Akman, H. B., Selcuklu, S. D., Donoghue, M. T., Akhavantabasi, S., Sapmaz, A., Spillane, C., Yakicier, M. C., Erson-Bensan, A. E. (May 2015) ALCAM is indirectly modulated by miR-125b in MCF7 cells. Tumour Biol, 36 (5). pp. 3511-20. ISSN 1423-0380 (Electronic)1010-4283 (Linking)
Andl, T., Murchison, E. P., Liu, Fei, Zhang, Yi, Yunta-Gonzalez, M., Tobias, J. W., Andl, C. D., Seykora, J. T., Hannon, G. J., Millar, S. E. (May 2006) The miRNA-Processing Enzyme Dicer Is Essential for the Morphogenesis and Maintenance of Hair Follicles. Current Biology, 16 (10). pp. 1041-1049. ISSN 09609822
Bandyopadhyay, S., Mitra, R., Maulik, U., Zhang, M. Q. (2010) Development of the human cancer microRNA network. Silence, 1 (1). p. 6. ISSN 1758-907x
Ben-Ari, Y., Brody, Y., Kinor, N., Mor, A., Tsukamoto, T., Spector, D. L., Singer, R. H., Shav-Tal, Y. (May 2010) The life of an mRNA in space and time. Journal of Cell Science, 123 (10). pp. 1761-1774. ISSN 0021-9533
Benetti, R., Gonzalo, S., Jaco, I., Munoz, P., Gonzalez, S., Schoeftner, S., Murchison, E. P., Andl, T., Chen, T. P., Klatt, P., Li, E., Serrano, M., Millar, S., Hannon, G. J., Blasco, M. A. (March 2008) A mammalian microRNA cluster controls DNA methylation and telomere recombination via Rbl2-dependent regulation of DNA methyltransferases. Nature Structural & Molecular Biology, 15 (3). pp. 268-279. ISSN 1545-998515459993 (ISSN)
Berezikov, E., Robine, N., Samsonova, A., Westholm, J. O., Naqvi, A., Hung, J. H., Okamura, K., Dai, Q., Bortolamiol-Becet, D., Martin, R., Zhao, Y. J., Zamore, P. D., Hannon, G. J., Marra, M. A., Weng, Z. P., Perrimon, N., Lai, E. C. (February 2011) Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence. Genome Research, 21 (2). pp. 203-215. ISSN 1088-9051
Bibel, Brianna, Elkayam, Elad, Silletti, Steve, Komives, Elizabeth, Joshua-Tor, Leemor (January 2022) Target binding triggers hierarchical phosphorylation of human Argonaute-2 to promote target release. Elife, 11 (e76908). ISSN 2050-084x
Boccara, M., Sarazin, A., Billoud, B., Jolly, V., Martienssen, R., Baulcombe, D., Colot, V. (October 2007) New approaches for the analysis of Arabidopsis thaliana small RNAs. Biochimie, 89 (10). pp. 1252-6. ISSN 0300-9084 (Print)
Borges, F., Parent, J. S., van Ex, F., Wolff, P., Martinez, G., Kohler, C., Martienssen, R. A. (February 2018) Transposon-derived small RNAs triggered by miR845 mediate genome dosage response in Arabidopsis. Nat Genet, 50 (2). pp. 186-192. ISSN 1061-4036
Borges, F., Pereira, P. A., Slotkin, R. K., Martienssen, R. A., Becker, J. D. (March 2011) MicroRNA activity in the Arabidopsis male germline. Journal of Experimental Botany, 62 (5). pp. 1611-1620. ISSN 0022-0957
Brady, S. M., Zhang, L., Megraw, M., Martinez, N. J., Jiang, E., Yi, C. S., Liu, W., Zeng, A., Taylor-Teeples, M., Kim, D., Ahnert, S., Ohler, U., Ware, D. H., Walhout, A. J. M., Benfey, P. N. (January 2011) A stele-enriched gene regulatory network in the Arabidopsis root. Molecular Systems Biology, 7. p. 459.
Burke, S. L., Hammell, M., Ambros, V. (August 2015) Robust Distal Tip Cell Pathfinding in the Face of Temperature Stress Is Ensured by Two Conserved microRNAS in Caenorhabditis elegans. Genetics, 200 (4). pp. 1201-18. ISSN 1943-2631 (Electronic)0016-6731 (Linking)
Cabal, R., Khanin, R., Viali, A., Socci, N., Lucito, R., Olshen, A., Zhang, J., Gerald, W., Powers, S., Ladanyi, M. (February 2011) Testing and Validating High Throughput Genomic Analysis of FFPE Samples: Systematic Gene Expression Differences between Matched Frozen and FFPE Samples Due to Rapid mRNA Degradation Signals. Modern Pathology, 24. p. 1875. ISSN 0893-3952
Cable, Jennifer, Heard, Edith, Hirose, Tetsuro, Prasanth, Kannanganattu V, Chen, Ling-Ling, Henninger, Jonathan E, Quinodoz, Sofia A, Spector, David L, Diermeier, Sarah D, Porman, Allison M, Kumar, Dhiraj, Feinberg, Mark W, Shen, Xiaohua, Unfried, Juan Pablo, Johnson, Rory, Chen, Chun-Kan, Wilusz, Jeremy E, Lempradl, Adelheid, McGeary, Sean E, Wahba, Lamia, Pyle, Anna Marie, Hargrove, Amanda E, Simon, Matthew D, Marcia, Marco, Przanowska, Róża K, Chang, Howard Y, Jaffrey, Samie R, Contreras, Lydia M, Chen, Qi, Shi, Junchao, Mendell, Joshua T, He, Lin, Song, Erwei, Rinn, John L, Lalwani, Mukesh Kumar, Kalem, Murat Can, Chuong, Edward B, Maquat, Lynne E, Liu, Xuhang (November 2021) Noncoding RNAs: biology and applications-a Keystone Symposia report. Annals of the New York Academy of Sciences. ISSN 0077-8923
Canto-Pastor, A., Molla-Morales, A., Ernst, E., Dahl, W., Zhai, J., Yan, Y., Meyers, B. C., Shanklin, J., Martienssen, R. (January 2015) Efficient transformation and artificial miRNA gene silencing in Lemna minor. Plant Biol (Stuttg), 17 (s1). pp. 59-65. ISSN 1435-8603
Carlston, Colleen, Weinmann, Robin, Stec, Natalia, Abbatemarco, Simona, Schwager, Francoise, Wang, Jing, Ouyang, Huiwu, Ewald, Collin Y, Gotta, Monica, Hammell, Christopher M (November 2021) PQN-59 antagonizes microRNA-mediated repression during post-embryonic temporal patterning and modulates translation and stress granule formation in C. elegans. PLoS Genetics, 17 (11). e1009599. ISSN 1553-7390
