Thorisson, G. A., Smith, A. V., Krishnan, L., Stein, L. D. (November 2005) The International HapMap Project Web site. Genome Res, 15 (11). pp. 1592-3. ISSN 1088-9051 (Print)
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Abstract
The HapMap Web site at http://www.hapmap.org is the primary portal to genotype data produced as part of the International Haplotype Map Project. In phase I of the project, >1.1 million SNPs were genotyped in 270 individuals from four worldwide populations. The HapMap Web site provides researchers with a number of tools that allow them to analyze the data as well as download data for local analyses. This paper presents step-by-step guides to using those tools, including guides for retrieving genotype and frequency data, picking tag-SNPs for use in association studies, viewing haplotypes graphically, and examining marker-to-marker LD patterns.
| Item Type: | Paper |
|---|---|
| Uncontrolled Keywords: | Computational Biology methods Databases Genetic Genome Human genetics Genomics methods Haplotypes genetics Humans Internet |
| Subjects: | bioinformatics > genomics and proteomics > databases > database construction bioinformatics > genomics and proteomics > databases > database optimization bioinformatics > genomics and proteomics > computers > computer software |
| CSHL Authors: | |
| Communities: | CSHL labs > Stein lab |
| Depositing User: | CSHL Librarian |
| Date: | November 2005 |
| Date Deposited: | 05 Jan 2012 15:29 |
| Last Modified: | 05 Jan 2012 15:29 |
| URI: | https://repository.cshl.edu/id/eprint/22720 |
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