Items where Subject is "RNA regulation"

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Carlston, Colleen, Weinmann, Robin, Stec, Natalia, Abbatemarco, Simona, Schwager, Francoise, Wang, Jing, Ouyang, Huiwu, Ewald, Collin Y, Gotta, Monica, Hammell, Christopher M (November 2021) PQN-59 antagonizes microRNA-mediated repression during post-embryonic temporal patterning and modulates translation and stress granule formation in C. elegans. PLoS Genetics, 17 (11). e1009599. ISSN 1553-7390

Chang, K., Marran, K., Valentine, A., Hannon, G. J. (2013) Packaging shRNA retroviruses. Cold Spring Harbor Protocols, 2013 (8). pp. 734-737. ISSN 19403402

Cheng, H., Capponi, S., Wakeling, E., Marchi, E., Li, Q., Zhao, M., Weng, C., Stefan, P. G., Ahlfors, H., Kleyner, R., Rope, A., Lumaka, A., Lukusa, P., Devriendt, K., Vermeesch, J., Posey, J. E., Palmer, E. E., Murray, L., Leon, E., Diaz, J., Worgan, L., Mallawaarachchi, A., Vogt, J., de Munnik, S. A., Dreyer, L., Baynam, G., Ewans, L., Stark, Z., Lunke, S., Goncalves, A. R., Soares, G., Oliveira, J., Fassi, E., Willing, M., Waugh, J. L., Faivre, L., Riviere, J. B., Moutton, S., Mohammed, S., Payne, K., Walsh, L., Begtrup, A., Guillen Sacoto, M. J., Douglas, G., Alexander, N., Buckley, M. F., Mark, P. R., Ades, L. C., Sandaradura, S. A., Lupski, J. R., Roscioli, T., Agrawal, P. B., Kline, A. D., Wang, K., Timmers, H. T. M., Lyon, G. J. (October 2019) Missense variants in TAF1 and developmental phenotypes: challenges of determining pathogenicity. Hum Mutat. ISSN 1059-7794

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Das, S., Krainer, A. R. (May 2014) Emerging functions of SRSF1, splicing factor and oncoprotein, in RNA metabolism and cancer. Molecular Cancer Research, 12 (9). pp. 1195-1204. ISSN 1541-7786

Deng, X., Hiatt, J. B., Nguyen, D. K., Ercan, S., Sturgill, D., Hillier, L. W., Schlesinger, F., Davis, C. A., Reinke, V. J., Gingeras, T. R., Shendure, J., Waterston, R. H., Oliver, B., Lieb, J. D., Disteche, C. M. (2011) Balance of the x restored: evidence for compensatory upregulation of expressed X-linked genes in mammals, Caenorhabditis elegans and Drosophila melanogaster. Nature Genetics, 43 (12). pp. 1179-85. ISSN 10614036 (ISSN)

Dever, T., Fox, P., Hinnebusch, A., Izaurralde, E. (September 2010) TRANSLATIONAL CONTROL. In: 2010 meeting on TRANSLATIONAL CONTROL, September 13–September 17, 2010, Cold Spring Harbor Laborator.

dos Santos, Camila O, Dore, Louis C, Valentine, Eric, Shelat, Suresh G, Hardison, Ross C, Ghosh, Manik, Wang, Wei, Eisenstein, Richard S, Costa, Fernando F, Weiss, Mitchell J (October 2008) An iron responsive element-like stem-loop regulates alpha-hemoglobin-stabilizing protein mRNA. Journal of Biological Chemistry, 283 (40). pp. 26956-26964. ISSN 0021-9258

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Ferbeyre, G., Bourdeau, V., Pageau, M., Miramontes, P., Cedergren, R. (July 2000) Distribution of hammerhead and hammerhead-like RNA motifs through the GenBank. Genome Research, 10 (7). pp. 1011-1019. ISSN 1088-9051

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Gutbrod, Michael J. (November 2019) Chromosomal Functions of RNA Interference and Small RNAs in Early Mammalian Development. PhD thesis, Cold Spring Harbor Laboratory.

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Hammond, S. M., Bernstein, E., Beach, D., Hannon, G. J. (2000) An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells. Nature, 404 (6775). pp. 293-296. ISSN 00280836 (ISSN)

Hammond, S. M., Caudy, A. A., Hannon, G. J. (2001) Post-transcriptional gene silencing by double-stranded RNA. Nature Reviews Genetics, 2 (2). pp. 110-119. ISSN 14710056 (ISSN)

Hannon, G. E., Hannon, G. J., Maroney, P. A., Nilsen, T. W. (1994) Transcription of a nematode U1 small nuclear RNA in vitro. 3'-end formation requires cis-acting elements within the coding sequence. Journal of Biological Chemistry, 269 (17). pp. 12387-12390. ISSN 00219258 (ISSN)

Hannon, G. J., Maroney, P. A., Ayers, D. G., Shambaugh, J. D., Nilsen, T. W. (1990) Transcription of a nematode trans-spliced leader RNA require internal elements for both initiation and 3' end-formation. EMBO Journal, 9 (6). pp. 1915-1921. ISSN 02614189 (ISSN)

