Items where Subject is "bioinformatics > genomics and proteomics > genetics & nucleic acid processing > DNA, RNA structure, function, modification > Chromatin dynamics > heterochromatin"

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Number of items at this level: 33.

C

Chang, An-Yun, Castel, Stephane E., Ernst, Evan, Kim, Hyun Soo, Martienssen, Robert A. (2017) The Conserved RNA Binding Cyclophilin, Rct1, Regulates Small RNA Biogenesis and Splicing Independent of Heterochromatin Assembly. Cell Reports, 19 (12). pp. 2477-2489. ISSN 2211-1247

E

Elgin, S. C. R., Haynes, K., Brower-Toland, B., Gracheva, E., Hannon, G. J., Caudy, A. A. (2005) RNAi-dependent assembly of heterochromatin in Drosophila. Faseb Journal, 19 (5). A1720-A1720. ISSN 0892-6638

G

Gendrel, A. V., Lippman, Z., Yordan, C., Colot, V., Martienssen, R. A. (2002) Dependence of heterochromatic histone H3 methylation patterns on the Arabidopsis gene DDM1. Science, 297 (5588). pp. 1871-1873. ISSN 0036-8075

Grewal, S. I. S., Elgin, S. C. (2002) Heterochromatin: new possibilities for the inheritance of structure. Current Opinion in Genetics & Development, 12 (2). pp. 178-187. ISSN 0959-437X

Grodzicker, T., Spector, D. L., Stewart, D., Stillman, B. (2010) Nuclear Organization & Function. In: Cold Spring Harbor Symposia on Quantitative Biology LXXV: Nuclear Organization and Function, June 2–June 7, 2010.

H

Hall, I. M., Shankaranarayana, G. D., Noma, K. I., Ayoub, N., Cohen, A., Grewal, S. I. S. (2002) Establishment and maintenance of a heterochromatin domain. Science, 297 (5590). pp. 2232-2237. ISSN 0036-8075

Hansen, K. R., Hazan, I., Shanker, S., Watt, S., Verhein-Hansen, J., Bahler, J., Martienssen, R. A., Partridge, J. F., Cohen, A., Thon, G. (2011) H3K9me-Independent Gene Silencing in Fission Yeast Heterochromatin by Clr5 and Histone Deacetylases. Plos Genetics, 7 (1). ISSN 1553-7390

He, H., Li, Y., Dong, Q., Chang, A. Y., Gao, F., Chi, Z., Su, M., Zhang, F., Ban, H., Martienssen, R., Chen, Y. H., Li, F. (2017) Coordinated regulation of heterochromatin inheritance by Dpb3-Dpb4 complex. Proc Natl Acad Sci U S A. ISSN 0027-8424

Huang, Y., Myers, M. P., Xu, R. M. (2006) Crystal structure of the HP1-EMSY complex reveals an unusual mode of HP1 binding. Structure, 14 (4). pp. 703-12. ISSN 0969-2126 (Print)

Huang, Z. J. (2006) GABAB receptor isoforms caught in action at the scene. Neuron, 50 (4). pp. 521-4. ISSN 0896-6273 (Print)

Huarte, M., Lan, F., Kim, T. H., Vaughn, M. W., Zaratiegui, B. M., Martienssen, R. A., Buratowski, S., Shi, Y. (2007) The fission yeast Jmj2 reverses histone H3 lysine 4 trimethylation. Journal of Biological Chemistry, 282 (30). pp. 21662-21670. ISSN 0021-9258

I

Irvine, D. V., Zaratiegui, Mi., Tolia, N. H., Goto, D. B., Chitwood, D. H., Vaughn, M. W., Joshua-Tor, L., Martienssen, R. A. (2006) Argonaute slicing is required for heterochromatic silencing and spreading. Science, 313 (5790). pp. 1134-7. ISSN 1095-9203 (Electronic)

J

Jacob, Y., Bergamin, E., Donoghue, M. T., Mongeon, V., LeBlanc, C., Voigt, P., Underwood, C. J., Brunzelle, J. S., Michaels, S. D., Reinberg, D., Couture, J. F., Martienssen, R. A. (2014) Selective methylation of histone H3 variant H3.1 regulates heterochromatin replication. Science, 343 (6176). pp. 1249-53. ISSN 0036-8075

Jacob, Y., Martienssen, R. (2012) Molecular biology. All packed up and ready to go. Science, 336 (6087). pp. 1391-1392. ISSN 0036-8075

K

Kim, T. H., Abdullaev, Z. K., Smith, A. D., Ching, K. A., Loukinov, D. I., Green, R. D., Zhang, M. Q., Lobanenkov, V. V., Ren, B. (2007) Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome. Cell, 128 (6). pp. 1231-1245. ISSN 0092-8674

