Faith, J. J., Olson, A. J., Gardner, T. S., Sachidanandam, R. (September 2007) Lightweight genome viewer: portable software for browsing genomics data in its chromosomal context. BMC Bioinformatics, 8. p. 344. ISSN 1471-2105
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Abstract
Lightweight genome viewer (lwgv) is a web-based tool for visualization of sequence annotations in their chromosomal context. It performs most of the functions of larger genome browsers, while relying on standard flat-file formats and bypassing the database needs of most visualization tools. Visualization as an aide to discovery requires display of novel data in conjunction with static annotations in their chromosomal context. With database-based systems, displaying dynamic results requires temporary tables that need to be tracked for removal.
| Item Type: | Paper |
|---|---|
| Subjects: | bioinformatics > genomics and proteomics > annotation > sequence annotation bioinformatics > genomics and proteomics > genetics & nucleic acid processing > DNA, RNA structure, function, modification > chromosome bioinformatics > genomics and proteomics > genetics & nucleic acid processing > DNA, RNA structure, function, modification > chromosomes, structure and function > chromosome bioinformatics > genomics and proteomics > computers > computer software |
| CSHL Authors: | |
| Communities: | CSHL labs > Sachidanandam lab |
| Depositing User: | CSHL Librarian |
| Date: | September 2007 |
| Date Deposited: | 15 Nov 2011 17:23 |
| Last Modified: | 08 Apr 2013 14:25 |
| PMCID: | PMC2238324 |
| Related URLs: | |
| URI: | https://repository.cshl.edu/id/eprint/23013 |
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