Taking the Next Step: Building an Arabidopsis Information Portal

Baerenfaller, K., Bastow, R., Beynon, J., Brady, S., Brendel, V., Donaldson, S., Dooley, R., Forster, M., Friesner, J., Gifford, D., Grotewold, E., Gutierrez, R., Huala, E., Jaiswal, P., Joshi, H., Kersey, P., Liu, L., Loraine, A., Lyons, E., May, S., Mayer, K., MacLean, D., Meyers, B., Mueller, L., Muller, R., Muller, H. M., Ouellette, F., Pires, J. C., Provart, N., Staiger, D., Stanzione, D., Taylor, J., Taylor, C., Town, C., Toyoda, T., Vaughn, M., Walsh, S., Ware, D., Weckwerth, W., Int Arabidopsis, Informatics (June 2012) Taking the Next Step: Building an Arabidopsis Information Portal. Plant Cell, 24 (6). pp. 2248-2256. ISSN 1040-4651

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URL: http://www.ncbi.nlm.nih.gov/pubmed/22751211
DOI: 10.1105/tpc.112.100669

Abstract

The Arabidopsis Information Portal (AIP), a resource expected to provide access to all community data and combine outputs into a single user-friendly interface, has emerged from community discussions over the last 23 months. These discussions began during two closely linked workshops in early 2010 that established the International Arabidopsis Informatics Consortium (IAIC). The design of the AIP will provide core functionality while remaining flexible to encourage multiple contributors and constant innovation. An IAIC-hosted Design Workshop in December 2011 proposed a structure for the AIP to provide a framework for the minimal components of a functional community portal while retaining flexibility to rapidly extend the resource to other species. We now invite broader participation in the AIP development process so that the resource can be implemented in a timely manner.

Item Type: Paper
Uncontrolled Keywords: plant-systems biology visualization platform database thaliana genomics browser transcriptome interactome annotation
Subjects: organism description > plant > Arabidopsis
organism description > plant
CSHL Authors:
Communities: CSHL labs > Ware lab
Depositing User: Matt Covey
Date: June 2012
Date Deposited: 31 Jan 2013 21:59
Last Modified: 31 Jan 2013 22:00
PMCID: PMC3406920
Related URLs:
URI: http://repository.cshl.edu/id/eprint/26892

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