Gramene

Ware, D. H. (2007) Gramene. Methods Mol Biol, 406. pp. 315-329. ISSN 1064-3745 (Print)

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URL: https://www.ncbi.nlm.nih.gov/pubmed/18287700
DOI: 10.1007/978-1-59745-535-0_15

Abstract

Grasses are one of the largest agricultural crops, providing food, industrial materials and renewable energy sources. Due to their large genome size and the number of the species in the taxa, many of the genomes are not targeted for complete sequencing. Gramene seeks to provide basic researchers, industry and educators with a resource that can be used as a tool for knowledge discovery across grass species. This chapter briefly outlines system requirements for end users and database hosting, outlines data types and basic navigation within Gramene and provides an example of how a maize researcher would use Gramene to leverage rice genome organization and phenotypic information to support targeted experimental research in maize.

Item Type: Paper
Uncontrolled Keywords: Databases, Genetic Genome, Plant/ genetics Genomics/ methods Hordeum/genetics Information Storage and Retrieval/methods Oryza sativa/genetics Poaceae/ genetics Triticum/genetics User-Computer Interface Zea mays/genetics
Subjects: bioinformatics > genomics and proteomics > databases > database search and retrieval
bioinformatics > genomics and proteomics > databases
bioinformatics > genomics and proteomics > annotation > sequence annotation
bioinformatics > genomics and proteomics > computers > computer software
CSHL Authors:
Communities: CSHL labs > Ware lab
Depositing User: CSHL Librarian
Date: 2007
Date Deposited: 02 Sep 2011 18:43
Last Modified: 23 Feb 2017 19:29
Related URLs:
URI: http://repository.cshl.edu/id/eprint/15274

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