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Zariwala, H. A., Kepecs, A., Uchida, N., Hirokawa, J., Mainen, Z. F. (2013) The Limits of Deliberation in a Perceptual Decision Task. Neuron, 78 (2). pp. 339-51. ISSN 08966273 (ISSN)

Felsen, G., Mainen, Z. F. (July 2012) Midbrain contributions to sensorimotor decision making. Journal of Neurophysiology, 108 (1). pp. 135-147. ISSN 0022-3077

Miura, K., Mainen, Z. F., Uchida, N. (June 2012) Odor Representations in Olfactory Cortex: Distributed Rate Coding and Decorrelated Population Activity. Neuron, 74 (6). pp. 1087-1098. ISSN 0896-6273

Kepecs, A., Mainen, Z. F. (May 2012) A computational framework for the study of confidence in humans and animals. Philos Trans R Soc Lond B Biol Sci, 367 (1594). pp. 1322-37. ISSN 1471-2970 (Electronic)0962-8436 (Linking)

Quirk, M. C., Sosulski, D. L., Feierstein, C. E., Uchida, N., Mainen, Z. F. (November 2009) A defined network of fast-spiking interneurons in orbitofrontal cortex: responses to behavioral contingencies and ketamine administration. Frontiers in Systems Neuroscience, 3. p. 13. ISSN ISSN 1662-5137

Ranade, S. P., Mainen, Z. F. (August 2009) Transient firing of dorsal raphe neurons encodes diverse and specific sensory, motor and reward events. Journal of Neurophysiology, 102 (5). pp. 3026-3037. ISSN 00223077 (ISSN)

Mainen, Z. F., Kepecs, A. (February 2009) Neural representation of behavioral outcomes in the orbitofrontal cortex. Current Opinion in Neurobiology, 19 (1). pp. 84-91.

Felsen, G., Mainen, Z. F. (October 2008) Neural substrates of sensory-guided locomotor decisions in the rat superior colliculus. Neuron, 60 (1). pp. 137-48.

Kepecs, A., Uchida, N., Zariwala, H. A., Mainen, Z. F. (September 2008) Neural correlates, computation and behavioural impact of decision confidence. Nature, 455 (7210). pp. 227-31.

Huber, D., Petreanu, L., Ghitani, N., Ranade, S., Hromadka, T., Mainen, Z., Svoboda, K. (January 2008) Sparse optical microstimulation in barrel cortex drives learned behaviour in freely moving mice. Nature, 451 (7174). pp. 61-4.

Kim, Donghwi, Stanacevic, M. , Kamoua, R. , Mainen, Z. F. (2008) A low-power low-data-rate neural recording system with adaptive spike detection. 51st IEEE International Midwest Symposium on Circuits and Systems . pp. 822-825.

Mainen, Z. F. (December 2007) The main olfactory bulb and innate behavior: different perspectives on an olfactory scene. Nat Neurosci, 10 (12). pp. 1511-2.

Sato, T. R., Gray, N. W., Mainen, Z. F., Svoboda, K. (July 2007) The Functional Microarchitecture of the Mouse Barrel Cortex. PLoS Biology, 5 (7). e189.

Kepecs, A., Uchida, N., Mainen, Z. F. (July 2007) Rapid and Precise Control of Sniffing during Olfactory Discrimination in Rats. J Neurophysiol, 98 (1). pp. 205-213. ISSN 0022-3077 (Print)

Xiao, Yun, Donghwi, Kim, Stanacevic, M., Mainen, Z. F. (2007) Low-Power High-Resolution 32-channel Neural Recording System. Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 1. pp. 2373-2376.

Uchida, N., Mainen, Z. F. (2007) Odor concentration invariance by chemical ratio coding. Front Syst Neurosci, 1. p. 3.

Gurden, H., Uchida, N., Mainen, Z. F. (October 2006) Sensory-evoked intrinsic optical signals in the olfactory bulb are coupled to glutamate release and uptake. Neuron, 52 (2). pp. 335-45. ISSN 0896-6273 (Print)

Feierstein, C. E. , Quirk, M. C., Uchida, N., Sosulski, D. L., Mainen, Z. F. (August 2006) Representation of spatial goals in rat orbitofrontal cortex. Neuron, 51 (4). pp. 495-507. ISSN 0896-6273 (Print)

Mainen, Z. F. (August 2006) Behavioral analysis of olfactory coding and computation in rodents. Curr Opin Neurobiol, 16 (4). pp. 429-34. ISSN 0959-4388 (Print)

Wilson, R. I., Mainen, Z. F. (July 2006) Early events in olfactory processing. Annu Rev Neurosci, 29. pp. 163-201. ISSN 0147-006X (Print)

Uchida, N., Kepecs, A., Mainen, Z. F. (June 2006) Seeing at a glance, smelling in a whiff: rapid forms of perceptual decision making. Nature Reviews Neuroscience, 7 (6). pp. 485-91. ISSN 1471-0048

Kepecs, A., Uchida, N., Mainen, Z . F. (February 2006) The sniff as a unit of olfactory processing. Chem Senses, 31 (2). pp. 167-79. ISSN 0379-864X (Print)

Egger, V., Svoboda, K., Mainen, Z. F. (April 2005) Dendrodendritic synaptic signals in olfactory bulb granule cells: local spine boost and global low-threshold spike. J Neurosci, 25 (14). pp. 3521-30. ISSN 1529-2401 (Electronic)

Uchida, N., Mainen, Z. F. (November 2003) Speed and accuracy of olfactory discrimination in the rat. Nature Neuroscience, 6 (11). pp. 1224-9. ISSN 1097-6256

Egger, V., Svoboda, K., Mainen, Z. F. (August 2003) Mechanisms of lateral inhibition in the olfactory bulb: Efficiency and modulation of spike-evoked calcium influx into granule cells. Journal of Neuroscience, 23 (20). pp. 7551-7558. ISSN 0270-6474

Malinow, R., Mainen, Z. F., Hayashi, Y. (June 2000) LTP mechanisms: from silence to four-lane traffic. Current Opinion in Neurobiology, 10 (3). pp. 352-357. ISSN 0959-4388

Maravall, M., Mainen, Z. F., Sabatini, B. L., Svoboda, K. (May 2000) Estimating intracellular calcium concentrations and buffering without wavelength ratioing. Biophysical Journal, 78 (5). pp. 2655-2667. ISSN 0006-3495

Mainen, Z. F., Maletic-Savatic, M., Shi, S. H., Hayashi, Y., Malinow, R., Svoboda, K. (June 1999) Two-photon imaging in living brain slices. Methods, 18 (2). pp. 231-39. ISSN 1046-2023 (Print)

Mainen, Z. F., Malinow, R., Svoboda, K. (May 1999) Synaptic calcium transients in single spines indicate that NMDA receptors are not saturated. Nature, 399 (6732). pp. 151-5. ISSN 0028-0836 (Print)

Svoboda, K., Mainen, Z. F. (March 1999) Synaptic [Ca2+]: intracellular stores spill their guts. Neuron, 22 (3). pp. 427-30. ISSN 0896-6273 (Print)

Mainen, Z. F., Jia, Z., Roder, J., Malinow, R. (November 1998) Use-dependent AMPA receptor block in mice lacking GluR2 suggests postsynaptic site for LTP expression. Nature Neuroscience, 1 (7). pp. 579-86. ISSN 1097-6256

Malinow, R., Mainen, Z. F. (March 1996) Long-term potentiation in the CA1 hippocampus. Science, 271 (5255). pp. 1604-6.