The International HapMap Project Web site

Thorisson, G. A., Smith, A. V., Krishnan, L., Stein, L. D. (November 2005) The International HapMap Project Web site. Genome Res, 15 (11). pp. 1592-3. ISSN 1088-9051 (Print)

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URL: http://www.genome.org/cgi/content/full/15/11/1592?...
DOI: 10.1101/gr.4413105

Abstract

The HapMap Web site at http://www.hapmap.org is the primary portal to genotype data produced as part of the International Haplotype Map Project. In phase I of the project, >1.1 million SNPs were genotyped in 270 individuals from four worldwide populations. The HapMap Web site provides researchers with a number of tools that allow them to analyze the data as well as download data for local analyses. This paper presents step-by-step guides to using those tools, including guides for retrieving genotype and frequency data, picking tag-SNPs for use in association studies, viewing haplotypes graphically, and examining marker-to-marker LD patterns.

Item Type: Paper
Uncontrolled Keywords: Computational Biology methods Databases Genetic Genome Human genetics Genomics methods Haplotypes genetics Humans Internet
Subjects: bioinformatics > genomics and proteomics > databases > database construction
bioinformatics > genomics and proteomics > databases > database optimization
bioinformatics > genomics and proteomics > computers > computer software
CSHL Authors:
Communities: CSHL labs > Stein lab
Depositing User: CSHL Librarian
Date: November 2005
Date Deposited: 05 Jan 2012 15:29
Last Modified: 05 Jan 2012 15:29
URI: http://repository.cshl.edu/id/eprint/22720

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