Huang, S., Deerinck, T. J., Ellisman, M. H. , Spector, D. L. (1998) The perinucleolar compartment and transcription. Journal of Cell Biology, 143 (1). pp. 35-47. ISSN 0021-9525

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Li, Y., Brooks, M., Yeoh-Wang, J., McCoy, R. M., Rock, T. M., Pasquino, A., Moon, C. I., Patrick, R. M., Tanurdzic, M., Ruffel, S., Widhalm, J. R., McCombie, W. R., Coruzzi, G. M. (October 2019) SDG8-mediated histone methylation and RNA processing function in the response to nitrate signaling. Plant Physiol. ISSN 0032-0889

Lu, Guang-An, Zhang, Jinning, Zhao, Yixin, Chen, Qingjian, Lin, Pei, Tang, Tian, Tang, Zhixiong, Wen, Haijun, Liufu, Zhongqi, Wu, Chung-I (January 2023) Canalization of Phenotypes-When the Transcriptome is Constantly but Weakly Perturbed. Molecular Biology and Evolution, 40 (1). msad005. ISSN 0737-4038

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Mathews, M. B. (1991) Control of Initiation by Rna Regulators. Journal of Cellular Biochemistry, 47 (Suppl ). p. 165.

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Pollard, K. S., Salama, S. R., Lambert, N., Lambot, M. A., Coppens, S., Pedersen, J. S., Katzman, S., King, B., Onodera, C., Siepel, A., Kern, A. D., Dehay, C., Igel, H., Ares, M., Vanderhaeghen, P., Haussler, D. (September 2006) An RNA gene expressed during cortical development evolved rapidly in humans. Nature, 443 (7108). pp. 167-72. ISSN 0028-0836

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Ren, J., Martienssen, R. A. (August 2012) Silent decision: HP1 protein escorts heterochromatic RNAs to their destiny. Embo Journal, 31 (15). pp. 3237-8. ISSN 0261-4189

Rigo, F., Hua, Y. M., Chun, S. J., Prakash, T. P., Krainer, A. R., Bennett, C. F. (June 2012) Synthetic oligonucleotides recruit ILF2/3 to RNA transcripts to modulate splicing. Nature Chemical Biology, 8 (6). pp. 555-561. ISSN 1552-4450

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Schuck, S., Stenlund, A. (January 2015) A conserved regulatory module at the C-terminus of the papillomavirus E1 helicase domain controls E1 helicase assembly. Journal of Virology, 89 (2). pp. 1129-1142. ISSN 0022-538x

So, M., McCarthy, B. J. (1980) Nucleotide Sequence of the Bacterial Transposon Tn-1681 Encoding a Heat Stable Toxin and Its Identification in Entero Toxigenic Escherichia-Coli Strains. Proceedings of the National Academy of Sciences of the United States of America, 77 (7). pp. 4011-4015.

Stillman, B., Stewart, D. (2006) Regulatory RNAs. Cold Spring Harb Symp Quant Biol, 71. ISSN 1943-4456 (Electronic) 0091-7451 (Linking)

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Tsaniras, S. C., Delinasios, G. J., Petropoulos, M., Panagopoulos, A., Anagnostopoulos, A. K., Villiou, M., Vlachakis, D., Bravou, V., Stathopoulos, G. T., Taraviras, S. (November 2019) DNA Replication Inhibitor Geminin and Retinoic Acid Signaling Participate in Complex Interactions Associated With Pluripotency. Cancer Genomics Proteomics, 16 (6). pp. 593-601. ISSN 1109-6535

Tyler, D. M., Okamura, K., Chung, W. J., Hagen, J. W., Berezikov, E., Hannon, G. J., Lai, E. C. (2008) Functionally distinct regulatory RNAs generated by bidirectional transcription and processing of microRNA loci. Genes and Development, 22 (1). pp. 26-36. ISSN 08909369 (ISSN)

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Uren, P. J., Bahrami-Samani, E., Burns, S. C., Qiao, M., Karginov, F. V., Hodges, E., Hannon, G. J., Sanford, J. R., Penalva, L. O. F., Smith, A. D. (2012) Site identification in high-throughput RNA-protein interaction data. Bioinformatics, 28 (23). pp. 3013-3020. ISSN 13674803 (ISSN)

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Wilusz, J. E., Jnbaptiste, C. K., Lu, L. Y., Kuhn, C. D., Joshua-Tor, L., Sharp, P. A. (November 2012) A triple helix stabilizes the 3' ends of long noncoding RNAs that lack poly(A) tails. Genes Dev, 26 (21). pp. 2392-407. ISSN 1549-5477 (Electronic)0890-9369 (Linking)

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Yang, J. S., Phillips, M. D., Betel, D., Mu, P., Ventura, A., Siepel, A. C., Chen, K. C., Lai, E. C. (February 2011) Widespread regulatory activity of vertebrate microRNA* species. Rna, 17 (2). pp. 312-26. ISSN 1355-8382