24). pp. 7129-36. ISSN 0261-4189 (Print)

Hernandez, N. (2001) Small nuclear RNA genes: a model system to study fundamental mechanisms of transcription. Journal of Biological Chemistry, 276 (29). pp. 26733-26736. ISSN 0021-9258

Hernandez, N., Lucito, R. (1988) Elements required for transcription initiation of the human U2 snRNA gene coincide with elements required for snRNA 3' end formation. Embo J, 7 (10). pp. 3125-34.

Hernandez, N., Lucito, R. (1987) Formation of the 3' End of snRNAs. Molecular Biology Reports, 12 (3). p. 145. ISSN 0301-4851

Hernandez, N., Sadowski, C. L., Henry, R. W., Mital, R., Lobo, S. (1994) Rna-Polymerase-Ii and Rna-Polymerase-Iii Transcription of the Human Snrna Genes. Journal of Cellular Biochemistry. p. 5. ISSN 0730-2312

L

Liu, M. H., Reddy, R., Henning, D., Spector, D., Busch, H. (1984) Primary and secondary structure of dinoflagellate U5 small nuclear RNA. Nucleic Acids Research, 12 (3). pp. 1529-42. ISSN 0305-1048 (Print)0305-1048

Lobo, S. M., Ifill, S., Hernandez, N. (1990) cis-acting elements required for RNA polymerase II and III transcription in the human U2 and U6 snRNA promoters. Nucleic Acids Res, 18 (10). pp. 2891-9. ISSN 0305-1048 (Print)0305-1048 (Linking)

Lobo, S. M., Lucito, R., Hernandez, N. (1988) Formation of the 3' End of Small Nuclear Rnas. Journal of Cellular Biochemistry - Supplement.(12 PART D). p. 211.

M

Ma, B., Hernandez, N. (2001) A map of protein-protein contacts within the small nuclear RNA-activating protein complex SNAPc. Journal of Biological Chemistry, 276 (7). pp. 5027-5035. ISSN 0021-9258

P

Potashkin, J., Frendewey, D. (1990) A mutation in a single gene of Schizosaccharomyces pombe affects the expression of several snRNAs and causes defects in RNA processing. EMBO J, 9 (2). pp. 525-34. ISSN 0261-4189 (Print)0261-4189 (Linking)

R

Ratnasabapathy, R., Sheldon, M., Johal, L., Hernandez, N. (1990) The HIV-1 long terminal repeat contains an unusual element that induces the synthesis of short RNAs from various mRNA and snRNA promoters. Genes Dev, 4 (12A). pp. 2061-74. ISSN 0890-9369 (Print)0890-9369 (Linking)

Roca, X., Akerman, M., Gaus, H., Berdeja, A., Bennett, C. F., Krainer, A. R. (2012) Widespread recognition of 5' splice sites by noncanonical base-pairing to U1 snRNA involving bulged nucleotides. Genes & Development, 26 (10). pp. 1098-109. ISSN 1549-5477 (Electronic)0890-9369 (Linking)

Roca, X., Krainer, A. R. (2009) Recognition of atypical 5' splice sites by shifted base-pairing to U1 snRNA. Nat Struct Mol Biol, 16 (2). pp. 176-182.

Roca, X., Krainer, A. R., Eperon, I. C. (2013) Pick one, but be quick: 5′ splice sites and the problems of too many choices. Genes and Development, 27 (2). pp. 129-144. ISSN 08909369 (ISSN)

S

Sadowski, C. L., Henry, R. W., Kobayashi, R., Hernandez, N. (1996) The SNAP45 subunit of the small nuclear RNA (snRNA) activating protein complex is required for RNA polymerase II and III snRNA gene transcription and interacts with the TATA box binding protein. Proceedings of the National Academy of Sciences, 93 (9). pp. 4289-93. ISSN 0027-8424 (Print)

Sadowski, C. L., Henry, R. W., Lobo, S. M., Hernandez, N. (1994) Targeting TBP to a non-TATA box cis-regulatory element: a TBP-containing complex activates transcription from snRNA promoters through the PSE. Genes & Development, 7 (8). pp. 1535-1548. ISSN 0890-9369

Sadowski, C. L., Henry, R. W., Lobo, S. M., Hernandez, N. (1993) Targeting TBP to a non-TATA box cis-regulatory element: a TBP-containing complex activates transcription from snRNA promoters through the PSE. Genes Dev, 7 (8). pp. 1535-48. ISSN 0890-9369 (Print)

Schramm, L., Pendergrast, P. S., Sun, Y. L., Hernandez, N. (2000) Different human TFIIIB activities direct RNA polymerase III transcription from TATA-containing and TATA-less promoters. Genes & Development, 14 (20). pp. 2650-2663. ISSN 0890-9369

Sheldon, M., Ratnasabapathy, R., Johal, L., Hernandez, N. (1991) The Hiv-1 Ltr Contains an Unusual Element That Induces the Synthesis of Short Transcripts from Various Messenger Rna and Small Nuclear Rna Promoters. Journal of Cellular Biochemistry, 47 (Suppl ). p. 263.

T

Tanaka, M., Lai, J. S., Herr, W. (1992) Promoter-selective activation domains in Oct-1 and Oct-2 direct differential activation of an snRNA and mRNA promoter. Cell, 68 (4). pp. 755-67. ISSN 0092-8674 (Print)0092-8674 (Linking)

Y

Yuan, C. C., Zhao, X., Florens, L., Swanson, S. K., Washburn, M. P., Hernandez, N. (2007) CHD8 associates with human Staf and contributes to efficient U6 RNA polymerase III transcription. Mol Cell Biol, 27 (24). pp. 8729-8738. ISSN 0270-7306 (Print)

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