Browse by CSHL Author

Williams, Jason, Nash, Bruce, Ghiban, Cornel, Khalfan, Mohammed, Hilgert, Uwe, Lauter, Susan, Yang, Chun-Hua, Micklos, David Andrew (April 2024) Analysis of DNA Barcodes Using DNA Subway. Methods in molecular biology (Clifton, N.J.), 2744. pp. 551-560. ISSN 1064-3745

Pepenella, Sharon, Hackett, Jennifer, Fernandez-Marco, Cristina, Petracca, Jeffry, Marizzi, Christine, Nash, Bruce, Micklos, David A (April 2024) A Rapid, Equipment-Free DNA Isolation Method for DNA Barcoding. Methods in molecular biology (Clifton, N.J.), 2744. pp. 517-523. ISSN 1064-3745

Hackett, Jennifer, Pepenella, Sharon, Marco, Cristina Fernandez, Bodt, Louise, Grajales, Lina Ruiz, Petracca, Jeffry, Burke, Justin, Mayle, Allison, Nash, Bruce, Micklos, David A (April 2024) Simple, Robust Invertebrate DNA Barcoding: Chelex-Based DNA Extraction and Optimized COI Amplification. Methods in molecular biology (Clifton, N.J.), 2744. pp. 119-127. ISSN 1064-3745

Swetnam, Tyson L, Antin, Parker B, Bartelme, Ryan, Bucksch, Alexander, Camhy, David, Chism, Greg, Choi, Illyoung, Cooksey, Amanda M, Cosi, Michele, Cowen, Cindy, Culshaw-Maurer, Michael, Davey, Robert, Davey, Sean, Devisetty, Upendra, Edgin, Tony, Edmonds, Andy, Fedorov, Dmitry, Frady, Jeremy, Fonner, John, Gillan, Jeffrey K, Hossain, Iqbal, Joyce, Blake, Lang, Konrad, Lee, Tina, Littin, Shelley, McEwen, Ian, Merchant, Nirav, Micklos, David, Nelson, Andrew, Ramsey, Ashley, Roberts, Sarah, Sarando, Paul, Skidmore, Edwin, Song, Jawon, Sprinkle, Mary Margaret, Srinivasan, Sriram, Stanzione, Dan, Strootman, Jonathan D, Stryeck, Sarah, Tuteja, Reetu, Vaughn, Matthew, Wali, Mojib, Wall, Mariah, Walls, Ramona, Wang, Liya, Wickizer, Todd, Williams, Jason, Wregglesworth, John, Lyons, Eric (February 2024) CyVerse: Cyberinfrastructure for open science. PLoS Computational Biology, 20 (2). e1011270. ISSN 1553-734X

Swetnam, Tyson L, Antin, Parker B, Bartelme, Ryan, Bucksch, Alexander, Camhy, David, Chism, Greg, Choi, Illyoung, Cooksey, Amanda M, Cosi, Michele, Cowen, Cindy, Culshaw-Maurer, Michael, Davey, Robert, Davey, Sean, Devisetty, Upendra, Edgin, Tony, Edmonds, Andy, Fedorov, Dmitry, Frady, Jeremy, Fonner, John, Gillan, Jeffrey K, Hossain, Iqbal, Joyce, Blake, Lang, Konrad, Lee, Tina, Littin, Shelley, Mcewen, Ian, Merchant, Nirav, Micklos, David, Nelson, Andrew, Ramsey, Ashley, Roberts, Sarah, Sarando, Paul, Skidmore, Edwin, Song, Jawon, Sprinkle, Mary Margaret, Srinivasan, Sriram, Strootman, Jonathan D, Stryeck, Sarah, Tuteja, Reetu, Vaughn, Matthew, Wali, Mojib, Wall, Mariah, Walls, Ramona, Wang, Liya, Wickizer, Todd, Williams, Jason, Wregglesworth, John, Lyons, Eric (June 2023) CyVerse: Cyberinfrastructure for Open Science. (Submitted)

Smith, T., Bock, H., Hewlett, J., Lazare, J., Madabushi, A., Mann, C., Micklos, D., Nash, B., Porter, S., Rao, P., Read, R., Tubon, T., Wolslegel, K., Fletcher, L. (August 2020) Introducing the NSF-ATE InnovATEBIO National Biotechnology Education Center. J Biomol Tech, 31 (Suppl). S29-S30. ISSN 1524-0215 (Print)1524-0215

Wang, L., Lu, Z., Delabastide, M., Van Buren, P., Wang, X., Ghiban, C., Regulski, M., Drenkow, J., Xu, X., Ortiz-Ramirez, C., Marco, C.F., Goodwin, S., Dobin, A., Birnbaum, K. D., Jackson, D. P., Martienssen, R. A., McCombie, W. R., Micklos, D. A., Schatz, M. C., Ware, D. H., Gingeras, T. R. (March 2020) Management, Analyses, and Distribution of the MaizeCODE Data on the Cloud. Frontiers in Plant Science, 11 (289). ISSN 1664-462X (Public Dataset)

Wang, Liya, Lu, Zhenyuan, delaBastide, Melissa, Van Buren, Peter, Wang, Xiaofei, Ghiban, Cornel, Regulski, Michael, Drenkow, Jorg, Xu, Xiaosa, Ortiz-Ramirez, Carlos, Fernandez-Marco, Cristina, Goodwin, Sara, Dobin, Alexander, Birnbaum, Kenneth, Jackson, David, Martienssen, Robert, McCombie, William, Micklos, David, Schatz, Michael, Ware, Doreen, Gingeras, Thomas (November 2019) Management, Analyses, and Distribution of the MaizeCODE Data on the Cloud. BioRxiv. (Unpublished)

