Promoter Extraction from GenBank (PEG): automatic extraction of eukaryotic promoter sequences in large sets of genes

Zhang, T., Zhang, M. (December 2001) Promoter Extraction from GenBank (PEG): automatic extraction of eukaryotic promoter sequences in large sets of genes. Bioinformatics, 17 (12). pp. 1232-1233. ISSN 1367-4803

URL: http://www.ncbi.nlm.nih.gov/pubmed/11751235
DOI: 10.1093/bioinformatics/17.12.1232

Abstract

Promoter Extraction from GenBank (PEG) extracts promoter sequences for large sets of genes using information present in GenBank. For a gene whose promoter sequence is not found, PEG will attempt to extract promoter sequences of the orthologous genes instead.

Item Type: Paper
Uncontrolled Keywords: PROTEIN
Subjects: bioinformatics > genomics and proteomics > genetics & nucleic acid processing > DNA, RNA structure, function, modification
bioinformatics > genomics and proteomics > genetics & nucleic acid processing > DNA, RNA structure, function, modification > genes, structure and function
bioinformatics > genomics and proteomics > genetics & nucleic acid processing > DNA, RNA structure, function, modification > DNA expression > promoter
Investigative techniques and equipment > assays > whole genome sequencing
CSHL Authors:
Communities: CSHL labs > Zhang lab
Depositing User: Matt Covey
Date: December 2001
Date Deposited: 15 Jan 2014 20:53
Last Modified: 15 Jan 2014 20:53
Related URLs:
URI: http://repository.cshl.edu/id/eprint/29334

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