Items where Community is "Lee lab"

Paper

Liu, Songlei, Punthambaker, Sukanya, Iyer, Eswar PR, Ferrante, Thomas, Goodwin, Daniel, Fürth, Daniel, Pawlowski, Andrew C, Jindal, Kunal, Tam, Jenny M, Mifflin, Lauren, Alon, Shahar, Sinha, Anubhav, Wassie, Asmamaw T, Chen, Fei, Cheng, Anne, Willocq, Valerie, Meyer, Katharina, Ling, King-Hwa, Camplisson, Conor K, Kohman, Richie E, Aach, John, Lee, Je Hyuk, Yankner, Bruce A, Boyden, Edward S, Church, George M (March 2021) Barcoded oligonucleotides ligated on RNA amplified for multiplexed and parallel in situ analyses. Nucleic Acids Research. ISSN 0305-1048

Anderson, Kristin R, Harris, Julie A, Ng, Lydia, Prins, Pjotr, Memar, Sara, Ljungquist, Bengt, Fürth, Daniel, Williams, Robert W, Ascoli, Giorgio A, Dumitriu, Dani (February 2021) Highlights from the Era of Open Source Web-Based Tools. The Journal of Neuroscience, 41 (5). pp. 927-936. ISSN 0270-6474

Choi, Jung Yoon, Jang, Hee Jae, Ornelas, Sharon, Fleming, Weston T, Fürth, Daniel, Au, Jennifer, Bandi, Akhil, Engel, Esteban A, Witten, Ilana B (December 2020) A Comparison of Dopaminergic and Cholinergic Populations Reveals Unique Contributions of VTA Dopamine Neurons to Short-Term Memory. Cell Reports, 33 (11). p. 108492. ISSN 2211-1247

Kagan, J., Moritz, R. L., Mazurchuk, R., Lee, J. H., Kharchenko, P. V., Rozenblatt-Rosen, O., Ruppin, E., Edfors, F., Ginty, F., Goltsev, Y., Wells, J. A., LaCava, J., Riesterer, J. L., Germain, R. N., Shi, T., Chee, M. S., Budnik, B. A., Yates, J. R., Chait, B. T., Moffitt, J. R., Smith, R. D., Srivastava, S. (May 2020) National Cancer Institute Think-Tank Meeting Report on Proteomic Cartography and Biomarkers at the Single-Cell Level: Interrogation of Premalignant Lesions. J Proteome Res, 19 (5). pp. 1900-1912. ISSN 1535-3893

Fürth, Daniel, Hatini, Victor, Lee, Je (August 2019) In Situ Transcriptome Accessibility Sequencing (INSTA-seq). BioRxiv. (Unpublished)

Ghosh, D., Venkataramani, P., Nandi, S., Bhattacharjee, S. (January 2019) CRISPR-Cas9 a boon or bane: the bumpy road ahead to cancer therapeutics. Cancer Cell Int, 19. p. 12. ISSN 1475-2867 (Print)1475-2867

Ghosh, D., Nandi, S., Bhattacharjee, S. (October 2018) Combination therapy to checkmate Glioblastoma: clinical challenges and advances. Clin Transl Med, 7 (1). p. 33. ISSN 2001-1326 (Print)

Chen, X., Sun, Y. C., Church, G. M., Lee, J. H., Zador, A. M. (February 2018) Efficient in situ barcode sequencing using padlock probe-based BaristaSeq. Nucleic Acids Res, 46 (4). e22. ISSN 0305-1048

Lee, J. H. (February 2018) Tracing single-cell histories. Science, 359 (6375). pp. 521-522. ISSN 0036-8075

Lee, Je H. (July 2017) De Novo Gene Expression Reconstruction in Space. Trends in Molecular Medicine, 23 (7). pp. 583-593. ISSN 1471-4914

Lee, J. H. (March 2017) Quantitative approaches for investigating the spatial context of gene expression. Wiley Interdiscip Rev Syst Biol Med, 9 (2). ISSN 1939-005X (Electronic)1939-005X (Linking)

Lee, J. H., Daugharthy, E. R., Scheiman, J., Kalhor, R., Ferrante, T. C., Terry, R., Turczyk, B. M., Yang, J. L., Lee, H. S., Aach, J., Zhang, K., Church, G. M. (March 2015) Fluorescent in situ sequencing (FISSEQ) of RNA for gene expression profiling in intact cells and tissues. Nat Protoc, 10 (3). pp. 442-58. ISSN 1750-2799

Lee, J. H., Daugharthy, E. R., Scheiman, J., Kalhor, R., Yang, J. L., Ferrante, T. C., Terry, R., Jeanty, S. S., Li, C., Amamoto, R., Peters, D. T., Turczyk, B. M., Marblestone, A. H., Inverso, S. A., Bernard, A., Mali, P., Rios, X., Aach, J., Church, G. M. (March 2014) Highly multiplexed subcellular RNA sequencing in situ. Science, 343 (6177). pp. 1360-3. ISSN 1095-9203 (Electronic)0036-8075 (Linking)

Mali, P., Aach, J., Lee, J. H., Levner, D., Nip, L., Church, G. M. (May 2013) Barcoding cells using cell-surface programmable DNA-binding domains. Nat Methods, 10 (5). pp. 403-6. ISSN 1548-7105 (Electronic)1548-7091 (Linking)

Lo, C., Liu, R., Lee, J., Robasky, K., Byrne, S., Lucchesi, C., Aach, J., Church, G., Bafna, V., Zhang, K. (2013) On the design of clone-based haplotyping. Genome Biol, 14 (9). R100. ISSN 1465-6914 (Electronic)1465-6906 (Linking)

Lee, J. H., Park, I. H., Gao, Y., Li, J. B., Li, Z., Daley, G. Q., Zhang, K., Church, G. M. (November 2009) A robust approach to identifying tissue-specific gene expression regulatory variants using personalized human induced pluripotent stem cells. PLoS Genet, 5 (11). e1000718. ISSN 1553-7404 (Electronic)1553-7390 (Linking)