Castellano, L., Giamas, G., Jacob, J., Coombes, R. C., Lucchesi, W., Thiruchelvam, P., Barton, G., Jiao, L. R., Wait, R., Waxman, J., Hannon, G. J., Stebbing, J. (2009) The estrogen receptor-α-induced microRNA signature regulates itself and its transcriptional response. Proceedings of the National Academy of Sciences of the United States of America, 106 (37). pp. 15732-15737. ISSN 00278424 (ISSN)
Chang, K., Elledge, S. J., Hannon, G. J. (September 2006) Lessons from Nature: microRNA-based shRNA libraries. Nat Methods, 3 (9). pp. 707-14. ISSN 1548-7091 (Print)
Cheloufi, S., Dos Santos, C. O., Chong, M. M. W., Hannon, G. J. (June 2010) A Dicer-independent miRNA biogenesis pathway that requires Ago catalysis. Nature, 465 (7298). 584-U76. ISSN 0028-0836
Chi, S. W., Hannon, G. J., Darnell, R. B. (2012) An alternative mode of microRNA target recognition. Nature Structural and Molecular Biology, 19 (3). pp. 321-327. ISSN 15459993 (ISSN)
Chitwood, D. H., Nogueira, F. T. S., Howell, M. D., Montgomery, T. A., Carrington, J. C., Timmermans, M. C. P. (March 2009) Pattern formation via small RNA mobility. Genes Dev, 23 (5). pp. 549-554. ISSN 0890-9369
Chitwood, D. H., Timmermans, M. C. P. (August 2007) Target mimics modulate miRNAs. Nat Genet, 39 (8). pp. 935-6. ISSN 1061-4036 (Print)
Choi, Y., Nagy, A., Tam, O. H., Hannon, G. J., Millar, S. E. (April 2010) The miRNA-processing enzyme Drosha is required for hair follicle regression, hair shaft differentiation, long-term maintenance of hair follicle stem cells, and epidermal homeostasis. Journal of Investigative Dermatology, 130 (S1). S108. ISSN 0022-202X
Choi, Y. J., Lin, C. P., Ho, J. J., He, X., Okada, N., Bu, P., Zhong, Y., Kim, S. Y., Bennett, M. J., Chen, C., Ozturk, A., Hicks, G. G., Hannon, G. J., He, L. (2011) MiR-34 miRNAs provide a barrier for somatic cell reprogramming. Nature Cell Biology, 13 (11). pp. 1353-1360. ISSN 14657392 (ISSN)
Chong, M. M. W., Zhang, G. A., Cheloufi, S., Neubert, T. A., Hannon, G. J., Littman, D. R. (September 2010) Canonical and alternate functions of the microRNA biogenesis machinery. Genes & Development, 24 (17). pp. 1951-1960. ISSN 0890-9369
Christodoulou, F., Raible, F., Tomer, R., Simakov, O., Trachana, K., Klaus, S., Snyman, H., Hannon, G. J., Bork, P., Arendt, D. (February 2010) Ancient animal microRNAs and the evolution of tissue identity. Nature, 463 (7284). pp. 1084-1088. ISSN 0028-0836
Cifuentes, D., Xue, H. L., Taylor, D. W., Patnode, H., Mishima, Y., Cheloufi, S., Ma, E. B., Mane, S., Hannon, G. J., Lawson, N. D., Wolfe, S. A., Giraldez, A. J. (June 2010) A Novel miRNA Processing Pathway Independent of Dicer Requires Argonaute2 Catalytic Activity. Science, 328 (5986). pp. 1694-1698. ISSN 0036-8075
Clower, C. V., Chatterjee, D., Wang, Z. X., Cantley, L. C., Heiden, M. G. V., Krainer, A. R. (February 2010) The alternative splicing repressors hnRNP A1/A2 and PTB influence pyruvate kinase isoform expression and cell metabolism. Proceedings of the National Academy of Sciences of the United States of America, 107 (5). pp. 1894-1899. ISSN 0027-8424
Creasey, K. M., Zhai, J., Borges, F., Van Ex, F., Regulski, M., Meyers, B. C., Martienssen, R. A. (March 2014) miRNAs trigger widespread epigenetically activated siRNAs from transposons in Arabidopsis. Nature, 508 (7496). pp. 411-415. ISSN 0028-0836
Czech, B., Hannon, G. J. (January 2011) Small RNA sorting: matchmaking for Argonautes. Nat Rev Genet, 12 (1). pp. 19-31. ISSN 1471-0064 (Electronic) 1471-0056 (Linking)
De Pietri Tonelli, D., Pulvers, J. N., Haffner, C., Murchison, E. P., Hannon, G. J., Huttner, W. B. (2008) miRNAs are essential for survival and differentiation of newborn neurons but not for expansion of neural progenitors during early neurogenesis in the mouse embryonic neocortex. Development, 135 (23). pp. 3911-3921. ISSN 09501991 (ISSN)
Deng, L., Shang, L., Bai, S., Chen, J., He, X., Trevino, R. M., Chen, S., Li, X., Meng, X., Yu, B., Wang, X., Liu, Y., McDermott, S. P., Ariazi, A. E., Ginestier, C., Ibarra, I., Ke, J., Luther, T. K., Clouthier, S. G., Xu, L., Shan, G., Song, E., Yao, H., Hannon, G. J., Weiss, S. J., Wicha, M. S., Liu, S. (September 2014) microRNA100 inhibits self-renewal of breast cancer stem-like cells and breast tumor development. Cancer Res, 74 (22). pp. 6648-6660. ISSN 0008-5472
Denli, A. M., Tops, B. B., Plasterk, R. H., Ketting, R. F., Hannon, G. J. (November 2004) Processing of primary microRNAs by the Microprocessor complex. Nature, 432 (7014). pp. 231-5. ISSN 1476-4687 (Electronic)
Dickins, R. A., McJunkin, K., Hernando, E., Premsrirut, P. K., Krizhanovsky, V., Burgess, D. J., Kim, S. Y., Cordon-Cardo, C., Zender, L., Hannon, G. J., Lowe, S. W. (July 2007) Tissue-specific and reversible RNA interference in transgenic mice. Nat Genet, 39 (7). 914 - 921. ISSN 1061-4036 (Print)
Ding, D., Zhang, L., Wang, H., Liu, Z., Zhang, Z., Zheng, Y. (January 2009) Differential expression of miRNAs in response to salt stress in maize roots. Ann Bot, 103 (1). pp. 29-38.
