Items where Subject is "insertion/deletion"

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Number of items at this level: 15.

A

Akagi, Keiko, Symer, David E, Mahmoud, Medhat, Jiang, Bo, Goodwin, Sara, Wangsa, Darawalee, Li, Zhengke, Xiao, Weihong, Dunn, Joe Dan, Ried, Thomas, Coombes, Kevin R, Sedlazeck, Fritz J, Gillison, Maura L (January 2023) Intratumoral heterogeneity and clonal evolution induced by HPV integration. Cancer Discovery. ISSN 2159-8274 (Public Dataset)

Andrews, Peter A., Iossifov, Ivan, Kendall, Jude, Marks, Steven, Muthuswamy, Lakshmi, Wang, Zihua, Levy, Dan, Wigler, Michael (September 2016) MUMdex: MUM-based structural variation detection. bioRxiv. 078261.

C

Carlston, Colleen, Weinmann, Robin, Stec, Natalia, Abbatemarco, Simona, Schwager, Francoise, Wang, Jing, Ouyang, Huiwu, Ewald, Collin Y, Gotta, Monica, Hammell, Christopher M (November 2021) PQN-59 antagonizes microRNA-mediated repression during post-embryonic temporal patterning and modulates translation and stress granule formation in C. elegans. PLoS Genetics, 17 (11). e1009599. ISSN 1553-7390

Chow, L. T., Broker, T. R. (March 1978) Adjacent insertion sequences IS2 and IS5 in bacteriophage Mu mutants and an IS5 in a lambda darg bacteriophage. J Bacteriol, 133 (3). pp. 1427-36. ISSN 0021-9193 (Print)0021-9193 (Linking)

F

Fang, H., Bergmann, E. A., Arora, K., Vacic, V., Zody, M. C., Iossifov, I., O'Rawe, J. A., Wu, Y., Jimenez Barron, L. T., Rosenbaum, J., Ronemus, M., Lee, Y. H., Wang, Z., Dikoglu, E., Jobanputra, V., Lyon, G. J., Wigler, M., Schatz, M. C., Narzisi, G. (December 2016) Indel variant analysis of short-read sequencing data with Scalpel. Nat Protoc, 11 (12). pp. 2529-2548. ISSN 1750-2799 (Electronic)1750-2799 (Linking)

Fang, Han, Lyon, Gholson J. (November 2014) Reducing INDEL calling errors in whole genome and exome sequencing data. In: Cold Spring Harbor Laboratory Biological Data Science Meeting, November 8, 2014, Cold Spring Harbor, NY. (Unpublished)

Fang, Han, Lyon, Gholson J. (November 2014) Reducing INDEL calling errors in whole genome and exome sequencing data. In: Cold Spring Harbor Laboratory Personal Genomes Meeting, November 2014, Cold Spring Harbor, NY . (Unpublished)

G

Ghebranious, N., Zhao, C., Ott, L., David, D., Marth, G., Sachidanadam, R., Weber, J. L. (October 2002) Human insertion/deletion (indel) polymorphisms. American Journal of Human Genetics, 71 (4). p. 461. ISSN 0002-9297

N

Narzisi, G., O'Rawe, Jason, Iossifov, I., Fang, Han, Lee, Y. H., Wang, Zihua, Wu, Yiyang, Lyon, Gholson J., Wigler, M. H., Schatz, M. C. (August 2014) Accurate de novo and transmitted indel detection in exome-capture data using microassembly. Nature Methods, 11 (10). pp. 1033-1036.

Narzisi, G., Schatz, M. C. (2015) The challenge of small-scale repeats for indel discovery. Front Bioeng Biotechnol, 3. p. 8. ISSN 2296-4185

O

Okuda, T., Valentine, M. B., Shurtleff, S. A., Hulshof, M. G., Komuro, H., Raimondi, S. C., Pui, C. H., Beach, D., Sherr, C. J., Look, A. T., Downing, J. R. (November 1994) Frequent Deletion of Ink4a/Mts1 in Pediatric Acute Lymphoblastic-Leukemia. Blood, 84 (10). A298-A298. ISSN 0006-4971

S

Stefanski, Heather E, Xing, Yan, Nicholls, Jemma, Jonart, Leslie, Goren, Emily, Taylor, Patricia A, Mills, Alea A, Riddle, Megan, McGrath, John, Tolar, Jakub, Hollander, Georg A, Blazar, Bruce R (January 2022) P63 targeted deletion under the FOXN1 promoter disrupts pre-and post-natal thymus development, function and maintenance as well as induces severe hair loss. PLoS One, 17 (1). ISSN 1932-6203

Surbhi, . , Borniger, J. C., Russart, K. L. G., Zhang, N., Magalang, U. J., Nelson, R. J. (February 2019) miR-155 deletion modulates lipopolysaccharide-induced sleep in female mice. Chronobiol Int, 36 (2). pp. 188-202. ISSN 1525-6073 (Electronic)0742-0528 (Linking)

Suzuki, Jon Y., Tripathi, Savarni, Fermín, Gustavo A., Jan, Fuh-Jyh, Hou, Shaobin, Saw, Jimmy H., Ackerman, Christine M., Yu, Qingyi, Schatz, Michael C., Pitz, Karen Y., Yépes, Marcela, Fitch, Maureen M. M., Manshardt, Richard M., Slightom, Jerry L., Ferreira, Stephen A., Salzberg, Steven L., Alam, Maqsudul, Ming, Ray, Moore, Paul H., Gonsalves, Dennis (2008) Characterization of Insertion Sites in Rainbow Papaya, the First Commercialized Transgenic Fruit Crop. Tropical Plant Biology, 1 (3-4). pp. 293-309. ISSN 1935-9756

Y

Yan, Stephanie M, Sherman, Rachel M, Taylor, Dylan J, Nair, Divya R, Bortvin, Andrew N, Schatz, Michael C, McCoy, Rajiv C (September 2021) Local adaptation and archaic introgression shape global diversity at human structural variant loci. eLife, 10. ISSN 2050-084X

This list was generated on Fri Jul 12 02:33:19 2024 EDT.
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