Items where Subject is "phylogenetic tree annotation"

H

Hladish, T., Gopalan, V., Liang, C., Qiu, W., Yang, P., Stoltzfus, A. (June 2007) Bio :: NEXUS: a Perl API for the NEXUS format for comparative biological data. Bmc Bioinformatics, 8. p. 191. ISSN 1471-2105

Howarth, Dianella G, Dunn, Matthew P (2016) Phylogenetic Approach to Studying Developmental Evolution: A Model Clade Approach. In: Encyclopedia of Evolutionary Biology. Academic Press, Waltham, Massachusetts, USA, pp. 246-253.

I

Ilic, K., Kellogg, E. A., Jaiswal, P., Zapata, F., Stevens, P. F., Vincent, L. P., Avraham, S., Reiser, L., Pujar, A., Sachs, M. M., Whitman, N. T., McCouch, S. R., Schaeffer, M. L., Ware, D. H., Stein, L. D., Rhee, S. Y. (February 2007) The plant structure ontology, a unified vocabulary of anatomy and morphology of a flowering plant. Plant Physiology, 143 (2). pp. 587-599. ISSN 0032-0889

J

Jojic, V., Jojic, N., Meek, C., Geiger, D., Siepel, A., Haussler, D., Heckerman, D. (August 2004) Efficient approximations for learning phylogenetic HMM models from data. Bioinformatics, 20 Sup. i161-8. ISSN 1367-4803

M

Ma, Y., Mathews, M. B. (August 1996) Structure, function, and evolution of adenovirus-associated RNA: a phylogenetic approach. Journal of Virology, 70 (8). pp. 5083-99. ISSN 0022-538X

P

Pan, X. K., Stein, L. D., Brendel, V. (September 2005) SynBrowse: a synteny browser for comparative sequence analysis. Bioinformatics, 21 (17). pp. 3461-3468. ISSN 1367-4803

Pang, A., Smith, A. D., Nuin, P. A. S., Tillier, E. R. (September 2005) SIMPROT: Using an empirically determined indel distribution in simulations of protein evolution. BMC Bioinformatics, 6. ISSN 1471-2105

S

Siepel, A., Haussler, D. (2003) Combining phylogenetic and hidden Markov models in biosequence analysis. Proceedings of the seventh annual international conference on Research in computational molecular biology. pp. 277-286.

W

White, J. R., Navlakha, S., Nagarajan, N., Ghodsi, M. R., Kingsford, C., Pop, M. (March 2010) Alignment and clustering of phylogenetic markers--implications for microbial diversity studies. BMC Bioinformatics, 11 (3). p. 152. ISSN 1471-2105