Eggan, S. M., Stoyak, S. R., Volk, D. W., Lazarus, M. S., Huang, Z. J., Lewis, D. A. (May 2010) Assessing Mechanisms of Reduced Cannabinoid 1 Receptor (CB1R) Expression in Schizophrenia: Contribution of Reduced GAD67 mRNA Expression. Biological Psychiatry, 67 (9). p. 225. ISSN 0006-3223
Elkayam, E., Kuhn, C. D., Tocilj, A., Haase, A. D., Greene, E. M., Hannon, G. J., Joshua-Tor, L. (2012) The structure of human argonaute-2 in complex with miR-20a. Cell, 150 (1). pp. 100-110. ISSN 00928674 (ISSN) (Public Dataset)
Elkayam, Elad, Faehnle, Christopher R., Morales, Marjorie, Sun, Jingchuan, Li, Huilin, Joshua-Tor, Leemor (August 2017) Multivalent Recruitment of Human Argonaute by GW182. Molecular Cell, 67 (4). pp. 646-658. ISSN 1097-2765 (Public Dataset)
Fabian, M. R., Mathonnet, G., Sundermeier, T., Mathys, H., Zipprich, J. T., Svitkin, Y. V., Rivas, F., Jinek, M., Wohlschlegel, J., Doudna, J. A., Chen, C. Y. A., Shyu, A. B., Yates Iii, J. R., Hannon, G. J., Filipowicz, W., Duchaine, T. F., Sonenberg, N. (2009) Mammalian miRNA RISC Recruits CAF1 and PABP to Affect PABP-Dependent Deadenylation. Molecular Cell, 35 (6). pp. 868-880. ISSN 10972765 (ISSN)
Faehnle, C. R., Walleshauser, J., Joshua-Tor, L. (August 2017) Multi-domain utilization by TUT4 and TUT7 in control of let-7 biogenesis. Nat Struct Mol Biol, 24 (8). pp. 658-665. ISSN 1545-9985 (Public Dataset)
Faehnle, Christopher R., Joshua-Tor, Leemor (October 2007) Argonautes confront new small RNAs. Current Opinion in Chemical Biology, 11 (5). pp. 569-577. ISSN 1367-5931 (Print)
Fagegaltier, D., Konig, A., Gordon, A., Lai, E. C., Gingeras, T. R., Hannon, G. J., Shcherbata, H. R. (July 2014) A Genome-Wide Survey of Sexually Dimorphic Expression of Drosophila miRNAs Identifies the Steroid Hormone-Induced miRNA let-7 as a Regulator of Sexual Identity. Genetics, 198 (2). pp. 647-668. ISSN 0016-6731
Fang, Y., Spector, D. L. (May 2007) Identification of Nuclear Dicing Bodies Containing Proteins for MicroRNA Biogenesis in Living Arabidopsis Plants. Current Biology, 17 (9). pp. 818-823. ISSN 0960-9822 (Print)
Fellmann, C., Zuber, J., McJunkin, K., Chang, K. , Malone, C. D., Dickins, R. A., Xu, Q., Hengartner, M. O., Elledge, S. J., Hannon, G. J., Lowe, S. W. (March 2011) Functional Identification of Optimized RNAi Triggers Using a Massively Parallel Sensor Assay. Molecular Cell, 41 (6). pp. 733-746. ISSN 1097-2765
Forstemann, K., Tomari, Y., Du, T. T., Vagin, V. V., Denli, A. M., Bratu, D. P., Klattenhoff, C., Theurkauf, W. E., Zamore, P. D. (July 2005) Normal microRNA maturation and germ-line stem cell maintenance requires loquacious, a double-stranded RNA- binding domain protein. Plos Biology, 3 (7). pp. 1187-1201. ISSN 1544-9173
Garcia, D., Collier, S. A., Byrne, M. E., Martienssen, R. A. (May 2006) Specification of leaf polarity in Arabidopsis via the trans-acting siRNA pathway. Curr Biol, 16 (9). pp. 933-8. ISSN 0960-9822 (Print)
Genovese, G., Ergun, A., Shukla, S. A., Campos, B., Hanna, J., Ghosh, P., Quayle, S. N., Rai, K., Colla, S., Ying, H., Wu, C. J., Sarkar, S., Xiao, Y., Zhang, J., Zhang, H., Kwong, L., Dunn, K., Wiedemeyer, W. R., Brennan, C., Zheng, H., Rimm, D. L., Collins, J. J., Chin, L. (2012) microRNA regulatory network inference identifies miR-34a as a novel regulator of TGF-β signaling in glioblastoma. Cancer Discovery, 2 (8). pp. 736-749.
Gerstein, M. B., Lu, Z. J., Van Nostrand, E. L., Cheng, C., Arshinoff, B. I., Liu, T., Yip, K. Y., Robilotto, R., Rechtsteiner, A., Ikegami, K., Alves, P., Chateigner, A., Perry, M., Morris, M., Auerbach, R. K., Feng, X., Leng, J., Vielle, A., Niu, W., Rhrissorrakrai, K., Agarwal, A., Alexander, R. P., Barber, G., Brdlik, C. M., Brennan, J., Brouillet, J. J., Carr, A., Cheung, M. S., Clawson, H., Contrino, S., Dannenberg, L. O., Dernburg, A. F., Desai, A., Dick, L., Dose, A. C., Du, J. A., Egelhofer, T., Ercan, S., Euskirchen, G., Ewing, B., Feingold, E. A., Gassmann, R., Good, P. J., Green, P., Gullier, F., Gutwein, M., Guyer, M. S., Habegger, L., Han, T., Henikoff, J. G., Henz, S. R., Hinrichs, A., Holster, H., Hyman, T., Iniguez, A. L., Janette, J., Jensen, M., Kato, M., Kent, W. J., Kephart, E., Khivansara, V., Khurana, E., Kim, J. K., Kolasinska-Zwierz, P., Lai, E. C., Latorre, I., Leahey, A., Lewis, S., Lloyd, P., Lochovsky, L., Lowdon, R. F., Lubling, Y., Lyne, R., MacCoss, M., Mackowiak, S. D., Mangone, M., McKay, S. J., Mecenas, D., Merrihew, G., Miller, D. M., Muroyama, A., Murray, J. I., Ooi, S. L., Pham, H., Phippen, T., Preston, E. A., Rajewsky, N., Ratsch, G., Rosenbaum, H., Rozowsky, J., Rutherford, K., Ruzanov, P., Sarov, M., Sasidharan, R., Sboner, A., Scheid, P., Segal, E., Shin, H. J., Shou, C., Slack, F. J., Stein, L. D. (December 2010) Integrative Analysis of the Caenorhabditis elegans Genome by the modENCODE Project. Science, 330 (6012). pp. 1775-1787. ISSN 0036-8075
Girard, A., Sachidanandam, R., Hannon, G. J., Carmell, M. A. (2006) A germline-specific class of small RNAs binds mammalian Piwi proteins. Nature, 442 (7099). pp. 199-202. ISSN 00280836
Gutbrod, M. J., Martienssen, R. A. (May 2020) Conserved chromosomal functions of RNA interference. Nat Rev Genet, 21 (5). pp. 311-331. ISSN 1471-0056
Hammell, C. M. (July 2008) The microRNA-argonaute complex: a platform for mRNA modulation. RNA Biology, 5 (3). pp. 123-7. ISSN 1555-8584 (Electronic)1547-6286 (Linking)
Hammell, C. M., Karp, X., Ambros, V. (November 2009) A feedback circuit involving let-7-family miRNAs and DAF-12 integrates environmental signals and developmental timing in Caenorhabditis elegans. Proc Natl Acad Sci U S A, 106 (44). pp. 18668-73. ISSN 1091-6490 (Electronic)0027-8424 (Linking)
Hammell, C. M., Lubin, I., Boag, P. R., Blackwell, T. K., Ambros, V. (March 2009) nhl-2 Modulates microRNA activity in Caenorhabditis elegans. Cell, 136 (5). pp. 926-38. ISSN 1097-4172 (Electronic)0092-8674 (Linking)
Hammell, M. (September 2010) Computational methods to identify miRNA targets. Seminars in Cell & Developmental Biology, 21 (7). pp. 738-44. ISSN 1084-9521
