Eilbeck, K., Lewis, S. E., Mungall, C. J., Yandell, M., Stein, L. D., Durbin, R., Ashburner, M. (2005) The Sequence Ontology: a tool for the unification of genome annotations. Genome Biology, 6 (5). R44. ISSN 1465-6914
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Abstract
The Sequence Ontology ( SO) is a structured controlled vocabulary for the parts of a genomic annotation. SO provides a common set of terms and definitions that will facilitate the exchange, analysis and management of genomic data. Because SO treats part-whole relationships rigorously, data described with it can become substrates for automated reasoning, and instances of sequence features described by the SO can be subjected to a group of logical operations termed extensional mereology operators.
| Item Type: | Paper |
|---|---|
| Uncontrolled Keywords: | DATABASE database RESOURCE BIOLOGY |
| Subjects: | bioinformatics > genomics and proteomics > databases > database construction bioinformatics > genomics and proteomics > databases > databases bioinformatics > genomics and proteomics > Mapping and Rendering > ontology |
| CSHL Authors: | |
| Communities: | CSHL labs > Stein lab |
| Depositing User: | CSHL Librarian |
| Date: | 2005 |
| Date Deposited: | 13 Jan 2012 16:32 |
| Last Modified: | 03 May 2018 15:29 |
| PMCID: | PMC1175956 |
| Related URLs: | |
| URI: | https://repository.cshl.edu/id/eprint/22559 |
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