Items where Subject is "computer hardware"

Paper

Chen, B. L., Chklovskii, D. B. (April 2006) Placement and routing optimization in the brain. Proceedings of the 2006 international symposium on Physical design, 2006. pp. 136-141.

Merchant, N., Lyons, E., Goff, S., Vaughn, M., Ware, D., Micklos, D., Antin, P. (January 2016) The iPlant Collaborative: Cyberinfrastructure for Enabling Data to Discovery for the Life Sciences. PLoS Biol, 14 (1). e1002342. ISSN 1545-7885 (Electronic)1544-9173 (Linking)

Monardo, P. J., Boutell, T., Garrels, J. I., Latter, G. I. (April 1994) A distributed system for two-dimensional gel analysis. Comput Appl Biosci, 10 (2). pp. 137-43.

Neuwald, A. F., Poleksic, A. (September 2000) PSI-BLAST searches using hidden Markov models of structural repeats: prediction of an unusual sliding DNA clamp and of beta-propellers in UV-damaged DNA-binding protein. Nucleic Acids Research, 28 (18). pp. 3570-3580. ISSN 0305-1048

Schatz, M. C., Langmead, B. (July 2013) THE DNA DATA DELUGE FAST, EFFICIENT GENOME-SEQUENCING MACHINES ARE SPEWING OUT MORE DATA THAN GENETICISTS CAN ANALYZE. IEEE Spectrum, 50 (7). pp. 28-33. ISSN 0018-9235

Schatz, M. C., Trapnell, C., Delcher, A. L., Varshney, A. (2007) High-throughput sequence alignment using Graphics Processing Units. Bmc Bioinformatics, 8. ISSN 14712105 (ISSN)

Stein, L. D. (September 2008) Towards a cyberinfrastructure for the biological sciences: progress, visions and challenges. Nat Rev Genet, 9 (9). pp. 678-688.

Wang, L., Van Buren, P., Ware, D. (March 2016) Architecting a distributed bioinformatics platform with iRODS and iPlant agave API. 2015 International Conference on Computational Science and Computational Intelligence (CSCI). pp. 420-423.

Wang, Liya, Lu, Zhenyuan, Van Buren, Peter, Ware, Doreen (2022) SciApps: An Automated Platform for Processing and Distribution of Plant Genomics Data. Methods in Molecular Biology, 2443. pp. 197-209. ISSN 1064-3745

Wilbur, W. J., Neuwald, A. F. (January 2000) A theory of information with special application to search problems. Computers & Chemistry, 24 (1). pp. 33-42. ISSN 0097-8485

Book Section

Gingeras, T. R. (1983) Computers and DNA sequences: A natural combination. In: Statistical analysis of DNA sequence data. M. Dekker, New York, pp. 15-44. ISBN 9780824770327

Gingeras, T. R., Roberts, R. J. (1981) Computer assisted methods for nucleic acid sequencing. In: Genetic Engineering: Principles and Methods. Plenum Press, pp. 319-338. ISBN 9780306439193

Conference or Workshop Item

Tward, DJ, Lee, B, Mitra, P, Miller, MI (July 2017) Performance of image matching in the computational anatomy gateway: CPU and GPU implementations in opencl. In: PEARC17: Proceedings of the Practice and Experience in Advanced Research Computing 2017 on Sustainability, Success and Impact.

Video

Schatz, M. C. (November 2012) Talk from Mike Schatz at the Cold Spring Harbor Laboratory In-House Symposium (2012). [Video] (Unpublished)