Hammell, M., Long, D., Zhang, L., Lee, A., Carmack, C. S., Han, M., Ding, Y., Ambros, V. (September 2008) mirWIP: microRNA target prediction based on microRNA-containing ribonucleoprotein-enriched transcripts. Nature Methods, 5 (9). pp. 813-9. ISSN 1548-7091 (Print)1548-7091
Hauser, F., Chen, W. X., Deinlein, U., Chang, K., Ossowski, S., Fitz, J., Hannon, G. J., Schroeder, J. I. (August 2013) A Genomic-Scale Artificial MicroRNA Library as a Tool to Investigate the Functionally Redundant Gene Space in Arabidopsis. Plant Cell, 25 (8). pp. 2848-2863. ISSN 1040-4651
He, L., Hannon, G. J. (August 2004) MicroRNAs: Small RNAs with a big role in gene regulation. Nature Reviews Genetics, 5 (8). pp. 522-532. ISSN 1471-0056
He, L., He, X., Lim, L. P., De Stanchina, E., Xuan, Z., Liang, Y., Xue, W., Zender, L., Magnus, J., Ridzon, D., Jackson, A. L., Linsley, P. S., Chen, C., Lowe, S. W., Cleary, M. A., Hannon, G. J. (June 2007) A microRNA component of the p53 tumour suppressor network. Nature, 447 (7148). pp. 1130-4. ISSN 1476-4687 (Electronic)
He, L., He, X., Lowe, S. W., Hannon, G. J. (November 2007) microRNAs join the p53 network - another piece in the tumour-suppression puzzle. Nat Rev Cancer, 7 (11). pp. 819-822. ISSN 1474-1768 (Electronic)
He, L., Thomson, J. M., Hemann, M. T., Hernando-Monge, E., Mu, D., Goodson, S., Powers, S., Cordon-Cardo, C., Lowe, S. W., Hannon, G. J., Hammond, S. M. (June 2005) A microRNA polycistron as a potential human oncogene. Nature, 435 (7043). pp. 828-33. ISSN 0028-0836
He, M., Liu, Y., Wang, X., Zhang, M. Q., Hannon, G. J., Huang, Z. J. (January 2012) Cell-Type-Based Analysis of MicroRNA Profiles in the Mouse Brain. Neuron, 73 (1). pp. 35-48. ISSN 1097-4199 (Electronic)0896-6273 (Linking)
He, X., He, L., Hannon, G. J. (2007) The guardian's little helper: MicroRNAs in the p53 tumor suppressor network. Cancer Research, 67 (23). pp. 11099-11101. ISSN 00085472 (ISSN)
Holloway, A. K., Begun, D. J., Siepel, A., Pollard, K. S. (October 2008) Accelerated sequence divergence of conserved genomic elements in Drosophila melanogaster. Genome Research, 18 (10). pp. 1592-601. ISSN 1088-9051
Hong, X., Hammell, M., Ambros, V., Cohen, S. M. (September 2009) Immunopurification of Ago1 miRNPs selects for a distinct class of microRNA targets. Proceedings of the National Academy of Sciences of the United States of America, 106 (35). pp. 15085-90. ISSN 0027-8424
Ibarra, I., Erlich, Y., Muthuswamy, S. K., Sachidanandam, R., Hannon, Gregory J. (December 2007) A role for microRNAs in maintenance of mouse mammary epithelial progenitor cells. Genes Dev, 21 (24). pp. 3238-43. ISSN 0890-9369 (Print)
Italiano, A., Thomas, R., Breen, M., Zhang, L., Crago, A. M., Singer, S., Khanin, R., Maki, R. G., Mihailovic, A., Hafner, M., Tuschl, T., Antonescu, C. R. (June 2012) The miR-17-92 cluster and its target THBS1 are differentially expressed in angiosarcomas dependent on MYC amplification. Genes Chromosomes Cancer, 51 (6). pp. 569-78. ISSN 1098-2264 (Electronic)1045-2257 (Linking)
Juarez, M., Timmermans, M. (July 2004) MiRNAs specify dorsoventral polarity during leaf development. Developmental Biology, 271 (2). pp. 551-552. ISSN 0012-1606
Juarez, M. T., Kui, J. S., Thomas, J., Heller, B. A., Timmermans, M. C. (March 2004) microRNA-mediated repression of rolled leaf1 specifies maize leaf polarity. Nature, 428 (6978). pp. 84-8. ISSN 1476-4687 (Electronic)
Kang, H., Davis-Dusenbery, B. N., Nguyen, P. H., Lal, A., Lieberman, J., Van Aelst, L., Lagna, G., Hata, A. (February 2012) Bone morphogenetic protein 4 promotes vascular smooth muscle contractility by activating microRNA-21 (miR-21), which down-regulates expression of family of dedicator of cytokinesis (DOCK) proteins. Journal of Biological Chemistry, 287 (6). pp. 3976-3986. ISSN 00219258 (ISSN)
Karginov, F. V., Cheloufi, S., Chong, M. M. W., Stark, A., Smith, A. D., Hannon, G. J. (June 2010) Diverse Endonucleolytic Cleavage Sites in the Mammalian Transcriptome Depend upon MicroRNAs, Drosha, and Additional Nucleases. Molecular Cell, 38 (6). pp. 781-788. ISSN 1097-2765
Karginov, F. V., Conaco, C., Xuan, Z. Y., Schmidt, B. H., Parker, J. S., Mandel, G., Hannon, G. J. (December 2007) A biochemical approach to identifying microRNA targets. Proceedings of the National Academy of Sciences of the United States of America, 104 (49). pp. 19291-6. ISSN 0027-8424
Karginov, F. V., Hannon, G. J. (July 2013) Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates. Genes and Development, 27 (14). pp. 1624-32. ISSN 08909369 (ISSN)
Ke, J., Zhao, Z., Hong, S. H., Bai, S., He, Z., Malik, F., Xu, J., Zhou, L., Chen, W., Martin-Trevino, R., Wu, X., Lan, P., Yi, Y., Ginestier, C., Ibarra, I., Shang, L., McDermott, S., Luther, T., Clouthier, S. G., Wicha, M. S., Liu, S. (January 2015) Role of microRNA221 in regulating normal mammary epithelial hierarchy and breast cancer stem-like cells. Oncotarget, 6 (6). p. 3709. ISSN 1949-2553
Kidner, C. A., Martienssen, R. A. (January 2003) Macro effects of microRNAs in plants. Trends in Genetics, 19 (1). pp. 13-16. ISSN 0168-9525
Kidner, C. A., Martienssen, R. A. (March 2004) Spatially restricted microRNA directs leaf polarity through ARGONAUTE1. Nature, 428 (6978). pp. 81-4. ISSN 1476-4687 (Electronic)
Kidner, C. A., Martienssen, R. A. (February 2005) The developmental role of microRNA in plants. Current Opinion in Plant Biology, 8 (1). pp. 38-44. ISSN 1369-5266
Kim, J., Inoue, K., Ishii, J., Vanti, W. B., Voronov, S. V., Murchison, E., Hannon, G. J., Abeliovich, A. (August 2007) A MicroRNA feedback circuit in midbrain dopamine neurons. Science, 317 (5842). pp. 1220-4. ISSN 1095-9203 (Electronic) 1095-9203 (Linking)
Kim, Y., Wang, W. Z., Comte, I., Pastrana, E., Tran, P. B., Brown, J., Miller, R. J., Doetsch, F., Molnár, Z., Szele, F. G. (August 2010) Dopamine stimulation of postnatal murine subventricular zone neurogenesis via the D3 receptor. Journal of Neurochemistry, 114 (3). pp. 750-760.