Kuscu, C., Zaratiegui, M., Kim, H. S., Wah, D. A., Martienssen, R. A., Schalch, T., Joshua-Tor, L. (2014) CRL4-like Clr4 complex in Schizosaccharomyces pombe depends on an exposed surface of Dos1 for heterochromatin silencing. Proceedings of the National Academy of Sciences of the United States of America, 111 (5). pp. 1795-1800. ISSN 0027-8424

L

Lan, Fei, Zaratiegui, Mikel, Villen, Judit, Vaughn, Matthew W., Verdel, Andre, Huarte, Maite, Shi, Yujiang, Gygi, Steven P., Moazed, Danesh, Martienssen, Robert A., Shi, Yang (2007) S. pombe LSD1 homologs regulate heterochromatin propagation and euchromatic gene transcription. Mol Cell, 26 (1). pp. 89-8101. ISSN 1097-2765

Lippman, Z., Gendrel, A. V., Black, M., Vaughn, M. W., Dedhia, N., McCombie, W. R., Lavine, K., Mittal, V., May, B., Kasschau, K. D., Carrington, J. C., Doerge, R. W., Colot, V., Martienssen, R. (2004) Role of transposable elements in heterochromatin and epigenetic control. Nature, 430 (6998). pp. 471-6. ISSN 1476-4687 (Electronic)

Lippman, Z., Martienssen, R. A. (2004) The role of RNA interference in heterochromatic silencing. Nature, 431 (7006). pp. 364-70. ISSN 1476-4687 (Electronic)

Lippman, Z. B. (2004) Transposons, heterochromatin, and epigenetic landscapes in Arabidopsis thaliana. PhD thesis, Cold Spring Harbor Laboratory.

M

Martienssen, R. (2012) Reprogramming heterochromatin and its consequences in the germline. Genes & Genetic Systems, 87 (6). p. 371. ISSN 1341-7568

Martienssen, R., Moazed, D. (2015) RNAi and Heterochromatin Assembly. Cold Spring Harb Perspect Biol, 7 (8). ISSN 1943-0264 (Electronic)

Mayer, K., Schuller, C., Wambutt, R., Murphy, G., Volckaert, G., Pohl, T., Dusterhoft, A., Stiekema, W., Entian, K. D., Terryn, N., Harris, B., Ansorge, W., Brandt, P., Grivell, L., Rieger, M., Weichselgartner, M., de Simone, V., Obermaier, B., Mache, R., Muller, M., Kreis, M., Delseny, M., Puigdomenech, P., Watson, M., Schmidtheini, T., Reichert, B., Portatelle, D., Perez-Alonso, M., Boutry, M., Bancroft, I., Vos, P., Hoheisel, J., Zimmermann, W., Wedler, H., Ridley, P., Langham, S. A., McCullagh, B., Bilham, L., Robben, J., Van der Schueren, J., Grymonprez, B., Chuang, Y. J., Vandenbussche, F., Braeken, M., Weltjens, I., Voet, M., Bastiaens, I., Aert, R., Defoor, E., Weitzenegger, T., Bothe, G., Ramsperger, U., Hilbert, H., Braun, M., Holzer, E., Brandt, A., Peters, S., van Staveren, M., Dirske, W., Mooijman, P., Klein Lankhorst, R., Rose, M., Hauf, J., Kotter, P., Berneiser, S., Hempel, S., Feldpausch, M., Lamberth, S., Van den Daele, H., De Keyser, A., Buysshaert, C., Gielen, J., Villarroel, R., De Clercq, R., Van Montagu, M., Rogers, J., Cronin, A., Quail, M., Bray-Allen, S., Clark, L., Doggett, J., Hall, S., Kay, M., Lennard, N., McLay, K., Mayes, R., Pettett, A., Rajandream, M. A., Lyne, M., Benes, V., Rechmann, S., Borkova, D., Blocker, H., Scharfe, M., Grimm, M., Lohnert, T. H., Dose, S., de Haan, M., Maarse, A., Schafer, M., Müller-Auer, S., Gabel, C., Fuchs, M., Fartmann, B., Granderath, K., Dauner, D., Herzl, A., Neumann, S., Argiriou, A., Vitale, D., Liguori, R., Piravandi, E., Massenet, O., Quigley, F., Clabauld, G., Mundlein, A., Felber, R., Schnabl, S., Hiller, R., Schmidt, W., Lecharny, A., Aubourg, S., Chefdor, F., Berger, C., Montfort, A., Casacuberta, E., Gibbons, T., Weber, N., Vandenbol, M., Bargues, M., Terol, J., Perez-Perez, A., Purnelle, B., Bent, E., Johnson, S., Tacon, D., Jesse, T., Heijnen, L., Schwarz, S., Scholler, P., Heber, S., Francs, P., Bielke, C., Frishman, D., Haase, D., Lemcke, K., Mewes, H. W., Stocker, S., Zaccaria, P., Bevan, M., Wilson, R. K., de la Bastide, M., Habermann, K., Parnell, L., Dedhia, N., Gnoj, L., Schutz, K., Huang, E., Spiegel, L., Sehkon, M., Murray, J., Sheet, P., Cordes, M., Abu-Threideh, J., Stoneking, T., Kalicki, J., Graves, T., Harmon, G., Edwards, J., Latreille, P., Courtney, L., Cloud, J., Abbott, A., Scott, K., Johnson, D., Minx, P., Bentley, D., Fulton, B., Miller, N., Greco, T., Kemp, K., Kramer, J., Fulton, L., Mardis, E., Pepin, K., Hillier, L., Nelson, J., Spieth, J., Ryan, E., Andrews, S., Geisel, C., Layman, D., Du, H., Ali, J., Berghoff, A., Jones, K., Drone, K., Cotton, M., Joshu, C., Antonoiu, B., Zidanic, M., Strong, C., Sun, H., Lamar, B., Yordan, C., Ma, P., Zhong, J., Preston, R., Vil, D., Shekher, M., Matero, A., Shah, R., Swaby, I.K., O'Shaughnessy, A., Rodriguez, M., Hoffmann, J., Till, S., Granat, S., Shohdy, N., Hasegawa, A., Hameed, A., Lodhi, M., Johnson, A., Chen, E., Marra, M., Martienssen, R., McCombie, W. R. (1999) Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Nature, 402 (6763). pp. 769-77. ISSN 0028-0836 (Print)0028-0836 (Linking)

