Using MZEF to find internal coding exons

Zhang, M. Q. (2002) Using MZEF to find internal coding exons. Current Protocols in Bioinformatics , 4. Unit 4.2 .

URL: http://www.ncbi.nlm.nih.gov/pubmed/18792940
DOI: 10.1002/0471250953.bi0402s00

Abstract

MZEF (Michael Zhang's Exon Finder) was designed to help identify one of the most important classes of exons, i.e. the internal coding exons, in human genomic DNA sequences. It is neither for predicting intronless genes, nor for assembling predicted exons into complete gene models. There is also a mouse version (mMZEF) and an Arabidopsis version (aMZEF). This unit presents the Unix and Web versions of MZEF and reviews how to interpret the MZEF results.

Item Type: Paper
Uncontrolled Keywords: algorithm chromosome map computer program DNA sequence exon genetics methodology open reading frame review Algorithms Chromosome Mapping Exons Open Reading Frames Sequence Analysis, DNA Software
Subjects: bioinformatics
bioinformatics > genomics and proteomics > genetics & nucleic acid processing > DNA, RNA structure, function, modification
bioinformatics > genomics and proteomics > genetics & nucleic acid processing
bioinformatics > genomics and proteomics
bioinformatics > genomics and proteomics > computers > computer software
bioinformatics > genomics and proteomics > genetics & nucleic acid processing > DNA, RNA structure, function, modification > exons
CSHL Authors:
Communities: CSHL labs > Zhang lab
Depositing User: Matt Covey
Date: 2002
Date Deposited: 30 Oct 2013 19:08
Last Modified: 30 Oct 2013 19:08
Related URLs:
URI: http://repository.cshl.edu/id/eprint/28818

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