Kinney, Brian, Sahu, Shubham, Stec, Natalia, Hills-Muckey, Kelly, Adams, Dexter W, Wang, Jing, Jaremko, Matt, Joshua-Tor, Leemor, Keil, Wolfgang, Hammell, Christopher M (August 2023) A circadian-like gene network programs the timing and dosage of heterochronic miRNA transcription during C. elegans development. Developmental Cell. S1534-5807(23)00402. ISSN 1534-5807
Knauer, S., Holt, A.L., Rubio-Somoza, I., Tucker, E. J., Hinze, A., Pisch, M., Javelle, M., Timmermans, M. C. P., Tucker, M. R., Laux, T. (January 2013) A Protodermal miR394 Signal Defines a Region of Stem Cell Competence in the Arabidopsis Shoot Meristem. Developmental Cell. ISSN 15345807
Kotagama, Kasuen, Grimme, Acadia L, Braviner, Leah, Yang, Bing, Sakhawala, Rima M, Yu, Guoyun, Benner, Lars Kristian, Joshua-Tor, Leemor, McJunkin, Katherine (January 2024) The catalytic activity of microRNA Argonautes plays a modest role in microRNA star strand destabilization in C. elegans. bioRxiv. (Submitted)
Landgraf, P., Rusu, M., Sheridan, R., Sewer, A., Iovino, N., Aravin, A. A., Pfeffer, S., Rice, A., Kamphorst, A. O., Landthaler, M., Lin, C., Socci, N. D., Hermida, L., Fulci, V., Chiaretti, S., Foa, R., Schliwka, J., Fuchs, U., Novosel, A., Muller, R. U., Schermer, B., Bissels, U., Inman, J., Phan, Q., Chien, M. C., Weir, D. B., Choksi, R., De Vita, G., Frezzetti, D., Trompeter, H. I., Hornung, V., Teng, G., Hartmann, G., Palkovits, M., Di Lauro, R., Wernet, P., Macino, G., Rogler, C. E., Nagle, J. W., Ju, J. Y., Papavasiliou, F. N., Benzing, T., Lichter, P., Tam, W., Brownstein, M. J., Bosio, A., Borkhardt, A., Russo, J. J., Sander, C., Zavolan, M., Tuschl, T. (June 2007) A mammalian microRNA expression atlas based on small RNA library sequencing. Cell, 129 (7). pp. 1401-1414. ISSN 0092-8674
Lee, S., Paulson, K. G., Murchison, E. P., Afanasiev, O. K., Alkan, C., Leonard, J. H., Byrd, D. R., Hannon, G. J., Nghiem, P. (2011) Identification and validation of a novel mature microRNA encoded by the Merkel cell polyomavirus in human Merkel cell carcinomas. Journal of Clinical Virology, 52 (3). pp. 272-275. ISSN 13866532 (ISSN)
Lee, Seung Cho, Martienssen, Robert A (January 2021) Phase separation in plant miRNA processing. Nature Cell Biology, 23 (1). pp. 5-6. ISSN 1465-7392
Lee, Young Koung, Kumari, Sunita, Olson, Andrew, Hauser, Felix, Ware, Doreen (August 2022) Role of a ZF-HD Transcription Factor in miR157-Mediated Feed-Forward Regulatory Module That Determines Plant Architecture in Arabidopsis. International Journal of Molecular Sciences, 23 (15). p. 8665. ISSN 1422-0067
Li, W., Cressy, M., Qin, H., Fulga, T., Van Vactor, D., Dubnau, J. (March 2013) MicroRNA-276a Functions in Ellipsoid Body and Mushroom Body Neurons for Naive and Conditioned Olfactory Avoidance in Drosophila. Journal of Neuroscience, 33 (13). pp. 5821-33. ISSN 1529-2401 (Electronic)0270-6474 (Linking)
Liu, J., Valencia-Sanchez, M. A., Hannon, G. J., Parker, R. (July 2005) MicroRNA-dependent localization of targeted mRNAs to mammalian P-bodies. Nature Cell Biology, 7 (7). pp. 719-23. ISSN 1465-7392
Liu, J. D., Rivas, F. V., Wohlschlegel, J., Yates, J. R., Parker, R., Hannon, G. J. (December 2005) A role for the P-body component GW182 in microRNA function. Nature Cell Biology, 7 (12). pp. 1261-1266. ISSN 1465-7392
Liu, S., Patel, S. H., Ginestier, C., Ibarra, I., Martin-Trevino, R., Bai, S., McDermott, S. P., Shang, L., Ke, J., Ou, S. J., Heath, A., Zhang, K. J., Korkaya, H., Clouthier, S. G., Charafe-Jauffret, E., Birnbaum, D., Hannon, G. J., Wicha, M. S. (2012) MicroRNA93 regulates proliferation and differentiation of normal and malignant breast stem cells. PLoS Genetics, 8 (6). ISSN 15537390 (ISSN)
Liu, Z. J., Kumari, S., Zhang, L. F., Zheng, Y. L., Ware, D. (June 2012) Characterization of miRNAs in Response to Short-Term Waterlogging in Three Inbred Lines of Zea mays. PLoS ONE, 7 (6). e39786. ISSN 1932-6203
Lu, Guang-An, Zhang, Jinning, Zhao, Yixin, Chen, Qingjian, Lin, Pei, Tang, Tian, Tang, Zhixiong, Wen, Haijun, Liufu, Zhongqi, Wu, Chung-I (January 2023) Canalization of Phenotypes-When the Transcriptome is Constantly but Weakly Perturbed. Molecular Biology and Evolution, 40 (1). msad005. ISSN 0737-4038
Maher, C., Stein, L. D., Ware, D. (April 2006) Evolution of Arabidopsis microRNA families through duplication events. Genome Res, 16 (4). pp. 510-9. ISSN 1088-9051 (Print)
Martinez, N. J., Ow, M. C., Barrasa, M. I., Hammell, M., Sequerra, R., Doucette-Stamm, L., Roth, F. P., Ambros, V. R., Walhout, A. J. (September 2008) A C. elegans genome-scale microRNA network contains composite feedback motifs with high flux capacity. Genes & Development, 22 (18). pp. 2535-49. ISSN 0890-9369 (Print)0890-9369
Mavrakis, K. J., Wolfe, A. L., Oricchio, E., Palomero, T., de Keersmaecker, K., McJunkin, K., Zuber, J., James, T., Chang, K., Khan, A. A., Leslie, C. S., Parker, J. S., Paddison, P. J., Tam, W., Ferrando, A., Wendel, H. G. (April 2010) Genome-wide RNA-mediated interference screen identifies miR-19 targets in Notch-induced T-cell acute lymphoblastic leukaemia. Nature Cell Biology, 12 (4). 372-U159. ISSN 1465-7392
May, P., Liao, W., Wu, Y., Shuai, B., McCombie, W. R., Zhang, M. Q., Liu, Q. A. (July 2013) The effects of carbon dioxide and temperature on microRNA expression in Arabidopsis development. Nature Communications, 4. ISSN 20411723