Monod, C., Aulner, N., Cuvier, O., Kas, E. (2002) Modification of position-effect variegation by competition for binding to Drosophila satellites. Embo Reports, 3 (8). pp. 747-752. ISSN 1469-221X

Murzina, N., Verreault, A., Laue, E., Stillman, B. (1999) Heterochromatin Dynamics in Mouse Cells: Interaction between Chromatin Assembly Factor 1 and HP1 Proteins. Molecular Cell, 4 (4). pp. 529-540.

N

Nakagawa, H., Lee, J. K., Hurwitz, J., Allshire, R. C., Nakayama, J., Grewal, S. I. S., Tanaka, K., Murakami, Y. (2002) Fission yeast CENP-B homologs nucleate centromeric heterochromatin by promoting heterochromatin-specific histone tail modifications. Genes & Development, 16 (14). pp. 1766-1778. ISSN 0890-9369

Narita, M., Narita, M., Krizhanovsky, V., Nunez, S., Chicas, A., Hearn, S. A., Myers, M. P., Lowe, S. W. (2006) A novel role for high-mobility group a proteins in cellular senescence and heterochromatin formation. Cell, 126 (3). pp. 503-14. ISSN 0092-8674 (Print)

Narita, M., Nunez, S., Heard, E., Narita, M., Lin, A. W., Hearn, S. A., Spector, D. L., Hannon, G. J., Lowe, S. W. (2003) Rb-mediated heterochromatin formation and silencing of E2F target genes during cellular senescence. Cell, 113 (6). pp. 703-716. ISSN 0092-8674

Noma, K., Allis, C. D., Grewal, S. I. S. (2001) Transitions in distinct histone H3 methylation patterns at the heterochromatin domain boundaries. Science, 293 (5532). pp. 1150-1155. ISSN 0036-8075

Nonaka, N., Kitajima, T., Yokobayashi, S., Xiao, G. P., Yamamoto, M., Grewal, S. I. S., Watanabe, Y. (2002) Recruitment of cohesin to heterochromatic regions by Swi6/HP1 in fission yeast. Nature Cell Biology, 4 (1). pp. 89-93. ISSN 1465-7392

R

Rossmann, M. P., Luo, W., Tsaponina, O., Chabes, A., Stillman, B. (2011) A Common Telomeric Gene Silencing Assay Is Affected by Nucleotide Metabolism. Molecular Cell, 42 (1). pp. 127-136. ISSN 1097-2765

S

Schalch, T., Job, G., Noffsinger, V. J., Shanker, S., Kuscu, C., Joshua-Tor, L., Partridge, J. F. (2009) High-affinity binding of Chp1 chromodomain to K9 methylated histone H3 is required to establish centromeric heterochromatin. Mol Cell, 34 (1). pp. 36-46. ISSN 1097-4164 (Electronic)

V

Volpe, T. A., Kidner, C., Hall, I. M., Teng, G., Grewal, S. I., Martienssen, R. A. (2002) Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi. Science, 297 (5588). pp. 1833-7. ISSN 1095-9203 (Electronic)0036-8075 (Linking)

This list was generated on Thu Nov 23 17:17:08 2017 EST.
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