O'Rawe, Jason, Fang, Han, Rynearson, Shawn, Robison, Reid J., Kiruluta, Edward S., Higgins, Gerald, Eilbeck, Karen, Reese, Martin G., Lyon, Gholson J. (August 2013) Supplemental file 6 for "Integrating precision medicine in the study and clinical treatment of a severely mentally ill person.". [Dataset] (Unpublished)
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Abstract
Variants discovered by the Illumina CLIA WGS pipeline to have pharmacogenomic significance were evaluated and prioritized using the Omicia Opal version 1.5.0 platform. Phar-macogenomic variant prioritization was performed by importing all variants called by the Illumina CLIA WGS and bioinformatics pipe-line into the Omicia Opal cloud based variant prioritization platform. Variants were filtered by activating the “Drugs and Pharmacology” track in Opal, and further filtered to those that also had prior evidence in a variety of supporting databases, including: OMIM, HGMD, PharmGKB, LSDB and GWAS.
| Item Type: | Dataset |
|---|---|
| Subjects: | Investigative techniques and equipment Investigative techniques and equipment > assays Investigative techniques and equipment > assays > whole genome sequencing |
| CSHL Authors: | |
| Communities: | CSHL labs > Lyon lab |
| Depositing User: | Matt Covey |
| Date: | 15 August 2013 |
| Date Deposited: | 28 May 2013 19:08 |
| Last Modified: | 16 Aug 2013 14:41 |
| Related URLs: | |
| URI: | https://repository.cshl.edu/id/eprint/28345 |
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