Meyers, B. C., Axtell, M. J., Bartel, B., Bartel, D. P., Baulcombe, D., Bowman, J. L., Cao, X., Carrington, J. C., Chen, X., Green, P. J., Griffiths-Jones, S., Jacobsen, S. E., Mallory, A. C., Martienssen, R. A., Poethig, R. S., Qi, Y., Vaucheret, H., Voinnet, O., Watanabe, Y., Weigel, D., Zhu, J. K. (December 2008) Criteria for annotation of plant MicroRNAs. The Plant cell, 20 (12). pp. 3186-90. ISSN 1040-4651 (Print)1040-4651 (Linking)
Mitra, R., Bandyopadhyay, S., Maulik, U., Zhang, M. Q. (January 2010) SFSSClass: an integrated approach for miRNA based tumor classification. BMC Bioinformatics, 11(S1). S22. ISSN 1471-2105
Mohammed, J., Bortolamiol-Becet, D., Flynt, A. S., Gronau, I., Siepel, A., Lai, E. C. (August 2014) Adaptive evolution of testis-specific, recently evolved, clustered miRNAs in Drosophila. RNA, 20 (8). pp. 1195-209. ISSN 1355-8382
Mohammed, J., Flynt, A. S., Panzarino, A. M., Mondal, M. M. H., DeCruz, M., Siepel, A., Lai, E. C. (January 2018) Deep experimental profiling of microRNA diversity, deployment, and evolution across the Drosophila genus. Genome Res, 28 (1). pp. 52-65. ISSN 1088-9051
Mohammed, J., Flynt, A. S., Siepel, A., Lai, E. C. (September 2013) The impact of age, biogenesis, and genomic clustering on Drosophila microRNA evolution. RNA, 19 (9). pp. 1295-308. ISSN 1355-8382
Mohammed, J., Siepel, A., Lai, E. C. (December 2014) Diverse modes of evolutionary emergence and flux of conserved microRNA clusters. RNA, 20 (12). pp. 1850-1863. ISSN 13558382
Murchison, E. P., Hannon, G. J. (June 2004) miRNAs on the move: miRNA biogenesis and the RNAi machinery. Curr Opin Cell Biol, 16 (3). pp. 223-9. ISSN 0955-0674 (Print)
Murchison, E. P., Kheradpour, P., Sachidanandam, R., Smith, C., Hodges, E., Xuan, Z., Kellis, M., Grutzner, F., Stark, A., Hannon, G. J. (June 2008) Conservation of small RNA pathways in platypus. Genome Research, 18 (6). pp. 995-1004. ISSN 1088-9051
Nogueira, F. T. S., Chitwood, D. H., Madi, S., Ohtsu, K., Schnable, P. S., Scanlon, M. J., Timmermans, M. C. P. (January 2009) Regulation of Small RNA Accumulation in the Maize Shoot Apex. Plos Genetics, 5 (1). e1000320. ISSN 1553-7390
O'Neill, K., Liao, W. W., Patel, A., Hammell, M. G. (October 2018) TEsmall Identifies Small RNAs Associated With Targeted Inhibitor Resistance in Melanoma. Frontiers in Genetics, 9. Article Number: 461 . ISSN 1664-8021
Obad, S., Dos Santos, C. O., Petri, A., Heidenblad, M., Broom, O., Ruse, C., Fu, C., Lindow, M., Stenvang, J., Straarup, E. M., Hansen, H. F., Koch, T., Pappin, D., Hannon, G. J., Kauppinen, S. (2011) Silencing of microRNA families by seed-targeting tiny LNAs. Nature Genetics, 43 (4). pp. 371-380. ISSN 10614036 (ISSN)
Olive, V., Bennett, M. J., Walker, J. C., Ma, C., Jiang, I., Cordon-Cardo, C., Li, Q. J., Lowe, S. W., Hannon, G. J., He, L. (December 2009) miR-19 is a key oncogenic component of mir-17-92. Genes & Development, 23 (24). pp. 2839-2849. ISSN 0890-9369
Perales, R., King, D. M., Aguirre-Chen, C., Hammell, C. M. (July 2014) LIN-42, the Caenorhabditis elegans PERIOD homolog, Negatively Regulates MicroRNA Transcription. PLoS Genetics, 10 (7). e1004486. ISSN 15537390 (ISSN)
Pigati, L., Yaddanapudi, S. C. S., Iyengar, R., Kim, D. J., Hearn, S. A., Danforth, D., Hastings, M. L., Duelli, D. M. (2010) Selective release of MicroRNA species from normal and malignant mammary epithelial cells. PLoS ONE, 5 (10). Artical number e13515. ISSN 19326203
Pineau, P., Volinia, S., McJunkin, K., Marchio, A., Battiston, C., Terris, B., Mazzaferro, V., Lowe, S. W., Croce, C. M., Dejean, A. (January 2010) miR-221 overexpression contributes to liver tumorigenesis. Proceedings of the National Academy of Sciences of the United States of America, 107 (1). pp. 264-269. ISSN 0027-8424
Plummer, P. N., Freeman, R., Taft, R. J., Vider, J., Sax, M., Umer, B. A., Gao, D. C., Johns, C., Mattick, J. S., Wilto, S. D., Ferro, V., McMillan, N. A. J., Swarbrick, A., Mittal, V., Mellick, A. S. (January 2013) MicroRNAs Regulate Tumor Angiogenesis Modulated by Endothelial Progenitor Cells. Cancer Research, 73 (1). pp. 341-352. ISSN 0008-5472
Png, K. J., Yoshida, M., Zhang, X. H. F., Shu, W., Lee, H., Rimner, A., Chan, T. A., Comen, E., Andrade, V. P., Kim, S. W., King, T. A., Hudis, C. A., Norton, L., Hicks, J. B., Massagué, J., Tavazoie, S. F. (February 2011) MicroRNA-335 inhibits tumor reinitiation and is silenced through genetic and epigenetic mechanisms in human breast cancer. Genes and Development, 25 (3). pp. 226-231. ISSN 08909369
Prasanth, K. V. , Camiolo, M., Chan, G., Tripathi, V., Denis, L., Nakamura, T., Hubner, M., Spector, D. L. (December 2010) Nuclear Organization and Dynamics of 7SK RNA in Regulating Gene Expression. Molecular Biology of the Cell, 21 (23). pp. 4184-4196. ISSN 1059-1524
Ramani, R., Megason, G., Schallheim, J., Karlson, C., Vijayakumar, V., Vijayakumar, S., Hicks, C. (April 2017) Integrative Analysis of MicroRNA-Mediated Gene Signatures and Pathways Modulating White Blood Cell Count in Childhood Acute Lymphoblastic Leukemia. Biomarker Insights, 12. p. 1177271917702895. ISSN 1177-2719
Ronemus, M., Vaughn, M. W., Martienssen, R. A. (July 2006) MicroRNA-targeted and small interfering RNA-mediated mRNA degradation is regulated by argonaute, dicer, and RNA-dependent RNA polymerase in Arabidopsis. Plant Cell, 18 (7). pp. 1559-74. ISSN 1040-4651 (Print)
Ryu, S., Joshi, N., McDonnell, K., Woo, J., Choi, H., Gao, D., McCombie, W. R., Mittal, V. (February 2011) Discovery of novel human breast cancer micrornas from deep sequencing data by analysis of pri-microrna secondary structures. PLoS ONE, 6 (2).
