A genome-wide association study platform built on iPlant cyber-infrastructure

Wang, L., Ware, D., Lushbough, C., Merchant, N., Stein, L. (2015) A genome-wide association study platform built on iPlant cyber-infrastructure. Concurrency Computation, 27 (2). pp. 420-432. ISSN 15320626

URL: http://onlinelibrary.wiley.com/doi/10.1002/cpe.323...
DOI: 10.1002/cpe.3236

Abstract

We demonstrate a flexible genome-wide association study platform built upon the iPlant Collaborative Cyber-infrastructure. The platform supports big data management, sharing, and large-scale study of both genotype and phenotype data on clusters. End users can add their own analysis tools and create customized analysis workflows through the graphical user interfaces in both iPlant Discovery Environment and BioExtract server.

Item Type: Paper
Subjects: bioinformatics
bioinformatics > genomics and proteomics > genetics & nucleic acid processing > genomes
CSHL Authors:
Communities: CSHL labs > Ware lab
Depositing User: Matt Covey
Date Deposited: 27 Feb 2015 17:16
Last Modified: 27 Feb 2015 17:16
URI: http://repository.cshl.edu/id/eprint/31237

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