Tello-Ruiz, M. K., Marco, C. F., Hsu, F. M., Khangura, R. S., Qiao, P., Sapkota, S., Stitzer, M. C., Wasikowski, R., Wu, H., Zhan, J., Chougule, K., Barone, L. C., Ghiban, C., Muna, D., Olson, A. C., Wang, L., Ware, D., Micklos, D. A. (October 2019) Double triage to identify poorly annotated genes in maize: The missing link in community curation. PLoS ONE, 14 (10). Article number e0224086. ISSN 19326203 (ISSN)

Marizzi, Christine, Florio, Antonia, Lee, Melissa, Khalfan, Mohammed, Ghiban, Cornel, Nash, Bruce, Dorey, Jenna, McKenzie, Sean, Mazza, Christine, Cellini, Fabiana, Baria, Carlo, Bepat, Ron, Cosentino, Lena, Dvorak, Alexander, Gacevic, Amina, Guzman-Moumtzis, Cristina, Heller, Francesca, Holt, Nicholas Alexander, Horenstein, Jeffrey, Joralemon, Vincent, Kaur, Manveer, Kaur, Tanveer, Khan, Armani, Kuppan, Jessica, Laverty, Scott, Lock, Camila, Pena, Marianne, Petrychyn, Ilona, Puthenkalam, Indu, Ram, Daval, Ramos, Arlene, Scoca, Noelle, Sin, Rachel, Gonzalez, Izabel, Thakur, Akansha, Usmanov, Husan, Han, Karen, Wu, Andy, Zhu, Tiger, Micklos, David Andrew (July 2018) DNA barcoding Brooklyn (New York): A first assessment of biodiversity in Marine Park by citizen scientists. PLoS One, 13 (7). e0199015. ISSN 1932-6203 (Public Dataset)

Barone, L., Williams, J., Micklos, D. (October 2017) Unmet needs for analyzing biological big data: A survey of 704 NSF principal investigators. PLoS Comput Biol, 13 (10). e1005755. ISSN 1553-734x

Barone, Lindsay, Williams, Jason, Micklos, David (February 2017) Unmet Needs for Analyzing Biological Big Data: A Survey of 704 NSF Principal Investigators. BioRxiv. (Unpublished)

Merchant, N., Lyons, E., Goff, S., Vaughn, M., Ware, D., Micklos, D., Antin, P. (January 2016) The iPlant Collaborative: Cyberinfrastructure for Enabling Data to Discovery for the Life Sciences. PLoS Biol, 14 (1). e1002342. ISSN 1545-7885 (Electronic)1544-9173 (Linking)

Hilgert, U., McKay, S., Ghiban, C., Khalfan, M., Micklos, D., Williams, J. (July 2014) DNA Subway: Making genome analysis egalitarian. ACM International Conference Proceeding Series . Association for Computing Machinery, Article number 70. ISBN 978-145032893-7

Micklos, D., Lauter, S., Nisselle, A. (2011) Essays on science and society. Lessons from a science education portal. Science, 334 (6063). pp. 1657-1658. ISSN 00368075 (ISSN)

Goff, S. A, Vaughn, M., McKay, S., Lyons, E., Stapleton, A. E, Gessler, D. , Matasci, N., Wang, L., Hanlon, M., Lenards, A., Muir, A., Merchant, N., Lowry, S., Mock, S., Helmke, M., Kubach, A., Narro, M., Hopkins, N., Micklos, D., Hilgert, U., Gonzales, M, Jordan, C., Skidmore, E., Dooley, R., Cazes, J., McLay, R., Lu, Z., Pasternak, S., Koesterke, L., Piel, W. H., Grene, R., Noutsos, C., Gendler, K., Feng, X., Tang, C., Lent, M., Kim, S. J., Kvilekval, K., Manjunath, B.S., Tannen, V., Stamatakis, A., Sanderson, M. J., Welch, S. M., Cranston, K. , Soltis, P. , Soltis, D., O'Meara, B., Ane, C., Brutnell, T., Kleibenstein, D. J., White, J. W., Leebens-Mack, J., Donoghue, M. J., Spalding, E. P., Vision, T. J., Myers, C. R., Lowenthal, D., Enquist, B. J., Boyle, B., Akoglu, A., Andrews, G., Ram, S., Ware, D., Stein, L., Stanzione, D. (2011) The iPlant Collaborative: Cyberinfrastructure for Plant Biology. Frontiers in Plant Science, 2. ISSN 1664-462X

Hacisalihoglu, G., Hilgert, U., Nash, E. B., Micklos, D. A. (2008) An innovative plant genomics and gene annotation program for high school, community college, and university faculty. CBE Life Sci Educ, 7 (3). pp. 310-6.

Micklos, D. (August 2007) Coming into the gene age: The challenge to biology educators. Chromosome Research, 15 (S2). p. 70. ISSN 0967-3849

Micklos, D. A. (October 2004) Creating connections: Museums and the public understanding of research. Nature, 431 (7010). p. 743. ISSN 0028-0836

Micklos, D., Carlson, E. (November 2000) Engineering American society: the lesson of eugenics. Nature Reviews Genetics, 1 (2). pp. 153-158. ISSN 1471-0056

Micklos, D. A., Freyer, G. A. (1990) DNA science : a first course in recombinant DNA technology. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY. ISBN 0892784113