Silva, J. M., Li, M. Z., Chang, K., Ge, W., Golding, M. C., Rickles, R. J., Siolas, D., Hu, G., Paddison, P. J., Schlabach, M. R., Sheth, N., Bradshaw, J., Burchard, J., Kulkarni, A., Cavet, G., Sachidanandam, R., McCombie, W. R., Cleary, M. A., Elledge, S. J., Hannon, G. J. (November 2005) Second-generation shRNA libraries covering the mouse and human genomes. Nat Genet, 37 (11). pp. 1281-8.
Sinha, R., Allemand, E., Zhang, Z., Karni, R., Myers, M. P., Krainer, A. R. (March 2010) Arginine Methylation Controls the Subcellular Localization and Functions of the Oncoprotein Splicing Factor SF2/ASF. Molecular and Cellular Biology, 30 (11). pp. 2762-2774. ISSN 0270-7306
Skopelitis, D. S., Hill, K., Klesen, S., Marco, C. F., von Born, P., Chitwood, D. H., Timmermans, M. C. P. (August 2018) Gating of miRNA movement at defined cell-cell interfaces governs their impact as positional signals. Nat Commun, 9 (1). p. 3107. ISSN 2041-1723
Skopelitis, Damianos S., Benkovics, Anna H., Husbands, Aman Y., Timmermans, Marja C. P. (November 2017) Boundary Formation through a Direct Threshold-Based Readout of Mobile Small RNA Gradients. Developmental Cell, 43 (3). pp. 265-273. ISSN 1534-5807
Spierings, D. C., McGoldrick, D., Hamilton-Easton, A. M., Neale, G., Murchison, E. P., Hannon, G. J., Green, D. R., Withoff, S. (2011) Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage. Blood, 117 (20). pp. 5340-5349. ISSN 00064971 (ISSN)
Stahlhut, C., Slack, F. J. (July 2015) Combinatorial Action of MicroRNAs let-7 and miR-34 Effectively Synergizes with Erlotinib to Suppress Non-small Cell Lung Cancer Cell Proliferation. Cell Cycle, 14 (13). pp. 2171-80. ISSN 1551-4005 (Electronic)1551-4005 (Linking)
Stark, A., Bushati, N., Jan, C. H., Kheradpour, P., Hodges, E., Brennecke, J., Bartel, D. P., Cohen, S. M., Kellis, M. (January 2008) A single Hox locus in Drosophila produces functional microRNAs from opposite DNA strands. Genes Dev, 22 (1). pp. 8-13.
Stark, A., Kheradpour, P., Parts, L., Brennecke, J., Hodges, E., Hannon, G. J., Kellis, M. (November 2007) Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes. Genome Res, 17 (12). pp. 1865-1879.
Stark, A., Lin, M. F., Kheradpour, P., Pedersen, J. S., Parts, L., Carlson, J. W., Crosby, M. A., Rasmussen, M. D., Roy, S., Deoras, A. N., Ruby, J. G., Brennecke, J., Hodges, E., Hinrichs, A. S., Caspi, A., Park, S. W., Han, M. V., Maeder, M. L., Polansky, B. J., Robson, B. E., Aerts, S., van Helden, J., Hassan, B., Gilbert, D. G., Eastman, D. A., Rice, M., Weir, M., Hahn, M. W., Park, Y., Dewey, C. N., Pachter, L., Kent, W. J., Haussler, D., Lai, E. C., Bartel, D. P., Hannon, G. J., Kaufman, T. C., Eisen, M. B., Clark, A. G., Smith, D., Celniker, S. E., Gelbart, W. M., Kellis, M. (November 2007) Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures. Nature, 450 (7167). pp. 219-232. ISSN 0028-0836
Stark, K. L., Xu, B., Bagchi, A., Lai, W. S., Liu, H., Hsu, R., Wan, X., Pavlidis, P., Mills, A. A., Karayiorgou, M., Gogos, J. A. (June 2008) Altered brain microRNA biogenesis contributes to phenotypic deficits in a 22q11-deletion mouse model. Nat Genet, 40 (6). pp. 751-760.
Stegmeier, F., Hu, G., Rickles, R. J., Hannon, G. J., Elledge, S. J. (September 2005) A lentiviral microRNA-based system for single-copy polymerase II-regulated RNA interference in mammalian cells. Proceedings of the National Academy of Sciences of the United States of America, 102 (37). pp. 13212-13217. ISSN 0027-8424
Sun, S., Zhang, Z., Sinha, R., Karni, R., Krainer, A. R. (February 2010) SF2/ASF autoregulation involves multiple layers of post-transcriptional and translational control. Nat Struct Mol Biol, 17 (3). pp. 306-12. ISSN 1545-9985 (Electronic) 1545-9985 (Linking)
Tajima, K., Yae, T., Javaid, S., Tam, O., Comaills, V., Morris, R., Wittner, B. S., Liu, M., Engstrom, A., Takahashi, F., Black, J. C., Ramaswamy, S., Shioda, T., Hammell, M., Haber, D. A., Whetstine, J. R., Maheswaran, S. (September 2015) SETD1A modulates cell cycle progression through a miRNA network that regulates p53 target genes. Nat Commun, 6. p. 8257. ISSN 2041-1723 (Electronic)2041-1723 (Linking)
Teta, M., Choi, Y. S., Okegbe, T., Wong, G., Tam, O. H., Chong, M. M. W., Seykora, J. T., Nagy, A., Littman, D. R., Andl, T., Millar, S. E. (April 2012) Inducible deletion of epidermal Dicer and Drosha reveals multiple functions for miRNAs in postnatal skin. Development, 139 (8). pp. 1405-1416. ISSN 09501991 (ISSN)
Thiebaut, F., Grativol, C., Carnavale-Bottino, M., Rojas, C. A., Tanurdzic, M., Farinelli, L., Martienssen, R. A., Hemerly, A. S., Ferreira, P. C. (July 2012) Computational identification and analysis of novel sugarcane microRNAs. BMC genomics, 13. p. 290. ISSN 1471-2164 (Electronic)1471-2164 (Linking)
Thiebaut, F., Rojas, C. A., Grativol, C., Motta, M. R., Vieira, T., Regulski, M., Martienssen, R. A., Farinelli, L., Hemerly, A. S., Ferreira, P. C. G. (September 2014) Genome-wide identification of microRNA and siRNA responsive to endophytic beneficial diazotrophic bacteria in maize. BMC Genomics, 15. p. 766. ISSN 1471-2164
Timmermans, M. C., Juarez, M. T., Phelps-Durr, T. L. (2004) A conserved microRNA signal specifies leaf polarity. Cold Spring Harb Symp Quant Biol, 69. pp. 409-17. ISSN 0091-7451 (Print)
Tyler, D. M., Okamura, K., Chung, W. J., Hagen, J. W., Berezikov, E., Hannon, G. J., Lai, E. C. (2008) Functionally distinct regulatory RNAs generated by bidirectional transcription and processing of microRNA loci. Genes and Development, 22 (1). pp. 26-36. ISSN 08909369 (ISSN)
Uziel, T., Karginov, F. V., Xie, S. Q., Parker, J. S., Wang, Y. D., Gajjar, A., He, L., Ellison, D., Gilbertson, R. J., Hannon, G. J., Roussel, M. F. (February 2009) The miR-17 similar to 92 cluster collaborates with the Sonic Hedgehog pathway in medulloblastoma. Proceedings of the National Academy of Sciences of the United States of America, 106 (8). pp. 2812-2817. ISSN 0027-8424
Valencia-Sanchez, M. A., Liu, J., Hannon, G. J., Parker, R. (2006) Control of translation and mRNA degradation by miRNAs and siRNAs. Genes and Development, 20 (5). pp. 515-524. ISSN 08909369
Wang, X., Xuan, Z., Zhao, X., Li, Y., Zhang, M. Q. (February 2009) High-resolution human core-promoter prediction with CoreBoost_HM. Genome Res, 19 (2). pp. 266-75.
