O'Rawe, Jason, Fang, Han, Rynearson, Shawn, Robison, Reid J., Kiruluta, Edward S., Higgins, Gerald, Eilbeck, Karen, Reese, Martin G., Lyon, Gholson J. (August 2013) Supplemental file 9 for "Integrating precision medicine in the study and clinical treatment of a severely mentally ill person.". [Dataset] (Unpublished)
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Abstract
A list of 6 high confidence copy number variations (CNVs) that were called by the ERDS and CNAM CNV detection methods. ERDS (version 1.06.04) derived CNVs were required to be >200 kb in length, with confidence scores of >300. CNAM (Golden Helix SVS version 7.7.5) CNVs were also required to be >200kb in length with average segment LogR values of > 0.15 and < -0.15 for duplications and deletions, respectively. CNVs detected by both methods were visually inspected to eliminate obvious false positive calls. The 6 CNVs shown here were detected by each method, visually confirmed, and are thus considered high confidence.
| Item Type: | Dataset |
|---|---|
| Subjects: | Investigative techniques and equipment Investigative techniques and equipment > assays Investigative techniques and equipment > assays > whole genome sequencing |
| CSHL Authors: | |
| Communities: | CSHL labs > Lyon lab |
| Depositing User: | Matt Covey |
| Date: | 15 August 2013 |
| Date Deposited: | 28 May 2013 19:28 |
| Last Modified: | 16 Aug 2013 14:49 |
| Related URLs: | |
| URI: | https://repository.cshl.edu/id/eprint/28348 |
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