Wang, X. W., Gu, J., Zhang, M. Q., Li, Y. D. (January 2008) Identification of phylogenetically conserved microRNA cis-regulatory elements across 12 Drosophila species. Bioinformatics, 24 (2). pp. 165-171. ISSN 1367-4803
Wasik, K. A., Rebbeck, C. A. (October 2011) Keystone Symposia 40th Season: MicroRNAs and Noncoding RNAs in Cancer. Cancer Res, 71 (19). ISSN 0008-5472
Wen, J., Mohammed, J., Bortolamiol-Becet, D., Tsai, H., Robine, N., Westholm, J. O., Ladewig, E., Dai, Q., Okamura, K., Flynt, A. S., Zhang, D., Andrews, J., Cherbas, L., Kaufman, T. C., Cherbas, P., Siepel, A., Lai, E. C. (July 2014) Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines. Genome Research, 24 (7). pp. 1236-50. ISSN 1088-9051
Wu, H., Sun, S., Tu, K., Gao, Y., Xie, B., Krainer, A. R., Zhu, J. (April 2010) A Splicing-Independent Function of SF2/ASF in MicroRNA Processing. Molecular Cell, 38 (1). pp. 67-77.
Yang, J. S., Phillips, M. D., Betel, D., Mu, P., Ventura, A., Siepel, A. C., Chen, K. C., Lai, E. C. (February 2011) Widespread regulatory activity of vertebrate microRNA* species. Rna, 17 (2). pp. 312-26. ISSN 1355-8382
Zhai, J. X., Zhao, Y. Y., Simon, S. A., Huang, S., Petsch, K., Arikit, S., Pillay, M., Ji, L. J., Xie, M., Cao, X. F., Yu, B., Timmermans, M., Yang, B., Chen, X. M., Meyers, B. C. (July 2013) Plant MicroRNAs Display Differential 3 ' Truncation and Tailing Modifications That Are ARGONAUTE1 Dependent and Conserved Across Species. Plant Cell, 25 (7). pp. 2417-2428. ISSN 1040-4651
Zhang, L., Chia, J. M., Kumari, S., Stein, J. C., Liu, Z., Narechania, A., Maher, C. A., Guill, K., McMullen, M. D., Ware, D. H. (November 2009) A Genome-Wide Characterization of MicroRNA Genes in Maize. PLoS Genet, 5 (11). e1000716. ISSN 1553-7404 (Electronic)
Zhang, L., Flygare, J., Wong, P., Lim, B., Lodish, H. F. (January 2011) miR-191 regulates mouse erythroblast enucleation by down-regulating Riok3 and Mxi1. Genes Dev, 25 (2). pp. 119-24. ISSN 1549-5477 (Electronic)0890-9369 (Linking)
Zhang, L., Hammell, M., Kudlow, B. A., Ambros, V., Han, M. (September 2009) Systematic analysis of dynamic miRNA-target interactions during C. elegans development. Development, 136 (18). pp. 3043-55. ISSN 0950-1991
Zhang, L., Sankaran, V. G., Lodish, H. F. (November 2012) MicroRNAs in erythroid and megakaryocytic differentiation and megakaryocyte-erythroid progenitor lineage commitment. Leukemia, 26 (11). pp. 2310-6. ISSN 1476-5551 (Electronic)0887-6924 (Linking)
Zhang, T., Wu, Y. C., Mullane, P., Ji, Y. J., Liu, H., He, L., Arora, A., Hwang, H. Y., Alessi, A. F., Niaki, A. G., Periz, G., Guo, L., Wang, H., Elkayam, E., Joshua-Tor, L., Myong, S., Kim, J. K., Shorter, J., Ong, S. E., Leung, A. K. L., Wang, J. (March 2018) FUS Regulates Activity of MicroRNA-Mediated Gene Silencing. Mol Cell, 69 (5). 787-801.e8. ISSN 1097-2765 (Public Dataset)
Zhao, Y., Lin, P., Liufu, Z., Yang, H., Lyu, Y., Shen, X., Wu, C. I., Tang, T. (April 2018) Regulation of large number of weak targets - New insights from twin-microRNAs. Genome Biology and Evolution, 10 (5). pp. 1255-1264. ISSN 17596653 (ISSN)
Zheng, J. Y., Sachidanandam, R., Bennett, K., Bonkovsky, H. L. (October 2008) Microrna 16 Regulates Expression of the Human 5-Aminolevulinic Acid Synthase-1 (Alas 1) Gene through Targeting the Coding Region of the Gene. Hepatology, 48 (4 Supp). 1117A. ISSN 0270-9139
Zhu, K., Liu, M., Fu, Z., Zhou, Z., Kong, Y., Liang, H., Lin, Z., Luo, J., Zheng, H., Wan, P., Zhang, J., Zen, K., Chen, J., Hu, F., Zhang, C. Y., Ren, J., Chen, X. (August 2017) Plant microRNAs in larval food regulate honeybee caste development. PLoS Genet, 13 (8). e1006946. ISSN 1553-7390
Zinovyeva, A. Y., Bouasker, S., Simard, M. J., Hammell, C. M., Ambros, V. (April 2014) Mutations in Conserved Residues of the C. elegans microRNA Argonaute ALG-1 Identify Separable Functions in ALG-1 miRISC Loading and Target Repression. PLoS Genetics, 10 (4). e1004286. ISSN 1553-7404 (Electronic)1553-7390 (Linking)
Dever, T., Fox, P., Hinnebusch, A., Izaurralde, E. (September 2010) TRANSLATIONAL CONTROL. In: 2010 meeting on TRANSLATIONAL CONTROL, September 13–September 17, 2010, Cold Spring Harbor Laborator.
Kole, R., Krainer, A. R., Sullenger, B. (April 2010) RNA & OLIGONUCLEOTIDE THERAPEUTICS. In: 2010 meeting on RNA & OLIGONUCLEOTIDE THERAPEUTICS, April 7–April 10, 2010, Cold Spring Harbor.
Bibel, Brianna L (October 2021) Regulating the regulator: Phosphorylation-mediated regulation of the RNAi effector protein Argonaute. PhD thesis, Cold Spring Harbor Laboratory.
Kudla, Marek (August 2013) Quantitative description of microRNA target site occupancy in mouse embryonic stem cells and derived cells of neuronal lineage. PhD thesis, Cold Spring Harbor Laboratory.
![[up]](/style/images/multi_up.png)
Up a level